Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 GDI2P1-201ENST00000429312 1336 ntBASIC4.87□□□□□ -1.63
PCDHB1Q9Y5F3 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PCDHB1Q9Y5F3 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PCDHB1Q9Y5F3 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.87□□□□□ -1.63
PCDHB1Q9Y5F3 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
PCDHB1Q9Y5F3 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.87□□□□□ -1.63
PCDHB1Q9Y5F3 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.87□□□□□ -1.63
PCDHB1Q9Y5F3 AC027514.1-201ENST00000588561 1603 ntBASIC4.86□□□□□ -1.63
PCDHB1Q9Y5F3 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
PCDHB1Q9Y5F3 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.86□□□□□ -1.63
PCDHB1Q9Y5F3 AC130650.2-201ENST00000618736 2403 ntBASIC4.86□□□□□ -1.63
PCDHB1Q9Y5F3 AC107068.1-201ENST00000563286 4218 ntBASIC4.86□□□□□ -1.63
PCDHB1Q9Y5F3 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
PCDHB1Q9Y5F3 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PCDHB1Q9Y5F3 RNU4-44P-201ENST00000363050 141 ntBASIC4.86□□□□□ -1.63
PCDHB1Q9Y5F3 AC016769.3-201ENST00000396562 315 ntBASIC4.86□□□□□ -1.63
PCDHB1Q9Y5F3 RPS3AP23-201ENST00000401762 784 ntBASIC4.86□□□□□ -1.63
PCDHB1Q9Y5F3 UBE2V1P10-201ENST00000414685 269 ntBASIC4.86□□□□□ -1.63
PCDHB1Q9Y5F3 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.86□□□□□ -1.63
PCDHB1Q9Y5F3 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.86□□□□□ -1.63
PCDHB1Q9Y5F3 B3GALNT1P1-201ENST00000420569 975 ntBASIC4.86□□□□□ -1.63
PCDHB1Q9Y5F3 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.86□□□□□ -1.63
PCDHB1Q9Y5F3 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC4.86□□□□□ -1.63
PCDHB1Q9Y5F3 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.86□□□□□ -1.63
PCDHB1Q9Y5F3 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC4.86□□□□□ -1.63
PCDHB1Q9Y5F3 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.86□□□□□ -1.63
PCDHB1Q9Y5F3 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC4.86□□□□□ -1.63
PCDHB1Q9Y5F3 LSM1P1-201ENST00000438629 273 ntBASIC4.86□□□□□ -1.63
PCDHB1Q9Y5F3 MTND5P14-201ENST00000441481 1267 ntBASIC4.86□□□□□ -1.63
PCDHB1Q9Y5F3 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4.86□□□□□ -1.63
PCDHB1Q9Y5F3 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.86□□□□□ -1.63
PCDHB1Q9Y5F3 SNORD42A-201ENST00000459584 64 ntBASIC4.86□□□□□ -1.63
PCDHB1Q9Y5F3 AC011825.1-201ENST00000484967 388 ntBASIC4.86□□□□□ -1.63
PCDHB1Q9Y5F3 AC108941.1-201ENST00000502853 530 ntBASIC4.86□□□□□ -1.63
PCDHB1Q9Y5F3 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.86□□□□□ -1.63
PCDHB1Q9Y5F3 GAPDHP56-201ENST00000506031 988 ntBASIC4.86□□□□□ -1.63
PCDHB1Q9Y5F3 HMGB3P16-201ENST00000508037 287 ntBASIC4.86□□□□□ -1.63
PCDHB1Q9Y5F3 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.86□□□□□ -1.63
PCDHB1Q9Y5F3 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.86□□□□□ -1.63
PCDHB1Q9Y5F3 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.86□□□□□ -1.63
PCDHB1Q9Y5F3 AL139174.1-201ENST00000531489 886 ntBASIC4.86□□□□□ -1.63
PCDHB1Q9Y5F3 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.86□□□□□ -1.63
PCDHB1Q9Y5F3 AC068993.1-201ENST00000546724 589 ntBASIC4.86□□□□□ -1.63
PCDHB1Q9Y5F3 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
PCDHB1Q9Y5F3 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.86□□□□□ -1.63
PCDHB1Q9Y5F3 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC4.86□□□□□ -1.63
PCDHB1Q9Y5F3 LARP7P2-201ENST00000575306 125 ntBASIC4.86□□□□□ -1.63
PCDHB1Q9Y5F3 MTND1P15-201ENST00000579262 949 ntBASIC4.86□□□□□ -1.63
PCDHB1Q9Y5F3 AP001180.3-201ENST00000582221 145 ntBASIC4.86□□□□□ -1.63
PCDHB1Q9Y5F3 MIR548AB-201ENST00000584917 84 ntBASIC4.86□□□□□ -1.63
PCDHB1Q9Y5F3 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC4.86□□□□□ -1.63
PCDHB1Q9Y5F3 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.86□□□□□ -1.63
PCDHB1Q9Y5F3 RPL26P30-202ENST00000602923 645 ntBASIC4.86□□□□□ -1.63
PCDHB1Q9Y5F3 RPL23AP92-201ENST00000603609 255 ntBASIC4.86□□□□□ -1.63
PCDHB1Q9Y5F3 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
PCDHB1Q9Y5F3 AC108479.2-201ENST00000617314 601 ntBASIC4.86□□□□□ -1.63
PCDHB1Q9Y5F3 AL357080.1-201ENST00000617394 239 ntBASIC4.86□□□□□ -1.63
PCDHB1Q9Y5F3 AL139089.1-201ENST00000620372 975 ntBASIC4.86□□□□□ -1.63
PCDHB1Q9Y5F3 OR11H5P-202ENST00000641612 1325 ntBASIC4.86□□□□□ -1.63
PCDHB1Q9Y5F3 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.86□□□□□ -1.63
PCDHB1Q9Y5F3 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PCDHB1Q9Y5F3 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
PCDHB1Q9Y5F3 AC009643.2-201ENST00000603543 1448 ntBASIC4.86□□□□□ -1.63
PCDHB1Q9Y5F3 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.86□□□□□ -1.63
PCDHB1Q9Y5F3 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
PCDHB1Q9Y5F3 SAMMSON-226ENST00000642089 1582 ntBASIC4.86□□□□□ -1.63
PCDHB1Q9Y5F3 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PCDHB1Q9Y5F3 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
PCDHB1Q9Y5F3 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.86□□□□□ -1.63
PCDHB1Q9Y5F3 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
PCDHB1Q9Y5F3 AC008758.3-201ENST00000507003 1829 ntBASIC4.86□□□□□ -1.63
PCDHB1Q9Y5F3 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC4.86□□□□□ -1.63
PCDHB1Q9Y5F3 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PCDHB1Q9Y5F3 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
PCDHB1Q9Y5F3 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.85□□□□□ -1.63
PCDHB1Q9Y5F3 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.85□□□□□ -1.63
PCDHB1Q9Y5F3 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
PCDHB1Q9Y5F3 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PCDHB1Q9Y5F3 Y_RNA.6-201ENST00000362350 114 ntBASIC4.85□□□□□ -1.63
PCDHB1Q9Y5F3 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
PCDHB1Q9Y5F3 U8.14-201ENST00000390843 143 ntBASIC4.85□□□□□ -1.63
PCDHB1Q9Y5F3 RNU6-952P-201ENST00000391164 108 ntBASIC4.85□□□□□ -1.63
PCDHB1Q9Y5F3 TANK-206ENST00000406287 875 ntTSL 5 BASIC4.85□□□□□ -1.63
PCDHB1Q9Y5F3 RNU2-21P-201ENST00000410368 188 ntBASIC4.85□□□□□ -1.63
PCDHB1Q9Y5F3 Y_RNA.598-201ENST00000410480 95 ntBASIC4.85□□□□□ -1.63
PCDHB1Q9Y5F3 AC022028.1-201ENST00000412054 408 ntBASIC4.85□□□□□ -1.63
PCDHB1Q9Y5F3 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC4.85□□□□□ -1.63
PCDHB1Q9Y5F3 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.85□□□□□ -1.63
PCDHB1Q9Y5F3 Z97055.1-201ENST00000419730 712 ntBASIC4.85□□□□□ -1.63
PCDHB1Q9Y5F3 OFD1P18Y-201ENST00000420889 959 ntBASIC4.85□□□□□ -1.63
PCDHB1Q9Y5F3 RPL18P10-201ENST00000425606 538 ntBASIC4.85□□□□□ -1.63
PCDHB1Q9Y5F3 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PCDHB1Q9Y5F3 OFD1P13Y-201ENST00000431179 1232 ntBASIC4.85□□□□□ -1.63
PCDHB1Q9Y5F3 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.85□□□□□ -1.63
PCDHB1Q9Y5F3 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PCDHB1Q9Y5F3 SKP1P1-201ENST00000438081 489 ntBASIC4.85□□□□□ -1.63
PCDHB1Q9Y5F3 AL357520.1-201ENST00000441557 453 ntBASIC4.85□□□□□ -1.63
PCDHB1Q9Y5F3 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC4.85□□□□□ -1.63
PCDHB1Q9Y5F3 AC000111.2-201ENST00000448200 210 ntBASIC4.85□□□□□ -1.63
PCDHB1Q9Y5F3 RPL7P31-201ENST00000450192 724 ntBASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms