Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
TRAV27A0A087WT01 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
TRAV27A0A087WT01 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
TRAV27A0A087WT01 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.7□□□□□ -1.98
TRAV27A0A087WT01 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
TRAV27A0A087WT01 GTF2H2B-203ENST00000508065 1432 ntBASIC2.7□□□□□ -1.98
TRAV27A0A087WT01 AL353743.4-201ENST00000422653 1547 ntBASIC2.7□□□□□ -1.98
TRAV27A0A087WT01 MIR22-201ENST00000362190 85 ntBASIC2.7□□□□□ -1.98
TRAV27A0A087WT01 U3.19-201ENST00000390893 196 ntBASIC2.7□□□□□ -1.98
TRAV27A0A087WT01 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.7□□□□□ -1.98
TRAV27A0A087WT01 RN7SKP222-201ENST00000410651 315 ntBASIC2.7□□□□□ -1.98
TRAV27A0A087WT01 RN7SKP58-201ENST00000411010 305 ntBASIC2.7□□□□□ -1.98
TRAV27A0A087WT01 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC2.7□□□□□ -1.98
TRAV27A0A087WT01 AC092754.2-201ENST00000463506 460 ntBASIC2.7□□□□□ -1.98
TRAV27A0A087WT01 RPS17P11-201ENST00000474297 293 ntBASIC2.7□□□□□ -1.98
TRAV27A0A087WT01 RPS29P2-201ENST00000479278 136 ntBASIC2.7□□□□□ -1.98
TRAV27A0A087WT01 AP002812.1-201ENST00000495378 474 ntBASIC2.7□□□□□ -1.98
TRAV27A0A087WT01 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC2.7□□□□□ -1.98
TRAV27A0A087WT01 PRELID3BP6-201ENST00000503839 571 ntBASIC2.7□□□□□ -1.98
TRAV27A0A087WT01 AC147055.1-201ENST00000509261 750 ntBASIC2.7□□□□□ -1.98
TRAV27A0A087WT01 AC005921.1-201ENST00000510589 286 ntBASIC2.7□□□□□ -1.98
TRAV27A0A087WT01 AC010285.3-201ENST00000511668 676 ntBASIC2.7□□□□□ -1.98
TRAV27A0A087WT01 RN7SKP272-201ENST00000516988 232 ntBASIC2.7□□□□□ -1.98
TRAV27A0A087WT01 AP000619.3-201ENST00000535634 1127 ntBASIC2.7□□□□□ -1.98
TRAV27A0A087WT01 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC2.7□□□□□ -1.98
TRAV27A0A087WT01 CSNK1A1P1-202ENST00000563423 981 ntBASIC2.7□□□□□ -1.98
TRAV27A0A087WT01 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.7□□□□□ -1.98
TRAV27A0A087WT01 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
TRAV27A0A087WT01 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC2.7□□□□□ -1.98
TRAV27A0A087WT01 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC2.7□□□□□ -1.98
TRAV27A0A087WT01 AC083760.1-201ENST00000589621 670 ntBASIC2.7□□□□□ -1.98
TRAV27A0A087WT01 AC011468.4-201ENST00000603942 409 ntBASIC2.7□□□□□ -1.98
TRAV27A0A087WT01 AC012557.1-201ENST00000607115 611 ntBASIC2.7□□□□□ -1.98
TRAV27A0A087WT01 AC239803.2-201ENST00000610161 430 ntBASIC2.7□□□□□ -1.98
TRAV27A0A087WT01 AC012314.7-201ENST00000619693 93 ntBASIC2.7□□□□□ -1.98
TRAV27A0A087WT01 AC108206.1-201ENST00000570186 4159 ntBASIC2.7□□□□□ -1.98
TRAV27A0A087WT01 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
TRAV27A0A087WT01 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
TRAV27A0A087WT01 AL672296.1-201ENST00000427780 2158 ntBASIC2.69□□□□□ -1.98
TRAV27A0A087WT01 SNORA31-201ENST00000362607 130 ntBASIC2.69□□□□□ -1.98
TRAV27A0A087WT01 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
TRAV27A0A087WT01 SNORA48.8-201ENST00000391324 134 ntBASIC2.69□□□□□ -1.98
TRAV27A0A087WT01 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC2.69□□□□□ -1.98
TRAV27A0A087WT01 RPL23AP69-201ENST00000431134 458 ntBASIC2.69□□□□□ -1.98
TRAV27A0A087WT01 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC2.69□□□□□ -1.98
TRAV27A0A087WT01 AC239367.2-201ENST00000447309 705 ntBASIC2.69□□□□□ -1.98
TRAV27A0A087WT01 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC2.69□□□□□ -1.98
TRAV27A0A087WT01 PRSS3P4-201ENST00000453323 162 ntBASIC2.69□□□□□ -1.98
TRAV27A0A087WT01 RN7SL601P-201ENST00000471221 293 ntBASIC2.69□□□□□ -1.98
TRAV27A0A087WT01 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC2.69□□□□□ -1.98
TRAV27A0A087WT01 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC2.69□□□□□ -1.98
TRAV27A0A087WT01 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
TRAV27A0A087WT01 RPL12P22-201ENST00000519073 490 ntBASIC2.69□□□□□ -1.98
TRAV27A0A087WT01 EIF4A2P3-201ENST00000525903 1055 ntBASIC2.69□□□□□ -1.98
TRAV27A0A087WT01 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
TRAV27A0A087WT01 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.69□□□□□ -1.98
TRAV27A0A087WT01 TRAV37-201ENST00000553906 342 ntBASIC2.69□□□□□ -1.98
TRAV27A0A087WT01 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC2.69□□□□□ -1.98
TRAV27A0A087WT01 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC2.69□□□□□ -1.98
TRAV27A0A087WT01 AL031985.2-201ENST00000600955 480 ntBASIC2.69□□□□□ -1.98
TRAV27A0A087WT01 LLPHP1-201ENST00000603571 367 ntBASIC2.69□□□□□ -1.98
TRAV27A0A087WT01 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC2.69□□□□□ -1.98
TRAV27A0A087WT01 AC005156.1-201ENST00000613371 573 ntBASIC2.69□□□□□ -1.98
TRAV27A0A087WT01 AL162574.2-201ENST00000614618 657 ntBASIC2.69□□□□□ -1.98
TRAV27A0A087WT01 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC2.69□□□□□ -1.98
TRAV27A0A087WT01 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
TRAV27A0A087WT01 AC139713.2-210ENST00000641741 992 ntBASIC2.69□□□□□ -1.98
TRAV27A0A087WT01 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
TRAV27A0A087WT01 AC118273.1-201ENST00000525324 3006 ntBASIC2.69□□□□□ -1.98
TRAV27A0A087WT01 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
TRAV27A0A087WT01 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
TRAV27A0A087WT01 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
TRAV27A0A087WT01 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
TRAV27A0A087WT01 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
TRAV27A0A087WT01 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC2.68□□□□□ -1.98
TRAV27A0A087WT01 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC2.68□□□□□ -1.98
TRAV27A0A087WT01 RNA5SP267-201ENST00000364893 126 ntBASIC2.68□□□□□ -1.98
TRAV27A0A087WT01 SNORA51.4-201ENST00000364993 124 ntBASIC2.68□□□□□ -1.98
TRAV27A0A087WT01 SNORA54-201ENST00000384281 123 ntBASIC2.68□□□□□ -1.98
TRAV27A0A087WT01 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
TRAV27A0A087WT01 AP000567.1-201ENST00000406413 156 ntBASIC2.68□□□□□ -1.98
TRAV27A0A087WT01 U3.42-201ENST00000408746 214 ntBASIC2.68□□□□□ -1.98
TRAV27A0A087WT01 RNA5SP120-201ENST00000410900 112 ntBASIC2.68□□□□□ -1.98
TRAV27A0A087WT01 RPS3AP25-201ENST00000411660 793 ntBASIC2.68□□□□□ -1.98
TRAV27A0A087WT01 RPL7P8-201ENST00000411964 730 ntBASIC2.68□□□□□ -1.98
TRAV27A0A087WT01 BMS1P22-201ENST00000414726 313 ntBASIC2.68□□□□□ -1.98
TRAV27A0A087WT01 AL050321.1-201ENST00000432363 400 ntBASIC2.68□□□□□ -1.98
TRAV27A0A087WT01 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC2.68□□□□□ -1.98
TRAV27A0A087WT01 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC2.68□□□□□ -1.98
TRAV27A0A087WT01 SLC31A1P1-201ENST00000451221 567 ntBASIC2.68□□□□□ -1.98
TRAV27A0A087WT01 CALM1P2-201ENST00000452941 448 ntBASIC2.68□□□□□ -1.98
TRAV27A0A087WT01 AC117440.1-201ENST00000474107 571 ntBASIC2.68□□□□□ -1.98
TRAV27A0A087WT01 RPL21P103-201ENST00000479921 488 ntBASIC2.68□□□□□ -1.98
TRAV27A0A087WT01 RN7SL504P-201ENST00000494496 287 ntBASIC2.68□□□□□ -1.98
TRAV27A0A087WT01 AC078918.1-201ENST00000498515 228 ntBASIC2.68□□□□□ -1.98
TRAV27A0A087WT01 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC2.68□□□□□ -1.98
TRAV27A0A087WT01 AC010265.1-201ENST00000513509 211 ntBASIC2.68□□□□□ -1.98
TRAV27A0A087WT01 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
TRAV27A0A087WT01 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC2.68□□□□□ -1.98
TRAV27A0A087WT01 AC010198.2-201ENST00000550612 259 ntBASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 124.3 ms