Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 MIR4646-201ENST00000580775 63 ntBASIC3.8□□□□□ -1.8
SNX3O60493 AC107982.3-201ENST00000584957 985 ntBASIC3.8□□□□□ -1.8
SNX3O60493 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SNX3O60493 KLKP1-201ENST00000595979 403 ntBASIC3.8□□□□□ -1.8
SNX3O60493 AL390838.2-201ENST00000602394 274 ntBASIC3.8□□□□□ -1.8
SNX3O60493 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.8□□□□□ -1.8
SNX3O60493 AC091946.2-201ENST00000606105 291 ntBASIC3.8□□□□□ -1.8
SNX3O60493 SDR42E1P1-201ENST00000611327 477 ntBASIC3.8□□□□□ -1.8
SNX3O60493 AC068722.2-201ENST00000618734 544 ntBASIC3.8□□□□□ -1.8
SNX3O60493 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.8□□□□□ -1.8
SNX3O60493 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
SNX3O60493 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SNX3O60493 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SNX3O60493 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SNX3O60493 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
SNX3O60493 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.8□□□□□ -1.8
SNX3O60493 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SNX3O60493 PNPT1P2-201ENST00000456768 2050 ntBASIC3.79□□□□□ -1.8
SNX3O60493 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SNX3O60493 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
SNX3O60493 RNU6-560P-201ENST00000364007 108 ntBASIC3.79□□□□□ -1.8
SNX3O60493 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SNX3O60493 RNU6-657P-201ENST00000383904 107 ntBASIC3.79□□□□□ -1.8
SNX3O60493 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SNX3O60493 RNA5SP80-201ENST00000410475 111 ntBASIC3.79□□□□□ -1.8
SNX3O60493 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.79□□□□□ -1.8
SNX3O60493 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SNX3O60493 PSMA2P3-201ENST00000429685 675 ntBASIC3.79□□□□□ -1.8
SNX3O60493 RPS6P12-201ENST00000432491 726 ntBASIC3.79□□□□□ -1.8
SNX3O60493 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC3.79□□□□□ -1.8
SNX3O60493 AC004022.1-201ENST00000447766 1066 ntBASIC3.79□□□□□ -1.8
SNX3O60493 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC3.79□□□□□ -1.8
SNX3O60493 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.79□□□□□ -1.8
SNX3O60493 OFD1P3Y-201ENST00000453312 783 ntBASIC3.79□□□□□ -1.8
SNX3O60493 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.79□□□□□ -1.8
SNX3O60493 RPL5P24-201ENST00000463742 885 ntBASIC3.79□□□□□ -1.8
SNX3O60493 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SNX3O60493 AC013828.1-201ENST00000481845 158 ntBASIC3.79□□□□□ -1.8
SNX3O60493 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SNX3O60493 RNU6-1261P-201ENST00000517194 104 ntBASIC3.79□□□□□ -1.8
SNX3O60493 AC027309.2-201ENST00000520566 192 ntBASIC3.79□□□□□ -1.8
SNX3O60493 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.79□□□□□ -1.8
SNX3O60493 AC005832.3-201ENST00000537929 631 ntBASIC3.79□□□□□ -1.8
SNX3O60493 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.79□□□□□ -1.8
SNX3O60493 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.79□□□□□ -1.8
SNX3O60493 AC090502.2-201ENST00000549267 280 ntBASIC3.79□□□□□ -1.8
SNX3O60493 MTND4P33-201ENST00000556706 766 ntBASIC3.79□□□□□ -1.8
SNX3O60493 AL132657.2-201ENST00000564417 358 ntBASIC3.79□□□□□ -1.8
SNX3O60493 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.79□□□□□ -1.8
SNX3O60493 BNIP3P26-201ENST00000600827 554 ntBASIC3.79□□□□□ -1.8
SNX3O60493 AC091057.2-201ENST00000602594 792 ntBASIC3.79□□□□□ -1.8
SNX3O60493 AC010680.3-201ENST00000604215 520 ntBASIC3.79□□□□□ -1.8
SNX3O60493 AC115621.1-201ENST00000604653 858 ntBASIC3.79□□□□□ -1.8
SNX3O60493 AC013244.3-201ENST00000605614 388 ntBASIC3.79□□□□□ -1.8
SNX3O60493 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.79□□□□□ -1.8
SNX3O60493 AC005332.6-201ENST00000613178 446 ntBASIC3.79□□□□□ -1.8
SNX3O60493 MIR7155-201ENST00000615925 56 ntBASIC3.79□□□□□ -1.8
SNX3O60493 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC3.79□□□□□ -1.8
SNX3O60493 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SNX3O60493 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.79□□□□□ -1.8
SNX3O60493 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
SNX3O60493 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SNX3O60493 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.78□□□□□ -1.8
SNX3O60493 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC3.78□□□□□ -1.8
SNX3O60493 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
SNX3O60493 SAGE4P-201ENST00000442271 3381 ntBASIC3.78□□□□□ -1.8
SNX3O60493 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
SNX3O60493 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.78□□□□□ -1.8
SNX3O60493 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.78□□□□□ -1.8
SNX3O60493 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
SNX3O60493 RPS26P8-201ENST00000393490 348 ntBASIC3.78□□□□□ -1.8
SNX3O60493 AL590084.1-201ENST00000407885 387 ntBASIC3.78□□□□□ -1.8
SNX3O60493 ELOCP9-201ENST00000418624 239 ntBASIC3.78□□□□□ -1.8
SNX3O60493 AL159169.1-201ENST00000421119 127 ntBASIC3.78□□□□□ -1.8
SNX3O60493 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.78□□□□□ -1.8
SNX3O60493 SDCBPP2-201ENST00000424643 885 ntBASIC3.78□□□□□ -1.8
SNX3O60493 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SNX3O60493 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC3.78□□□□□ -1.8
SNX3O60493 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC3.78□□□□□ -1.8
SNX3O60493 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.78□□□□□ -1.8
SNX3O60493 TEX41-205ENST00000431734 529 ntTSL 4 BASIC3.78□□□□□ -1.8
SNX3O60493 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.78□□□□□ -1.8
SNX3O60493 ZNF736P8Y-201ENST00000451913 669 ntBASIC3.78□□□□□ -1.8
SNX3O60493 AC104073.1-201ENST00000451988 151 ntBASIC3.78□□□□□ -1.8
SNX3O60493 MTCO3P2-201ENST00000457365 171 ntBASIC3.78□□□□□ -1.8
SNX3O60493 RPL38P1-201ENST00000460914 211 ntBASIC3.78□□□□□ -1.8
SNX3O60493 RPS3AP41-201ENST00000462701 778 ntBASIC3.78□□□□□ -1.8
SNX3O60493 AL136126.1-201ENST00000473603 402 ntBASIC3.78□□□□□ -1.8
SNX3O60493 AC010301.1-201ENST00000473936 355 ntBASIC3.78□□□□□ -1.8
SNX3O60493 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC3.78□□□□□ -1.8
SNX3O60493 RPL21P103-201ENST00000479921 488 ntBASIC3.78□□□□□ -1.8
SNX3O60493 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.78□□□□□ -1.8
SNX3O60493 RNF138P1-201ENST00000502765 546 ntBASIC3.78□□□□□ -1.8
SNX3O60493 OR5M14P-201ENST00000506803 618 ntBASIC3.78□□□□□ -1.8
SNX3O60493 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.78□□□□□ -1.8
SNX3O60493 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.78□□□□□ -1.8
SNX3O60493 NDUFB9P3-201ENST00000521269 501 ntBASIC3.78□□□□□ -1.8
SNX3O60493 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SNX3O60493 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.78□□□□□ -1.8
SNX3O60493 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 162.1 ms