Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
PDGFBP01127 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
PDGFBP01127 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
PDGFBP01127 U6.112-201ENST00000384129 70 ntBASIC3.9□□□□□ -1.79
PDGFBP01127 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
PDGFBP01127 SNORA48.5-201ENST00000391143 135 ntBASIC3.9□□□□□ -1.79
PDGFBP01127 AL035405.1-201ENST00000400795 710 ntBASIC3.9□□□□□ -1.79
PDGFBP01127 SSXP10-201ENST00000402595 565 ntBASIC3.9□□□□□ -1.79
PDGFBP01127 ZNF603P-201ENST00000405613 487 ntBASIC3.9□□□□□ -1.79
PDGFBP01127 AC073264.1-201ENST00000411508 416 ntBASIC3.9□□□□□ -1.79
PDGFBP01127 AL160275.2-201ENST00000412010 394 ntBASIC3.9□□□□□ -1.79
PDGFBP01127 PGBD4P8-201ENST00000412993 562 ntBASIC3.9□□□□□ -1.79
PDGFBP01127 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.9□□□□□ -1.79
PDGFBP01127 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.9□□□□□ -1.79
PDGFBP01127 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC3.9□□□□□ -1.79
PDGFBP01127 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.9□□□□□ -1.79
PDGFBP01127 AC005300.1-201ENST00000428401 373 ntBASIC3.9□□□□□ -1.79
PDGFBP01127 HIGD1AP4-201ENST00000430194 280 ntBASIC3.9□□□□□ -1.79
PDGFBP01127 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC3.9□□□□□ -1.79
PDGFBP01127 AL591503.2-201ENST00000442314 1005 ntBASIC3.9□□□□□ -1.79
PDGFBP01127 RPS26P30-201ENST00000443431 335 ntBASIC3.9□□□□□ -1.79
PDGFBP01127 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC3.9□□□□□ -1.79
PDGFBP01127 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC3.9□□□□□ -1.79
PDGFBP01127 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.9□□□□□ -1.79
PDGFBP01127 FABP3P2-201ENST00000453169 399 ntBASIC3.9□□□□□ -1.79
PDGFBP01127 AC073387.1-201ENST00000453261 709 ntBASIC3.9□□□□□ -1.79
PDGFBP01127 RPL21P10-201ENST00000463521 490 ntBASIC3.9□□□□□ -1.79
PDGFBP01127 DEFB109F-201ENST00000491870 277 ntBASIC3.9□□□□□ -1.79
PDGFBP01127 ATP6V1G1P6-201ENST00000504007 334 ntBASIC3.9□□□□□ -1.79
PDGFBP01127 IGKV1OR2-1-201ENST00000514060 354 ntBASIC3.9□□□□□ -1.79
PDGFBP01127 PRELID3BP4-201ENST00000515476 571 ntBASIC3.9□□□□□ -1.79
PDGFBP01127 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC3.9□□□□□ -1.79
PDGFBP01127 AC090281.1-201ENST00000523019 276 ntBASIC3.9□□□□□ -1.79
PDGFBP01127 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
PDGFBP01127 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.9□□□□□ -1.79
PDGFBP01127 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC3.9□□□□□ -1.79
PDGFBP01127 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.9□□□□□ -1.79
PDGFBP01127 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.9□□□□□ -1.79
PDGFBP01127 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.9□□□□□ -1.79
PDGFBP01127 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC3.9□□□□□ -1.79
PDGFBP01127 AC010928.3-201ENST00000587712 541 ntBASIC3.9□□□□□ -1.79
PDGFBP01127 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC3.9□□□□□ -1.79
PDGFBP01127 BNIP3P39-201ENST00000601077 554 ntBASIC3.9□□□□□ -1.79
PDGFBP01127 AP002906.1-201ENST00000603405 233 ntBASIC3.9□□□□□ -1.79
PDGFBP01127 AL158050.2-201ENST00000605336 568 ntBASIC3.9□□□□□ -1.79
PDGFBP01127 AC021851.1-201ENST00000608537 1082 ntBASIC3.9□□□□□ -1.79
PDGFBP01127 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.9□□□□□ -1.79
PDGFBP01127 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.9□□□□□ -1.79
PDGFBP01127 AC009269.6-201ENST00000621778 588 ntBASIC3.9□□□□□ -1.79
PDGFBP01127 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.9□□□□□ -1.79
PDGFBP01127 AP003476.1-201ENST00000623984 516 ntBASIC3.9□□□□□ -1.79
PDGFBP01127 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC3.9□□□□□ -1.79
PDGFBP01127 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.9□□□□□ -1.79
PDGFBP01127 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
PDGFBP01127 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
PDGFBP01127 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.9□□□□□ -1.79
PDGFBP01127 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.9□□□□□ -1.79
PDGFBP01127 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
PDGFBP01127 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
PDGFBP01127 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.9□□□□□ -1.79
PDGFBP01127 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
PDGFBP01127 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.89□□□□□ -1.79
PDGFBP01127 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
PDGFBP01127 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.89□□□□□ -1.79
PDGFBP01127 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
PDGFBP01127 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
PDGFBP01127 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.89□□□□□ -1.79
PDGFBP01127 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PDGFBP01127 Y_RNA.510-201ENST00000384511 114 ntBASIC3.89□□□□□ -1.79
PDGFBP01127 MIR195-201ENST00000385194 87 ntBASIC3.89□□□□□ -1.79
PDGFBP01127 AL603865.2-201ENST00000401679 213 ntBASIC3.89□□□□□ -1.79
PDGFBP01127 TMSB4XP8-201ENST00000402089 135 ntBASIC3.89□□□□□ -1.79
PDGFBP01127 MIR1251-201ENST00000408552 70 ntBASIC3.89□□□□□ -1.79
PDGFBP01127 VN1R51P-201ENST00000411675 945 ntBASIC3.89□□□□□ -1.79
PDGFBP01127 UBE2V1P9-201ENST00000414760 368 ntBASIC3.89□□□□□ -1.79
PDGFBP01127 TMSB4XP6-201ENST00000415187 135 ntBASIC3.89□□□□□ -1.79
PDGFBP01127 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.89□□□□□ -1.79
PDGFBP01127 PAICSP7-201ENST00000419829 962 ntBASIC3.89□□□□□ -1.79
PDGFBP01127 TMSB4XP1-201ENST00000424567 135 ntBASIC3.89□□□□□ -1.79
PDGFBP01127 AC005517.2-201ENST00000424673 553 ntBASIC3.89□□□□□ -1.79
PDGFBP01127 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.89□□□□□ -1.79
PDGFBP01127 AL009174.1-201ENST00000426577 416 ntBASIC3.89□□□□□ -1.79
PDGFBP01127 AC005326.1-201ENST00000429197 123 ntBASIC3.89□□□□□ -1.79
PDGFBP01127 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.89□□□□□ -1.79
PDGFBP01127 AC011242.1-201ENST00000433596 1158 ntBASIC3.89□□□□□ -1.79
PDGFBP01127 SDR42E1P3-201ENST00000438345 502 ntBASIC3.89□□□□□ -1.79
PDGFBP01127 AL138799.3-201ENST00000438968 350 ntBASIC3.89□□□□□ -1.79
PDGFBP01127 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC3.89□□□□□ -1.79
PDGFBP01127 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC3.89□□□□□ -1.79
PDGFBP01127 RANP8-201ENST00000444720 713 ntBASIC3.89□□□□□ -1.79
PDGFBP01127 RPS15AP1-201ENST00000457423 391 ntBASIC3.89□□□□□ -1.79
PDGFBP01127 RPL21P11-201ENST00000461458 483 ntBASIC3.89□□□□□ -1.79
PDGFBP01127 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC3.89□□□□□ -1.79
PDGFBP01127 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PDGFBP01127 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.89□□□□□ -1.79
PDGFBP01127 RNU2-58P-201ENST00000516403 183 ntBASIC3.89□□□□□ -1.79
PDGFBP01127 IGKV2-38-201ENST00000517443 247 ntBASIC3.89□□□□□ -1.79
PDGFBP01127 PHBP17-201ENST00000528576 541 ntBASIC3.89□□□□□ -1.79
PDGFBP01127 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.89□□□□□ -1.79
PDGFBP01127 RFPL1S-203ENST00000539579 330 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms