Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.22□□□□□ -1.73
CLIP2Q9UDT6 AC092574.1-201ENST00000609771 420 ntBASIC4.22□□□□□ -1.73
CLIP2Q9UDT6 AL592295.2-201ENST00000612578 206 ntBASIC4.22□□□□□ -1.73
CLIP2Q9UDT6 AC069209.1-201ENST00000619282 651 ntBASIC4.22□□□□□ -1.73
CLIP2Q9UDT6 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC4.22□□□□□ -1.73
CLIP2Q9UDT6 AP000720.1-201ENST00000625091 483 ntBASIC4.22□□□□□ -1.73
CLIP2Q9UDT6 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
CLIP2Q9UDT6 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CLIP2Q9UDT6 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CLIP2Q9UDT6 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CLIP2Q9UDT6 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.21□□□□□ -1.74
CLIP2Q9UDT6 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
CLIP2Q9UDT6 MIR184-201ENST00000384962 84 ntBASIC4.21□□□□□ -1.74
CLIP2Q9UDT6 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
CLIP2Q9UDT6 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.21□□□□□ -1.74
CLIP2Q9UDT6 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC4.21□□□□□ -1.74
CLIP2Q9UDT6 AL159987.2-201ENST00000432754 307 ntBASIC4.21□□□□□ -1.74
CLIP2Q9UDT6 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.21□□□□□ -1.74
CLIP2Q9UDT6 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC4.21□□□□□ -1.74
CLIP2Q9UDT6 AL138799.3-201ENST00000438968 350 ntBASIC4.21□□□□□ -1.74
CLIP2Q9UDT6 NFU1-207ENST00000462320 558 ntTSL 4 BASIC4.21□□□□□ -1.74
CLIP2Q9UDT6 AL049830.2-201ENST00000480072 201 ntBASIC4.21□□□□□ -1.74
CLIP2Q9UDT6 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.21□□□□□ -1.74
CLIP2Q9UDT6 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC4.21□□□□□ -1.74
CLIP2Q9UDT6 COL6A4P2-205ENST00000509855 506 ntBASIC4.21□□□□□ -1.74
CLIP2Q9UDT6 AC110792.2-201ENST00000510278 224 ntBASIC4.21□□□□□ -1.74
CLIP2Q9UDT6 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.21□□□□□ -1.74
CLIP2Q9UDT6 AC008562.1-201ENST00000521763 330 ntBASIC4.21□□□□□ -1.74
CLIP2Q9UDT6 OR5AP1P-201ENST00000529730 940 ntBASIC4.21□□□□□ -1.74
CLIP2Q9UDT6 AC103843.2-201ENST00000530523 682 ntBASIC4.21□□□□□ -1.74
CLIP2Q9UDT6 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.21□□□□□ -1.74
CLIP2Q9UDT6 AC007458.1-201ENST00000542812 373 ntBASIC4.21□□□□□ -1.74
CLIP2Q9UDT6 AC090751.1-201ENST00000566966 267 ntBASIC4.21□□□□□ -1.74
CLIP2Q9UDT6 AC122134.1-202ENST00000569111 1201 ntBASIC4.21□□□□□ -1.74
CLIP2Q9UDT6 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC4.21□□□□□ -1.74
CLIP2Q9UDT6 KLKP1-201ENST00000595979 403 ntBASIC4.21□□□□□ -1.74
CLIP2Q9UDT6 ZNF92P2-201ENST00000600543 1059 ntBASIC4.21□□□□□ -1.74
CLIP2Q9UDT6 AC006077.1-201ENST00000604746 343 ntBASIC4.21□□□□□ -1.74
CLIP2Q9UDT6 AC012468.1-201ENST00000604888 430 ntBASIC4.21□□□□□ -1.74
CLIP2Q9UDT6 RNA5SP108-201ENST00000605921 117 ntBASIC4.21□□□□□ -1.74
CLIP2Q9UDT6 AC144521.1-201ENST00000607148 956 ntBASIC4.21□□□□□ -1.74
CLIP2Q9UDT6 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.21□□□□□ -1.74
CLIP2Q9UDT6 AL732618.1-201ENST00000623251 301 ntBASIC4.21□□□□□ -1.74
CLIP2Q9UDT6 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC4.21□□□□□ -1.74
CLIP2Q9UDT6 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
CLIP2Q9UDT6 U6.107-201ENST00000637108 79 ntBASIC4.21□□□□□ -1.74
CLIP2Q9UDT6 AC007656.2-201ENST00000624902 4547 ntBASIC4.21□□□□□ -1.74
CLIP2Q9UDT6 AC024341.1-201ENST00000526444 1552 ntBASIC4.21□□□□□ -1.74
CLIP2Q9UDT6 AC000367.1-201ENST00000452711 1766 ntBASIC4.21□□□□□ -1.74
CLIP2Q9UDT6 AL021368.2-201ENST00000606125 5352 ntBASIC4.21□□□□□ -1.74
CLIP2Q9UDT6 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CLIP2Q9UDT6 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CLIP2Q9UDT6 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CLIP2Q9UDT6 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CLIP2Q9UDT6 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CLIP2Q9UDT6 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CLIP2Q9UDT6 MIR490-201ENST00000384865 128 ntBASIC4.2□□□□□ -1.74
CLIP2Q9UDT6 HNRNPDP2-201ENST00000406475 478 ntBASIC4.2□□□□□ -1.74
CLIP2Q9UDT6 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.2□□□□□ -1.74
CLIP2Q9UDT6 BX842559.1-201ENST00000419615 532 ntBASIC4.2□□□□□ -1.74
CLIP2Q9UDT6 AC005189.1-201ENST00000431286 310 ntBASIC4.2□□□□□ -1.74
CLIP2Q9UDT6 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC4.2□□□□□ -1.74
CLIP2Q9UDT6 AC092641.1-201ENST00000440229 772 ntBASIC4.2□□□□□ -1.74
CLIP2Q9UDT6 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.2□□□□□ -1.74
CLIP2Q9UDT6 AL035404.1-201ENST00000497982 568 ntBASIC4.2□□□□□ -1.74
CLIP2Q9UDT6 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC4.2□□□□□ -1.74
CLIP2Q9UDT6 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC4.2□□□□□ -1.74
CLIP2Q9UDT6 AC019227.1-201ENST00000526902 510 ntBASIC4.2□□□□□ -1.74
CLIP2Q9UDT6 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.2□□□□□ -1.74
CLIP2Q9UDT6 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC4.2□□□□□ -1.74
CLIP2Q9UDT6 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC4.2□□□□□ -1.74
CLIP2Q9UDT6 SRGNP1-201ENST00000603392 451 ntBASIC4.2□□□□□ -1.74
CLIP2Q9UDT6 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
CLIP2Q9UDT6 AL392112.1-201ENST00000605115 829 ntBASIC4.2□□□□□ -1.74
CLIP2Q9UDT6 U6.98-201ENST00000637157 84 ntBASIC4.2□□□□□ -1.74
CLIP2Q9UDT6 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CLIP2Q9UDT6 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CLIP2Q9UDT6 SEPT7P7-201ENST00000420492 1301 ntBASIC4.2□□□□□ -1.74
CLIP2Q9UDT6 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CLIP2Q9UDT6 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.19□□□□□ -1.74
CLIP2Q9UDT6 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
CLIP2Q9UDT6 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
CLIP2Q9UDT6 MTATP6P31-201ENST00000406985 692 ntBASIC4.19□□□□□ -1.74
CLIP2Q9UDT6 MTHFD2P2-201ENST00000407725 247 ntBASIC4.19□□□□□ -1.74
CLIP2Q9UDT6 HMGB3P31-201ENST00000413333 595 ntBASIC4.19□□□□□ -1.74
CLIP2Q9UDT6 AL158825.1-201ENST00000414735 521 ntBASIC4.19□□□□□ -1.74
CLIP2Q9UDT6 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
CLIP2Q9UDT6 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.19□□□□□ -1.74
CLIP2Q9UDT6 RNFT1P2-201ENST00000443064 757 ntBASIC4.19□□□□□ -1.74
CLIP2Q9UDT6 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC4.19□□□□□ -1.74
CLIP2Q9UDT6 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC4.19□□□□□ -1.74
CLIP2Q9UDT6 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC4.19□□□□□ -1.74
CLIP2Q9UDT6 SNRPGP3-201ENST00000469405 227 ntBASIC4.19□□□□□ -1.74
CLIP2Q9UDT6 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC4.19□□□□□ -1.74
CLIP2Q9UDT6 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.19□□□□□ -1.74
CLIP2Q9UDT6 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC4.19□□□□□ -1.74
CLIP2Q9UDT6 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC4.19□□□□□ -1.74
CLIP2Q9UDT6 AC026784.1-201ENST00000507986 352 ntBASIC4.19□□□□□ -1.74
CLIP2Q9UDT6 AC133963.2-201ENST00000513686 578 ntBASIC4.19□□□□□ -1.74
CLIP2Q9UDT6 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms