Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
CLPTM1O96005 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
CLPTM1O96005 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
CLPTM1O96005 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
CLPTM1O96005 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.87□□□□□ -1.79
CLPTM1O96005 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CLPTM1O96005 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.87□□□□□ -1.79
CLPTM1O96005 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CLPTM1O96005 PRO1804-201ENST00000623780 2050 ntBASIC3.86□□□□□ -1.79
CLPTM1O96005 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.86□□□□□ -1.79
CLPTM1O96005 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.86□□□□□ -1.79
CLPTM1O96005 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
CLPTM1O96005 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
CLPTM1O96005 RNA5SP447-201ENST00000363749 119 ntBASIC3.86□□□□□ -1.79
CLPTM1O96005 RNU6-619P-201ENST00000365146 108 ntBASIC3.86□□□□□ -1.79
CLPTM1O96005 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
CLPTM1O96005 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC3.86□□□□□ -1.79
CLPTM1O96005 RAP1BP1-201ENST00000412709 553 ntBASIC3.86□□□□□ -1.79
CLPTM1O96005 FAR2P2-201ENST00000413041 594 ntBASIC3.86□□□□□ -1.79
CLPTM1O96005 NRBF2P2-201ENST00000413087 861 ntBASIC3.86□□□□□ -1.79
CLPTM1O96005 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC3.86□□□□□ -1.79
CLPTM1O96005 AC127526.1-201ENST00000417526 366 ntBASIC3.86□□□□□ -1.79
CLPTM1O96005 AL159169.1-201ENST00000421119 127 ntBASIC3.86□□□□□ -1.79
CLPTM1O96005 RPS27AP7-201ENST00000422792 455 ntBASIC3.86□□□□□ -1.79
CLPTM1O96005 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.86□□□□□ -1.79
CLPTM1O96005 AC093155.1-201ENST00000440164 826 ntBASIC3.86□□□□□ -1.79
CLPTM1O96005 AC114495.1-201ENST00000441274 436 ntBASIC3.86□□□□□ -1.79
CLPTM1O96005 H2AFZP6-201ENST00000444403 394 ntBASIC3.86□□□□□ -1.79
CLPTM1O96005 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC3.86□□□□□ -1.79
CLPTM1O96005 AC104978.1-201ENST00000449387 391 ntBASIC3.86□□□□□ -1.79
CLPTM1O96005 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC3.86□□□□□ -1.79
CLPTM1O96005 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC3.86□□□□□ -1.79
CLPTM1O96005 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC3.86□□□□□ -1.79
CLPTM1O96005 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC3.86□□□□□ -1.79
CLPTM1O96005 RN7SL812P-201ENST00000493791 279 ntBASIC3.86□□□□□ -1.79
CLPTM1O96005 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CLPTM1O96005 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CLPTM1O96005 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CLPTM1O96005 AC010285.3-201ENST00000511668 676 ntBASIC3.86□□□□□ -1.79
CLPTM1O96005 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CLPTM1O96005 MTCO1P30-201ENST00000515244 580 ntBASIC3.86□□□□□ -1.79
CLPTM1O96005 RNU6-1231P-201ENST00000517185 103 ntBASIC3.86□□□□□ -1.79
CLPTM1O96005 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC3.86□□□□□ -1.79
CLPTM1O96005 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC3.86□□□□□ -1.79
CLPTM1O96005 C1GALT1P3-201ENST00000522049 819 ntBASIC3.86□□□□□ -1.79
CLPTM1O96005 OSBPL9P2-201ENST00000526582 1228 ntBASIC3.86□□□□□ -1.79
CLPTM1O96005 AP000926.4-201ENST00000527351 454 ntBASIC3.86□□□□□ -1.79
CLPTM1O96005 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC3.86□□□□□ -1.79
CLPTM1O96005 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC3.86□□□□□ -1.79
CLPTM1O96005 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.86□□□□□ -1.79
CLPTM1O96005 AL442163.2-201ENST00000553912 710 ntBASIC3.86□□□□□ -1.79
CLPTM1O96005 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC3.86□□□□□ -1.79
CLPTM1O96005 NBEAP1-201ENST00000554452 979 ntBASIC3.86□□□□□ -1.79
CLPTM1O96005 AL109766.1-201ENST00000555080 552 ntBASIC3.86□□□□□ -1.79
CLPTM1O96005 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC3.86□□□□□ -1.79
CLPTM1O96005 AL133457.1-201ENST00000564251 987 ntBASIC3.86□□□□□ -1.79
CLPTM1O96005 AC099489.2-201ENST00000574976 260 ntBASIC3.86□□□□□ -1.79
CLPTM1O96005 AC006270.2-201ENST00000578523 652 ntBASIC3.86□□□□□ -1.79
CLPTM1O96005 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.86□□□□□ -1.79
CLPTM1O96005 AC115286.1-201ENST00000604298 434 ntBASIC3.86□□□□□ -1.79
CLPTM1O96005 AL390816.3-201ENST00000604527 1066 ntBASIC3.86□□□□□ -1.79
CLPTM1O96005 AL391261.4-201ENST00000616012 481 ntBASIC3.86□□□□□ -1.79
CLPTM1O96005 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC3.86□□□□□ -1.79
CLPTM1O96005 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC3.86□□□□□ -1.79
CLPTM1O96005 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC3.86□□□□□ -1.79
CLPTM1O96005 AC007490.1-201ENST00000624321 703 ntBASIC3.86□□□□□ -1.79
CLPTM1O96005 MIR7641-1-201ENST00000627518 61 ntBASIC3.86□□□□□ -1.79
CLPTM1O96005 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.86□□□□□ -1.79
CLPTM1O96005 CDRT1-208ENST00000630868 794 ntBASIC3.86□□□□□ -1.79
CLPTM1O96005 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
CLPTM1O96005 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CLPTM1O96005 ASNSP1-204ENST00000641977 1664 ntBASIC3.86□□□□□ -1.79
CLPTM1O96005 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.86□□□□□ -1.79
CLPTM1O96005 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.86□□□□□ -1.79
CLPTM1O96005 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CLPTM1O96005 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CLPTM1O96005 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
CLPTM1O96005 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
CLPTM1O96005 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC3.85□□□□□ -1.79
CLPTM1O96005 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
CLPTM1O96005 CR381670.1-201ENST00000624291 1693 ntBASIC3.85□□□□□ -1.79
CLPTM1O96005 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.85□□□□□ -1.79
CLPTM1O96005 ATP5F1P4-201ENST00000397288 746 ntBASIC3.85□□□□□ -1.79
CLPTM1O96005 MIR1179-201ENST00000408703 91 ntBASIC3.85□□□□□ -1.79
CLPTM1O96005 AC016397.1-201ENST00000412463 242 ntBASIC3.85□□□□□ -1.79
CLPTM1O96005 AC006960.1-201ENST00000419980 153 ntBASIC3.85□□□□□ -1.79
CLPTM1O96005 AL365338.1-201ENST00000422282 858 ntBASIC3.85□□□□□ -1.79
CLPTM1O96005 AC011233.1-201ENST00000422812 283 ntBASIC3.85□□□□□ -1.79
CLPTM1O96005 EIF1P3-201ENST00000423841 334 ntBASIC3.85□□□□□ -1.79
CLPTM1O96005 DPRXP1-201ENST00000426312 460 ntBASIC3.85□□□□□ -1.79
CLPTM1O96005 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.85□□□□□ -1.79
CLPTM1O96005 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC3.85□□□□□ -1.79
CLPTM1O96005 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC3.85□□□□□ -1.79
CLPTM1O96005 SETP8-201ENST00000435341 628 ntBASIC3.85□□□□□ -1.79
CLPTM1O96005 AL138799.3-201ENST00000438968 350 ntBASIC3.85□□□□□ -1.79
CLPTM1O96005 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.85□□□□□ -1.79
CLPTM1O96005 AL133217.1-201ENST00000450980 425 ntBASIC3.85□□□□□ -1.79
CLPTM1O96005 AC009220.1-201ENST00000451614 275 ntBASIC3.85□□□□□ -1.79
CLPTM1O96005 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC3.85□□□□□ -1.79
CLPTM1O96005 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms