Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 AC025918.2-201ENST00000558683 763 ntBASIC2.8□□□□□ -1.96
RBFOX3A6NFN3 AC107954.1-201ENST00000565906 727 ntBASIC2.8□□□□□ -1.96
RBFOX3A6NFN3 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC2.8□□□□□ -1.96
RBFOX3A6NFN3 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC2.8□□□□□ -1.96
RBFOX3A6NFN3 AL020997.2-201ENST00000602607 184 ntBASIC2.8□□□□□ -1.96
RBFOX3A6NFN3 AL009028.1-201ENST00000604895 802 ntBASIC2.8□□□□□ -1.96
RBFOX3A6NFN3 AL590392.1-201ENST00000604960 446 ntBASIC2.8□□□□□ -1.96
RBFOX3A6NFN3 AC135178.6-201ENST00000605314 398 ntBASIC2.8□□□□□ -1.96
RBFOX3A6NFN3 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC2.8□□□□□ -1.96
RBFOX3A6NFN3 MIR8059-201ENST00000620427 81 ntBASIC2.8□□□□□ -1.96
RBFOX3A6NFN3 AP003400.6-201ENST00000624698 740 ntBASIC2.8□□□□□ -1.96
RBFOX3A6NFN3 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC2.8□□□□□ -1.96
RBFOX3A6NFN3 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC2.8□□□□□ -1.96
RBFOX3A6NFN3 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.8□□□□□ -1.96
RBFOX3A6NFN3 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
RBFOX3A6NFN3 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC2.8□□□□□ -1.96
RBFOX3A6NFN3 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC2.8□□□□□ -1.96
RBFOX3A6NFN3 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
RBFOX3A6NFN3 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC2.8□□□□□ -1.96
RBFOX3A6NFN3 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.8□□□□□ -1.96
RBFOX3A6NFN3 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.8□□□□□ -1.96
RBFOX3A6NFN3 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
RBFOX3A6NFN3 CD36-221ENST00000534394 1741 ntTSL 2 BASIC2.79□□□□□ -1.96
RBFOX3A6NFN3 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC2.79□□□□□ -1.96
RBFOX3A6NFN3 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
RBFOX3A6NFN3 AC118273.1-201ENST00000525324 3006 ntBASIC2.79□□□□□ -1.96
RBFOX3A6NFN3 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
RBFOX3A6NFN3 RPL7P26-201ENST00000333817 754 ntBASIC2.79□□□□□ -1.96
RBFOX3A6NFN3 RNU6-1339P-201ENST00000363574 91 ntBASIC2.79□□□□□ -1.96
RBFOX3A6NFN3 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC2.79□□□□□ -1.96
RBFOX3A6NFN3 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
RBFOX3A6NFN3 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC2.79□□□□□ -1.96
RBFOX3A6NFN3 SNORA48.8-201ENST00000391324 134 ntBASIC2.79□□□□□ -1.96
RBFOX3A6NFN3 RPL23AP47-201ENST00000408017 460 ntBASIC2.79□□□□□ -1.96
RBFOX3A6NFN3 RNU6-628P-201ENST00000410675 107 ntBASIC2.79□□□□□ -1.96
RBFOX3A6NFN3 AC073264.1-201ENST00000411508 416 ntBASIC2.79□□□□□ -1.96
RBFOX3A6NFN3 AC007899.1-201ENST00000412776 775 ntBASIC2.79□□□□□ -1.96
RBFOX3A6NFN3 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC2.79□□□□□ -1.96
RBFOX3A6NFN3 TATDN1P1-201ENST00000414123 891 ntBASIC2.79□□□□□ -1.96
RBFOX3A6NFN3 NDUFB4P5-201ENST00000415445 361 ntBASIC2.79□□□□□ -1.96
RBFOX3A6NFN3 RPS3AP9-201ENST00000417027 792 ntBASIC2.79□□□□□ -1.96
RBFOX3A6NFN3 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC2.79□□□□□ -1.96
RBFOX3A6NFN3 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC2.79□□□□□ -1.96
RBFOX3A6NFN3 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC2.79□□□□□ -1.96
RBFOX3A6NFN3 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC2.79□□□□□ -1.96
RBFOX3A6NFN3 RPL36P19-201ENST00000430744 301 ntBASIC2.79□□□□□ -1.96
RBFOX3A6NFN3 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC2.79□□□□□ -1.96
RBFOX3A6NFN3 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC2.79□□□□□ -1.96
RBFOX3A6NFN3 AC007000.2-201ENST00000442564 487 ntBASIC2.79□□□□□ -1.96
RBFOX3A6NFN3 RSL24D1P2-201ENST00000445584 366 ntBASIC2.79□□□□□ -1.96
RBFOX3A6NFN3 AL034418.1-201ENST00000448675 860 ntBASIC2.79□□□□□ -1.96
RBFOX3A6NFN3 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC2.79□□□□□ -1.96
RBFOX3A6NFN3 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC2.79□□□□□ -1.96
RBFOX3A6NFN3 MTND2P6-201ENST00000455337 1030 ntBASIC2.79□□□□□ -1.96
RBFOX3A6NFN3 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC2.79□□□□□ -1.96
RBFOX3A6NFN3 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC2.79□□□□□ -1.96
RBFOX3A6NFN3 AC091167.1-201ENST00000492017 396 ntBASIC2.79□□□□□ -1.96
RBFOX3A6NFN3 RPS27AP13-201ENST00000498403 237 ntBASIC2.79□□□□□ -1.96
RBFOX3A6NFN3 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC2.79□□□□□ -1.96
RBFOX3A6NFN3 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC2.79□□□□□ -1.96
RBFOX3A6NFN3 AC025674.1-201ENST00000507074 324 ntBASIC2.79□□□□□ -1.96
RBFOX3A6NFN3 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC2.79□□□□□ -1.96
RBFOX3A6NFN3 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC2.79□□□□□ -1.96
RBFOX3A6NFN3 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC2.79□□□□□ -1.96
RBFOX3A6NFN3 RNU6-751P-201ENST00000516382 101 ntBASIC2.79□□□□□ -1.96
RBFOX3A6NFN3 AC103833.1-201ENST00000517442 172 ntBASIC2.79□□□□□ -1.96
RBFOX3A6NFN3 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC2.79□□□□□ -1.96
RBFOX3A6NFN3 OR7E13P-201ENST00000526052 910 ntBASIC2.79□□□□□ -1.96
RBFOX3A6NFN3 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
RBFOX3A6NFN3 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC2.79□□□□□ -1.96
RBFOX3A6NFN3 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC2.79□□□□□ -1.96
RBFOX3A6NFN3 AC093014.1-201ENST00000548926 724 ntBASIC2.79□□□□□ -1.96
RBFOX3A6NFN3 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC2.79□□□□□ -1.96
RBFOX3A6NFN3 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC2.79□□□□□ -1.96
RBFOX3A6NFN3 AC233266.2-201ENST00000567067 528 ntBASIC2.79□□□□□ -1.96
RBFOX3A6NFN3 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC2.79□□□□□ -1.96
RBFOX3A6NFN3 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC2.79□□□□□ -1.96
RBFOX3A6NFN3 AP001033.2-201ENST00000609701 1003 ntBASIC2.79□□□□□ -1.96
RBFOX3A6NFN3 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC2.79□□□□□ -1.96
RBFOX3A6NFN3 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
RBFOX3A6NFN3 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
RBFOX3A6NFN3 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC2.79□□□□□ -1.96
RBFOX3A6NFN3 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC2.79□□□□□ -1.96
RBFOX3A6NFN3 AL109659.3-201ENST00000624985 950 ntBASIC2.79□□□□□ -1.96
RBFOX3A6NFN3 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC2.79□□□□□ -1.96
RBFOX3A6NFN3 AL356118.1-201ENST00000635272 1078 ntBASIC2.79□□□□□ -1.96
RBFOX3A6NFN3 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
RBFOX3A6NFN3 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
RBFOX3A6NFN3 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
RBFOX3A6NFN3 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC2.78□□□□□ -1.96
RBFOX3A6NFN3 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.78□□□□□ -1.96
RBFOX3A6NFN3 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC2.78□□□□□ -1.96
RBFOX3A6NFN3 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
RBFOX3A6NFN3 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
RBFOX3A6NFN3 MTND5P11-201ENST00000511037 1812 ntBASIC2.78□□□□□ -1.96
RBFOX3A6NFN3 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC2.78□□□□□ -1.96
RBFOX3A6NFN3 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC2.78□□□□□ -1.96
RBFOX3A6NFN3 RNU6-1151P-201ENST00000384684 107 ntBASIC2.78□□□□□ -1.96
RBFOX3A6NFN3 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
RBFOX3A6NFN3 RPL21P3-201ENST00000395517 478 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms