Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 PDSS1P1-201ENST00000422953 1114 ntBASIC4.38□□□□□ -1.71
PKP3Q9Y446 EIF1P3-201ENST00000423841 334 ntBASIC4.38□□□□□ -1.71
PKP3Q9Y446 AC073335.1-201ENST00000427776 363 ntBASIC4.38□□□□□ -1.71
PKP3Q9Y446 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.38□□□□□ -1.71
PKP3Q9Y446 CEACAMP1-201ENST00000434624 1035 ntBASIC4.38□□□□□ -1.71
PKP3Q9Y446 AC092427.1-201ENST00000439177 601 ntBASIC4.38□□□□□ -1.71
PKP3Q9Y446 GEMIN8P3-201ENST00000445417 720 ntBASIC4.38□□□□□ -1.71
PKP3Q9Y446 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC4.38□□□□□ -1.71
PKP3Q9Y446 AC092757.1-201ENST00000467293 467 ntBASIC4.38□□□□□ -1.71
PKP3Q9Y446 MTND4LP3-201ENST00000468320 276 ntBASIC4.38□□□□□ -1.71
PKP3Q9Y446 DSTNP2-201ENST00000504533 515 ntBASIC4.38□□□□□ -1.71
PKP3Q9Y446 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PKP3Q9Y446 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.38□□□□□ -1.71
PKP3Q9Y446 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.38□□□□□ -1.71
PKP3Q9Y446 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.38□□□□□ -1.71
PKP3Q9Y446 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC4.38□□□□□ -1.71
PKP3Q9Y446 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC4.38□□□□□ -1.71
PKP3Q9Y446 AL352979.3-201ENST00000553515 247 ntBASIC4.38□□□□□ -1.71
PKP3Q9Y446 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC4.38□□□□□ -1.71
PKP3Q9Y446 ACTR3BP3-201ENST00000565577 979 ntBASIC4.38□□□□□ -1.71
PKP3Q9Y446 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PKP3Q9Y446 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC4.38□□□□□ -1.71
PKP3Q9Y446 RPL23AP97-201ENST00000568955 471 ntBASIC4.38□□□□□ -1.71
PKP3Q9Y446 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.38□□□□□ -1.71
PKP3Q9Y446 MIR4504-201ENST00000577413 92 ntBASIC4.38□□□□□ -1.71
PKP3Q9Y446 MIR4716-201ENST00000579628 84 ntBASIC4.38□□□□□ -1.71
PKP3Q9Y446 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC4.38□□□□□ -1.71
PKP3Q9Y446 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PKP3Q9Y446 AC083899.3-201ENST00000603413 594 ntBASIC4.38□□□□□ -1.71
PKP3Q9Y446 AC073114.1-201ENST00000612027 490 ntBASIC4.38□□□□□ -1.71
PKP3Q9Y446 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
PKP3Q9Y446 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
PKP3Q9Y446 uc_338.13-201ENST00000618243 179 ntBASIC4.38□□□□□ -1.71
PKP3Q9Y446 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.38□□□□□ -1.71
PKP3Q9Y446 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC4.38□□□□□ -1.71
PKP3Q9Y446 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC4.38□□□□□ -1.71
PKP3Q9Y446 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.38□□□□□ -1.71
PKP3Q9Y446 AC099063.3-201ENST00000642066 185 ntBASIC4.38□□□□□ -1.71
PKP3Q9Y446 MTCO1P14-201ENST00000441695 1559 ntBASIC4.38□□□□□ -1.71
PKP3Q9Y446 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.38□□□□□ -1.71
PKP3Q9Y446 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PKP3Q9Y446 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
PKP3Q9Y446 MTND5P24-201ENST00000438892 1767 ntBASIC4.37□□□□□ -1.71
PKP3Q9Y446 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
PKP3Q9Y446 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PKP3Q9Y446 Z95327.2-201ENST00000414579 1873 ntBASIC4.37□□□□□ -1.71
PKP3Q9Y446 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
PKP3Q9Y446 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PKP3Q9Y446 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
PKP3Q9Y446 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
PKP3Q9Y446 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
PKP3Q9Y446 Y_RNA.201-201ENST00000364052 96 ntBASIC4.37□□□□□ -1.71
PKP3Q9Y446 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
PKP3Q9Y446 SNRPEP2-201ENST00000397592 279 ntBASIC4.37□□□□□ -1.71
PKP3Q9Y446 RPS3AP26-201ENST00000398259 784 ntBASIC4.37□□□□□ -1.71
PKP3Q9Y446 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.37□□□□□ -1.71
PKP3Q9Y446 MIR1911-201ENST00000410783 80 ntBASIC4.37□□□□□ -1.71
PKP3Q9Y446 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.37□□□□□ -1.71
PKP3Q9Y446 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.37□□□□□ -1.71
PKP3Q9Y446 RPS27AP7-201ENST00000422792 455 ntBASIC4.37□□□□□ -1.71
PKP3Q9Y446 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC4.37□□□□□ -1.71
PKP3Q9Y446 AC096632.1-201ENST00000427395 310 ntBASIC4.37□□□□□ -1.71
PKP3Q9Y446 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC4.37□□□□□ -1.71
PKP3Q9Y446 THAP5P1-201ENST00000439089 262 ntBASIC4.37□□□□□ -1.71
PKP3Q9Y446 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC4.37□□□□□ -1.71
PKP3Q9Y446 AC073587.1-201ENST00000447093 876 ntBASIC4.37□□□□□ -1.71
PKP3Q9Y446 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.37□□□□□ -1.71
PKP3Q9Y446 OR6C5P-201ENST00000452388 923 ntBASIC4.37□□□□□ -1.71
PKP3Q9Y446 USP9YP10-201ENST00000454868 628 ntBASIC4.37□□□□□ -1.71
PKP3Q9Y446 MTCO3P2-201ENST00000457365 171 ntBASIC4.37□□□□□ -1.71
PKP3Q9Y446 RPL23AP24-201ENST00000458203 385 ntBASIC4.37□□□□□ -1.71
PKP3Q9Y446 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.37□□□□□ -1.71
PKP3Q9Y446 RPL7AP28-201ENST00000464513 571 ntBASIC4.37□□□□□ -1.71
PKP3Q9Y446 RPL35AP15-201ENST00000468042 339 ntBASIC4.37□□□□□ -1.71
PKP3Q9Y446 AC087879.1-201ENST00000474343 374 ntBASIC4.37□□□□□ -1.71
PKP3Q9Y446 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC4.37□□□□□ -1.71
PKP3Q9Y446 AC013356.1-201ENST00000489027 564 ntBASIC4.37□□□□□ -1.71
PKP3Q9Y446 AC080014.1-201ENST00000496877 1201 ntBASIC4.37□□□□□ -1.71
PKP3Q9Y446 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC4.37□□□□□ -1.71
PKP3Q9Y446 OR2A20P-203ENST00000498397 1268 ntBASIC4.37□□□□□ -1.71
PKP3Q9Y446 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PKP3Q9Y446 SNX5P1-201ENST00000505757 1041 ntBASIC4.37□□□□□ -1.71
PKP3Q9Y446 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.37□□□□□ -1.71
PKP3Q9Y446 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC4.37□□□□□ -1.71
PKP3Q9Y446 USP9YP5-201ENST00000511770 630 ntBASIC4.37□□□□□ -1.71
PKP3Q9Y446 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.37□□□□□ -1.71
PKP3Q9Y446 AC239860.2-201ENST00000525886 270 ntBASIC4.37□□□□□ -1.71
PKP3Q9Y446 OR5BC1P-201ENST00000529327 739 ntBASIC4.37□□□□□ -1.71
PKP3Q9Y446 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
PKP3Q9Y446 PDCD5P1-201ENST00000543528 309 ntBASIC4.37□□□□□ -1.71
PKP3Q9Y446 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.37□□□□□ -1.71
PKP3Q9Y446 AL389895.1-201ENST00000554127 252 ntBASIC4.37□□□□□ -1.71
PKP3Q9Y446 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.37□□□□□ -1.71
PKP3Q9Y446 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.37□□□□□ -1.71
PKP3Q9Y446 HMGB3P26-201ENST00000560051 582 ntBASIC4.37□□□□□ -1.71
PKP3Q9Y446 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC4.37□□□□□ -1.71
PKP3Q9Y446 AGGF1P8-201ENST00000562979 1000 ntBASIC4.37□□□□□ -1.71
PKP3Q9Y446 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.37□□□□□ -1.71
PKP3Q9Y446 AC011477.5-201ENST00000586571 259 ntBASIC4.37□□□□□ -1.71
PKP3Q9Y446 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms