Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 OR2B8P-201ENST00000432841 938 ntBASIC3.65□□□□□ -1.83
PDLIM1O00151 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.65□□□□□ -1.83
PDLIM1O00151 AL356276.2-201ENST00000435919 558 ntBASIC3.65□□□□□ -1.83
PDLIM1O00151 AC234064.1-201ENST00000436312 247 ntBASIC3.65□□□□□ -1.83
PDLIM1O00151 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC3.65□□□□□ -1.83
PDLIM1O00151 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
PDLIM1O00151 SLC31A1P1-201ENST00000451221 567 ntBASIC3.65□□□□□ -1.83
PDLIM1O00151 RPL37P6-202ENST00000464216 403 ntBASIC3.65□□□□□ -1.83
PDLIM1O00151 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.65□□□□□ -1.83
PDLIM1O00151 RPL7P1-201ENST00000468161 747 ntBASIC3.65□□□□□ -1.83
PDLIM1O00151 RPL7P9-201ENST00000468715 747 ntBASIC3.65□□□□□ -1.83
PDLIM1O00151 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
PDLIM1O00151 RPS27P23-201ENST00000487608 251 ntBASIC3.65□□□□□ -1.83
PDLIM1O00151 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.65□□□□□ -1.83
PDLIM1O00151 RN7SKP21-201ENST00000516503 220 ntBASIC3.65□□□□□ -1.83
PDLIM1O00151 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC3.65□□□□□ -1.83
PDLIM1O00151 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.65□□□□□ -1.83
PDLIM1O00151 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.65□□□□□ -1.83
PDLIM1O00151 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.65□□□□□ -1.83
PDLIM1O00151 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.65□□□□□ -1.83
PDLIM1O00151 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.65□□□□□ -1.83
PDLIM1O00151 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.65□□□□□ -1.83
PDLIM1O00151 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.65□□□□□ -1.83
PDLIM1O00151 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC3.65□□□□□ -1.83
PDLIM1O00151 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.65□□□□□ -1.83
PDLIM1O00151 AC016877.3-201ENST00000606778 504 ntBASIC3.65□□□□□ -1.83
PDLIM1O00151 AL359535.1-201ENST00000612100 1087 ntBASIC3.65□□□□□ -1.83
PDLIM1O00151 VN1R74P-201ENST00000613259 503 ntBASIC3.65□□□□□ -1.83
PDLIM1O00151 AC068831.8-201ENST00000620171 435 ntBASIC3.65□□□□□ -1.83
PDLIM1O00151 PLCE1P1-201ENST00000622094 305 ntBASIC3.65□□□□□ -1.83
PDLIM1O00151 AC006065.5-201ENST00000623427 349 ntBASIC3.65□□□□□ -1.83
PDLIM1O00151 AC126544.2-201ENST00000625174 749 ntBASIC3.65□□□□□ -1.83
PDLIM1O00151 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.65□□□□□ -1.83
PDLIM1O00151 AC138649.5-201ENST00000637456 137 ntBASIC3.65□□□□□ -1.83
PDLIM1O00151 AC139713.2-210ENST00000641741 992 ntBASIC3.65□□□□□ -1.83
PDLIM1O00151 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
PDLIM1O00151 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.65□□□□□ -1.83
PDLIM1O00151 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.83
PDLIM1O00151 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
PDLIM1O00151 AL079305.1-201ENST00000623159 3008 ntBASIC3.65□□□□□ -1.83
PDLIM1O00151 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC3.64□□□□□ -1.83
PDLIM1O00151 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PDLIM1O00151 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
PDLIM1O00151 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
PDLIM1O00151 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
PDLIM1O00151 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PDLIM1O00151 RNU6-353P-201ENST00000364266 108 ntBASIC3.64□□□□□ -1.83
PDLIM1O00151 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
PDLIM1O00151 SKINT1L-201ENST00000401057 817 ntBASIC3.64□□□□□ -1.83
PDLIM1O00151 AC092638.1-201ENST00000411966 1275 ntBASIC3.64□□□□□ -1.83
PDLIM1O00151 RPL7AP73-201ENST00000413490 353 ntBASIC3.64□□□□□ -1.83
PDLIM1O00151 NDUFB4P5-201ENST00000415445 361 ntBASIC3.64□□□□□ -1.83
PDLIM1O00151 PAICSP7-201ENST00000419829 962 ntBASIC3.64□□□□□ -1.83
PDLIM1O00151 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.64□□□□□ -1.83
PDLIM1O00151 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.64□□□□□ -1.83
PDLIM1O00151 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.64□□□□□ -1.83
PDLIM1O00151 RPS27AP12-201ENST00000429552 465 ntBASIC3.64□□□□□ -1.83
PDLIM1O00151 PSMA2P3-201ENST00000429685 675 ntBASIC3.64□□□□□ -1.83
PDLIM1O00151 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.64□□□□□ -1.83
PDLIM1O00151 BX679664.1-201ENST00000434429 253 ntBASIC3.64□□□□□ -1.83
PDLIM1O00151 AC009969.1-201ENST00000438726 172 ntBASIC3.64□□□□□ -1.83
PDLIM1O00151 AC114755.5-201ENST00000447760 831 ntBASIC3.64□□□□□ -1.83
PDLIM1O00151 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.64□□□□□ -1.83
PDLIM1O00151 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.64□□□□□ -1.83
PDLIM1O00151 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.64□□□□□ -1.83
PDLIM1O00151 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC3.64□□□□□ -1.83
PDLIM1O00151 NAP1L1P3-201ENST00000462291 880 ntBASIC3.64□□□□□ -1.83
PDLIM1O00151 RPS7P7-201ENST00000463499 571 ntBASIC3.64□□□□□ -1.83
PDLIM1O00151 AC146507.1-201ENST00000468335 354 ntBASIC3.64□□□□□ -1.83
PDLIM1O00151 XACT-201ENST00000468762 497 ntTSL 5 BASIC3.64□□□□□ -1.83
PDLIM1O00151 RN7SL604P-201ENST00000492589 296 ntBASIC3.64□□□□□ -1.83
PDLIM1O00151 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PDLIM1O00151 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PDLIM1O00151 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PDLIM1O00151 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PDLIM1O00151 AC068657.1-201ENST00000520807 306 ntBASIC3.64□□□□□ -1.83
PDLIM1O00151 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.64□□□□□ -1.83
PDLIM1O00151 OR6C73P-201ENST00000546432 358 ntBASIC3.64□□□□□ -1.83
PDLIM1O00151 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.64□□□□□ -1.83
PDLIM1O00151 MTCO1P40-201ENST00000574371 625 ntBASIC3.64□□□□□ -1.83
PDLIM1O00151 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.64□□□□□ -1.83
PDLIM1O00151 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.64□□□□□ -1.83
PDLIM1O00151 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC3.64□□□□□ -1.83
PDLIM1O00151 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.64□□□□□ -1.83
PDLIM1O00151 RNU6-1192P-201ENST00000612197 107 ntBASIC3.64□□□□□ -1.83
PDLIM1O00151 RNU6-489P-201ENST00000618289 107 ntBASIC3.64□□□□□ -1.83
PDLIM1O00151 AC007275.1-201ENST00000621243 671 ntBASIC3.64□□□□□ -1.83
PDLIM1O00151 AC103798.2-201ENST00000624292 632 ntBASIC3.64□□□□□ -1.83
PDLIM1O00151 MIR4278-201ENST00000636094 69 ntBASIC3.64□□□□□ -1.83
PDLIM1O00151 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PDLIM1O00151 AC073073.2-201ENST00000609827 2578 ntBASIC3.64□□□□□ -1.83
PDLIM1O00151 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.64□□□□□ -1.83
PDLIM1O00151 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
PDLIM1O00151 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PDLIM1O00151 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
PDLIM1O00151 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.64□□□□□ -1.83
PDLIM1O00151 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
PDLIM1O00151 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
PDLIM1O00151 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PDLIM1O00151 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms