Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 FAM25E-202ENST00000608562 189 ntBASIC3.16□□□□□ -1.9
KCNIP3Q9Y2W7 SDR42E1P1-201ENST00000611327 477 ntBASIC3.16□□□□□ -1.9
KCNIP3Q9Y2W7 AC048347.1-201ENST00000624621 427 ntBASIC3.16□□□□□ -1.9
KCNIP3Q9Y2W7 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
KCNIP3Q9Y2W7 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.16□□□□□ -1.9
KCNIP3Q9Y2W7 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
KCNIP3Q9Y2W7 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
KCNIP3Q9Y2W7 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
KCNIP3Q9Y2W7 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
KCNIP3Q9Y2W7 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
KCNIP3Q9Y2W7 AL079305.1-201ENST00000623159 3008 ntBASIC3.15□□□□□ -1.9
KCNIP3Q9Y2W7 AL592494.2-201ENST00000425455 1548 ntBASIC3.15□□□□□ -1.9
KCNIP3Q9Y2W7 SNORA63.3-201ENST00000362682 132 ntBASIC3.15□□□□□ -1.91
KCNIP3Q9Y2W7 RNA5SP366-201ENST00000365454 123 ntBASIC3.15□□□□□ -1.91
KCNIP3Q9Y2W7 MIR199A2-201ENST00000385289 110 ntBASIC3.15□□□□□ -1.91
KCNIP3Q9Y2W7 MT-TC-201ENST00000387405 66 ntBASIC3.15□□□□□ -1.91
KCNIP3Q9Y2W7 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.15□□□□□ -1.91
KCNIP3Q9Y2W7 AL161909.1-201ENST00000397390 712 ntBASIC3.15□□□□□ -1.91
KCNIP3Q9Y2W7 AL121972.1-201ENST00000402023 252 ntBASIC3.15□□□□□ -1.91
KCNIP3Q9Y2W7 GSTA8P-201ENST00000404253 637 ntBASIC3.15□□□□□ -1.91
KCNIP3Q9Y2W7 AL138880.1-201ENST00000405824 642 ntBASIC3.15□□□□□ -1.91
KCNIP3Q9Y2W7 TCEA1P2-201ENST00000420496 906 ntBASIC3.15□□□□□ -1.91
KCNIP3Q9Y2W7 TRIAP1P1-201ENST00000427062 225 ntBASIC3.15□□□□□ -1.91
KCNIP3Q9Y2W7 MOB1AP1-201ENST00000430903 535 ntBASIC3.15□□□□□ -1.91
KCNIP3Q9Y2W7 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC3.15□□□□□ -1.91
KCNIP3Q9Y2W7 RPS7P2-201ENST00000435134 607 ntBASIC3.15□□□□□ -1.91
KCNIP3Q9Y2W7 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.15□□□□□ -1.91
KCNIP3Q9Y2W7 AL592437.1-201ENST00000443781 492 ntBASIC3.15□□□□□ -1.91
KCNIP3Q9Y2W7 RN7SL303P-201ENST00000469773 251 ntBASIC3.15□□□□□ -1.91
KCNIP3Q9Y2W7 AC105233.1-201ENST00000498840 781 ntBASIC3.15□□□□□ -1.91
KCNIP3Q9Y2W7 AC111000.3-201ENST00000508057 576 ntBASIC3.15□□□□□ -1.91
KCNIP3Q9Y2W7 TXNP6-201ENST00000510190 310 ntBASIC3.15□□□□□ -1.91
KCNIP3Q9Y2W7 RNA5SP135-201ENST00000517019 125 ntBASIC3.15□□□□□ -1.91
KCNIP3Q9Y2W7 AC008489.1-201ENST00000524271 483 ntBASIC3.15□□□□□ -1.91
KCNIP3Q9Y2W7 AP004371.1-201ENST00000525240 214 ntBASIC3.15□□□□□ -1.91
KCNIP3Q9Y2W7 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC3.15□□□□□ -1.91
KCNIP3Q9Y2W7 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC3.15□□□□□ -1.91
KCNIP3Q9Y2W7 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.15□□□□□ -1.91
KCNIP3Q9Y2W7 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC3.15□□□□□ -1.91
KCNIP3Q9Y2W7 AC006960.3-201ENST00000561845 705 ntBASIC3.15□□□□□ -1.91
KCNIP3Q9Y2W7 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.15□□□□□ -1.91
KCNIP3Q9Y2W7 MIR4666A-201ENST00000580160 79 ntBASIC3.15□□□□□ -1.91
KCNIP3Q9Y2W7 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.15□□□□□ -1.91
KCNIP3Q9Y2W7 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.15□□□□□ -1.91
KCNIP3Q9Y2W7 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.15□□□□□ -1.91
KCNIP3Q9Y2W7 SNORA51-201ENST00000606420 132 ntBASIC3.15□□□□□ -1.91
KCNIP3Q9Y2W7 AC107294.3-201ENST00000609211 526 ntBASIC3.15□□□□□ -1.91
KCNIP3Q9Y2W7 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
KCNIP3Q9Y2W7 AL672296.1-201ENST00000427780 2158 ntBASIC3.15□□□□□ -1.91
KCNIP3Q9Y2W7 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
KCNIP3Q9Y2W7 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.15□□□□□ -1.91
KCNIP3Q9Y2W7 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.14□□□□□ -1.91
KCNIP3Q9Y2W7 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
KCNIP3Q9Y2W7 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
KCNIP3Q9Y2W7 OR4A15-201ENST00000314706 1035 ntBASIC3.14□□□□□ -1.91
KCNIP3Q9Y2W7 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
KCNIP3Q9Y2W7 MIR383-201ENST00000362257 73 ntBASIC3.14□□□□□ -1.91
KCNIP3Q9Y2W7 RNU5B-1-201ENST00000363286 116 ntBASIC3.14□□□□□ -1.91
KCNIP3Q9Y2W7 RNU6-115P-201ENST00000364310 107 ntBASIC3.14□□□□□ -1.91
KCNIP3Q9Y2W7 RNA5SP97-201ENST00000365006 84 ntBASIC3.14□□□□□ -1.91
KCNIP3Q9Y2W7 Y_RNA.493-201ENST00000384422 102 ntBASIC3.14□□□□□ -1.91
KCNIP3Q9Y2W7 MIR105-2-201ENST00000385083 81 ntBASIC3.14□□□□□ -1.91
KCNIP3Q9Y2W7 RNU6-837P-201ENST00000391056 108 ntBASIC3.14□□□□□ -1.91
KCNIP3Q9Y2W7 RNU11-4P-201ENST00000391149 133 ntBASIC3.14□□□□□ -1.91
KCNIP3Q9Y2W7 TMSB4XP8-201ENST00000402089 135 ntBASIC3.14□□□□□ -1.91
KCNIP3Q9Y2W7 AL355615.1-201ENST00000406187 641 ntBASIC3.14□□□□□ -1.91
KCNIP3Q9Y2W7 AL583834.1-201ENST00000406943 343 ntBASIC3.14□□□□□ -1.91
KCNIP3Q9Y2W7 RNU6-575P-201ENST00000411326 105 ntBASIC3.14□□□□□ -1.91
KCNIP3Q9Y2W7 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC3.14□□□□□ -1.91
KCNIP3Q9Y2W7 AC092638.1-201ENST00000411966 1275 ntBASIC3.14□□□□□ -1.91
KCNIP3Q9Y2W7 TMSB4XP6-201ENST00000415187 135 ntBASIC3.14□□□□□ -1.91
KCNIP3Q9Y2W7 AL590139.1-201ENST00000416267 400 ntBASIC3.14□□□□□ -1.91
KCNIP3Q9Y2W7 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC3.14□□□□□ -1.91
KCNIP3Q9Y2W7 AC027644.1-201ENST00000419595 298 ntBASIC3.14□□□□□ -1.91
KCNIP3Q9Y2W7 RPL23AP38-201ENST00000423801 469 ntBASIC3.14□□□□□ -1.91
KCNIP3Q9Y2W7 TMSB4XP1-201ENST00000424567 135 ntBASIC3.14□□□□□ -1.91
KCNIP3Q9Y2W7 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.14□□□□□ -1.91
KCNIP3Q9Y2W7 AC006466.1-201ENST00000438721 289 ntBASIC3.14□□□□□ -1.91
KCNIP3Q9Y2W7 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.14□□□□□ -1.91
KCNIP3Q9Y2W7 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC3.14□□□□□ -1.91
KCNIP3Q9Y2W7 AC239367.2-201ENST00000447309 705 ntBASIC3.14□□□□□ -1.91
KCNIP3Q9Y2W7 AC004022.1-201ENST00000447766 1066 ntBASIC3.14□□□□□ -1.91
KCNIP3Q9Y2W7 RPS11P1-201ENST00000451072 473 ntBASIC3.14□□□□□ -1.91
KCNIP3Q9Y2W7 AC099563.1-201ENST00000456086 418 ntBASIC3.14□□□□□ -1.91
KCNIP3Q9Y2W7 RPS27P29-201ENST00000463110 252 ntBASIC3.14□□□□□ -1.91
KCNIP3Q9Y2W7 AC092754.2-201ENST00000463506 460 ntBASIC3.14□□□□□ -1.91
KCNIP3Q9Y2W7 RPL5P24-201ENST00000463742 885 ntBASIC3.14□□□□□ -1.91
KCNIP3Q9Y2W7 AL132838.2-201ENST00000492041 314 ntBASIC3.14□□□□□ -1.91
KCNIP3Q9Y2W7 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
KCNIP3Q9Y2W7 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3.14□□□□□ -1.91
KCNIP3Q9Y2W7 AC098799.1-201ENST00000504752 800 ntBASIC3.14□□□□□ -1.91
KCNIP3Q9Y2W7 HMGB1P22-201ENST00000505315 124 ntBASIC3.14□□□□□ -1.91
KCNIP3Q9Y2W7 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.14□□□□□ -1.91
KCNIP3Q9Y2W7 AC109471.1-201ENST00000511631 612 ntBASIC3.14□□□□□ -1.91
KCNIP3Q9Y2W7 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC3.14□□□□□ -1.91
KCNIP3Q9Y2W7 RN7SKP244-201ENST00000516513 307 ntBASIC3.14□□□□□ -1.91
KCNIP3Q9Y2W7 RPL12P22-201ENST00000519073 490 ntBASIC3.14□□□□□ -1.91
KCNIP3Q9Y2W7 AC087369.1-201ENST00000520775 996 ntBASIC3.14□□□□□ -1.91
KCNIP3Q9Y2W7 AC138701.1-201ENST00000524329 714 ntBASIC3.14□□□□□ -1.91
KCNIP3Q9Y2W7 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 130.1 ms