Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 MIR6820-201ENST00000611508 62 ntBASIC5.83□□□□□ -1.48
VAMP4O75379 AL359314.1-201ENST00000616913 261 ntBASIC5.83□□□□□ -1.48
VAMP4O75379 CR381653.2-201ENST00000624041 768 ntBASIC5.83□□□□□ -1.48
VAMP4O75379 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC5.83□□□□□ -1.48
VAMP4O75379 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
VAMP4O75379 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC5.83□□□□□ -1.48
VAMP4O75379 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
VAMP4O75379 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.83□□□□□ -1.48
VAMP4O75379 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
VAMP4O75379 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
VAMP4O75379 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
VAMP4O75379 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.82□□□□□ -1.48
VAMP4O75379 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
VAMP4O75379 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
VAMP4O75379 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC5.82□□□□□ -1.48
VAMP4O75379 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC5.82□□□□□ -1.48
VAMP4O75379 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
VAMP4O75379 RNU6-178P-201ENST00000384631 104 ntBASIC5.82□□□□□ -1.48
VAMP4O75379 RNU6-297P-201ENST00000384636 107 ntBASIC5.82□□□□□ -1.48
VAMP4O75379 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
VAMP4O75379 SNORA40.3-201ENST00000390964 122 ntBASIC5.82□□□□□ -1.48
VAMP4O75379 RPS24P12-201ENST00000402084 394 ntBASIC5.82□□□□□ -1.48
VAMP4O75379 AGR3-202ENST00000402239 563 ntTSL 2 BASIC5.82□□□□□ -1.48
VAMP4O75379 AL450338.1-201ENST00000407987 512 ntBASIC5.82□□□□□ -1.48
VAMP4O75379 MIR1271-201ENST00000408537 86 ntBASIC5.82□□□□□ -1.48
VAMP4O75379 HMGB3P23-201ENST00000414981 585 ntBASIC5.82□□□□□ -1.48
VAMP4O75379 AIMP1P1-201ENST00000418670 937 ntBASIC5.82□□□□□ -1.48
VAMP4O75379 AL139095.3-201ENST00000419672 1203 ntBASIC5.82□□□□□ -1.48
VAMP4O75379 MTCO3P1-205ENST00000422088 832 ntBASIC5.82□□□□□ -1.48
VAMP4O75379 AC245028.1-201ENST00000423259 256 ntBASIC5.82□□□□□ -1.48
VAMP4O75379 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC5.82□□□□□ -1.48
VAMP4O75379 VDAC1P6-201ENST00000430062 855 ntBASIC5.82□□□□□ -1.48
VAMP4O75379 AL450263.2-201ENST00000439400 589 ntBASIC5.82□□□□□ -1.48
VAMP4O75379 ARL2BPP10-201ENST00000446487 531 ntBASIC5.82□□□□□ -1.48
VAMP4O75379 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.82□□□□□ -1.48
VAMP4O75379 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC5.82□□□□□ -1.48
VAMP4O75379 AL162591.2-201ENST00000449634 317 ntBASIC5.82□□□□□ -1.48
VAMP4O75379 RPL21P71-201ENST00000465598 459 ntBASIC5.82□□□□□ -1.48
VAMP4O75379 RPL23AP12-201ENST00000467573 473 ntBASIC5.82□□□□□ -1.48
VAMP4O75379 RN7SL346P-201ENST00000491561 294 ntBASIC5.82□□□□□ -1.48
VAMP4O75379 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC5.82□□□□□ -1.48
VAMP4O75379 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC5.82□□□□□ -1.48
VAMP4O75379 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC5.82□□□□□ -1.48
VAMP4O75379 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC5.82□□□□□ -1.48
VAMP4O75379 MIR4715-201ENST00000584117 79 ntBASIC5.82□□□□□ -1.48
VAMP4O75379 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC5.82□□□□□ -1.48
VAMP4O75379 RPL12P25-202ENST00000598100 674 ntBASIC5.82□□□□□ -1.48
VAMP4O75379 AC090578.1-201ENST00000604955 591 ntBASIC5.82□□□□□ -1.48
VAMP4O75379 uc_338.9-201ENST00000617424 182 ntBASIC5.82□□□□□ -1.48
VAMP4O75379 AL139089.1-201ENST00000620372 975 ntBASIC5.82□□□□□ -1.48
VAMP4O75379 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC5.82□□□□□ -1.48
VAMP4O75379 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC5.82□□□□□ -1.48
VAMP4O75379 CDRT1-208ENST00000630868 794 ntBASIC5.82□□□□□ -1.48
VAMP4O75379 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
VAMP4O75379 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
VAMP4O75379 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
VAMP4O75379 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
VAMP4O75379 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
VAMP4O75379 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.82□□□□□ -1.48
VAMP4O75379 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
VAMP4O75379 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.82□□□□□ -1.48
VAMP4O75379 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
VAMP4O75379 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.81□□□□□ -1.48
VAMP4O75379 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
VAMP4O75379 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.81□□□□□ -1.48
VAMP4O75379 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
VAMP4O75379 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
VAMP4O75379 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.81□□□□□ -1.48
VAMP4O75379 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.81□□□□□ -1.48
VAMP4O75379 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
VAMP4O75379 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
VAMP4O75379 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
VAMP4O75379 RNU1-130P-201ENST00000363930 160 ntBASIC5.81□□□□□ -1.48
VAMP4O75379 Y_RNA.303-201ENST00000364998 94 ntBASIC5.81□□□□□ -1.48
VAMP4O75379 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC5.81□□□□□ -1.48
VAMP4O75379 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
VAMP4O75379 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
VAMP4O75379 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
VAMP4O75379 RPL37P21-201ENST00000435890 276 ntBASIC5.81□□□□□ -1.48
VAMP4O75379 MTCO3P18-201ENST00000440206 761 ntBASIC5.81□□□□□ -1.48
VAMP4O75379 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC5.81□□□□□ -1.48
VAMP4O75379 MTATP6P30-201ENST00000443540 664 ntBASIC5.81□□□□□ -1.48
VAMP4O75379 AC112653.1-201ENST00000443851 386 ntBASIC5.81□□□□□ -1.48
VAMP4O75379 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC5.81□□□□□ -1.48
VAMP4O75379 AC243772.1-201ENST00000451620 410 ntBASIC5.81□□□□□ -1.48
VAMP4O75379 AC091564.1-201ENST00000464563 479 ntBASIC5.81□□□□□ -1.48
VAMP4O75379 AL121769.1-201ENST00000469473 401 ntBASIC5.81□□□□□ -1.48
VAMP4O75379 AC025674.1-201ENST00000507074 324 ntBASIC5.81□□□□□ -1.48
VAMP4O75379 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC5.81□□□□□ -1.48
VAMP4O75379 AC074344.1-201ENST00000512823 224 ntBASIC5.81□□□□□ -1.48
VAMP4O75379 AC108471.1-201ENST00000513977 287 ntBASIC5.81□□□□□ -1.48
VAMP4O75379 RNA5SP228-201ENST00000516232 133 ntBASIC5.81□□□□□ -1.48
VAMP4O75379 PAICSP4-201ENST00000517543 1253 ntBASIC5.81□□□□□ -1.48
VAMP4O75379 AL121579.1-201ENST00000555129 305 ntBASIC5.81□□□□□ -1.48
VAMP4O75379 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.81□□□□□ -1.48
VAMP4O75379 CYCSP2-201ENST00000558168 301 ntBASIC5.81□□□□□ -1.48
VAMP4O75379 MIR4472-2-201ENST00000582069 67 ntBASIC5.81□□□□□ -1.48
VAMP4O75379 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC5.81□□□□□ -1.48
VAMP4O75379 VN1R84P-201ENST00000593697 235 ntBASIC5.81□□□□□ -1.48
VAMP4O75379 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 124.1 ms