Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 RPL7P51-201ENST00000490532 749 ntBASIC6.2□□□□□ -1.42
CUEDC1Q9NWM3 ENSA-211ENST00000503345 793 ntTSL 3 BASIC6.2□□□□□ -1.42
CUEDC1Q9NWM3 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC6.2□□□□□ -1.42
CUEDC1Q9NWM3 AC026784.1-201ENST00000507986 352 ntBASIC6.2□□□□□ -1.42
CUEDC1Q9NWM3 SNORA74.1-201ENST00000516320 180 ntBASIC6.2□□□□□ -1.42
CUEDC1Q9NWM3 RNU6-1016P-201ENST00000516689 94 ntBASIC6.2□□□□□ -1.42
CUEDC1Q9NWM3 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC6.2□□□□□ -1.42
CUEDC1Q9NWM3 MDM2-233ENST00000545204 398 ntTSL 5 BASIC6.2□□□□□ -1.42
CUEDC1Q9NWM3 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC6.2□□□□□ -1.42
CUEDC1Q9NWM3 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC6.2□□□□□ -1.42
CUEDC1Q9NWM3 SNORD39.3-201ENST00000584451 71 ntBASIC6.2□□□□□ -1.42
CUEDC1Q9NWM3 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.2□□□□□ -1.42
CUEDC1Q9NWM3 AC104687.2-201ENST00000604442 342 ntBASIC6.2□□□□□ -1.42
CUEDC1Q9NWM3 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC6.2□□□□□ -1.42
CUEDC1Q9NWM3 PISRT1.1-201ENST00000616930 107 ntBASIC6.2□□□□□ -1.42
CUEDC1Q9NWM3 uc_338.34-201ENST00000617467 174 ntBASIC6.2□□□□□ -1.42
CUEDC1Q9NWM3 AC092608.2-201ENST00000624427 218 ntBASIC6.2□□□□□ -1.42
CUEDC1Q9NWM3 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CUEDC1Q9NWM3 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
CUEDC1Q9NWM3 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC6.2□□□□□ -1.42
CUEDC1Q9NWM3 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CUEDC1Q9NWM3 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CUEDC1Q9NWM3 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CUEDC1Q9NWM3 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CUEDC1Q9NWM3 AP000432.2-201ENST00000624164 2048 ntBASIC6.2□□□□□ -1.42
CUEDC1Q9NWM3 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CUEDC1Q9NWM3 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.2□□□□□ -1.42
CUEDC1Q9NWM3 SELE-204ENST00000367776 3576 ntTSL 5 BASIC6.19□□□□□ -1.42
CUEDC1Q9NWM3 SELE-205ENST00000367777 3576 ntTSL 5 BASIC6.19□□□□□ -1.42
CUEDC1Q9NWM3 ST7-212ENST00000422922 1887 ntTSL 5 BASIC6.19□□□□□ -1.42
CUEDC1Q9NWM3 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CUEDC1Q9NWM3 EEF1A1P24-201ENST00000451469 1378 ntBASIC6.19□□□□□ -1.42
CUEDC1Q9NWM3 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CUEDC1Q9NWM3 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.19□□□□□ -1.42
CUEDC1Q9NWM3 AC011933.2-201ENST00000578539 2790 ntBASIC6.19□□□□□ -1.42
CUEDC1Q9NWM3 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CUEDC1Q9NWM3 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CUEDC1Q9NWM3 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.19□□□□□ -1.42
CUEDC1Q9NWM3 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.19□□□□□ -1.42
CUEDC1Q9NWM3 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CUEDC1Q9NWM3 AC010615.1-201ENST00000594254 1764 ntBASIC6.19□□□□□ -1.42
CUEDC1Q9NWM3 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
CUEDC1Q9NWM3 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CUEDC1Q9NWM3 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.19□□□□□ -1.42
CUEDC1Q9NWM3 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC6.19□□□□□ -1.42
CUEDC1Q9NWM3 RNA5SP514-201ENST00000363717 111 ntBASIC6.19□□□□□ -1.42
CUEDC1Q9NWM3 SNORD116-11-201ENST00000383882 92 ntBASIC6.19□□□□□ -1.42
CUEDC1Q9NWM3 Y_RNA.428-201ENST00000384078 102 ntBASIC6.19□□□□□ -1.42
CUEDC1Q9NWM3 RNU6-823P-201ENST00000391042 103 ntBASIC6.19□□□□□ -1.42
CUEDC1Q9NWM3 AL031679.1-201ENST00000400616 525 ntBASIC6.19□□□□□ -1.42
CUEDC1Q9NWM3 RNU4-25P-201ENST00000410569 230 ntBASIC6.19□□□□□ -1.42
CUEDC1Q9NWM3 AL591848.1-201ENST00000413092 322 ntBASIC6.19□□□□□ -1.42
CUEDC1Q9NWM3 MTCO3P19-201ENST00000415864 321 ntBASIC6.19□□□□□ -1.42
CUEDC1Q9NWM3 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC6.19□□□□□ -1.42
CUEDC1Q9NWM3 ACTR3BP6-201ENST00000422332 1241 ntBASIC6.19□□□□□ -1.42
CUEDC1Q9NWM3 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CUEDC1Q9NWM3 AC007679.3-201ENST00000434035 414 ntBASIC6.19□□□□□ -1.42
CUEDC1Q9NWM3 MTND5P15-201ENST00000434246 349 ntBASIC6.19□□□□□ -1.42
CUEDC1Q9NWM3 RPS17P8-201ENST00000434525 335 ntBASIC6.19□□□□□ -1.42
CUEDC1Q9NWM3 AL451136.1-201ENST00000435399 325 ntBASIC6.19□□□□□ -1.42
CUEDC1Q9NWM3 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC6.19□□□□□ -1.42
CUEDC1Q9NWM3 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC6.19□□□□□ -1.42
CUEDC1Q9NWM3 RN7SL39P-201ENST00000462264 297 ntBASIC6.19□□□□□ -1.42
CUEDC1Q9NWM3 RPS4XP14-201ENST00000493072 781 ntBASIC6.19□□□□□ -1.42
CUEDC1Q9NWM3 AC092436.1-201ENST00000506450 503 ntBASIC6.19□□□□□ -1.42
CUEDC1Q9NWM3 SLC25A15P5-201ENST00000508033 253 ntBASIC6.19□□□□□ -1.42
CUEDC1Q9NWM3 RNA5SP418-201ENST00000515951 117 ntBASIC6.19□□□□□ -1.42
CUEDC1Q9NWM3 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC6.19□□□□□ -1.42
CUEDC1Q9NWM3 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC6.19□□□□□ -1.42
CUEDC1Q9NWM3 AP003497.1-201ENST00000528472 562 ntBASIC6.19□□□□□ -1.42
CUEDC1Q9NWM3 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC6.19□□□□□ -1.42
CUEDC1Q9NWM3 AP003385.6-201ENST00000531603 374 ntBASIC6.19□□□□□ -1.42
CUEDC1Q9NWM3 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC6.19□□□□□ -1.42
CUEDC1Q9NWM3 AC068993.1-201ENST00000546724 589 ntBASIC6.19□□□□□ -1.42
CUEDC1Q9NWM3 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC6.19□□□□□ -1.42
CUEDC1Q9NWM3 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC6.19□□□□□ -1.42
CUEDC1Q9NWM3 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC6.19□□□□□ -1.42
CUEDC1Q9NWM3 MIR4775-201ENST00000581168 75 ntBASIC6.19□□□□□ -1.42
CUEDC1Q9NWM3 MIR3128-201ENST00000581957 66 ntBASIC6.19□□□□□ -1.42
CUEDC1Q9NWM3 AL353997.4-201ENST00000586196 166 ntBASIC6.19□□□□□ -1.42
CUEDC1Q9NWM3 AC063977.7-201ENST00000594454 337 ntBASIC6.19□□□□□ -1.42
CUEDC1Q9NWM3 AC104662.1-201ENST00000604448 511 ntBASIC6.19□□□□□ -1.42
CUEDC1Q9NWM3 AC010378.1-201ENST00000619270 362 ntBASIC6.19□□□□□ -1.42
CUEDC1Q9NWM3 MPP6-209ENST00000625307 126 ntTSL 5 BASIC6.19□□□□□ -1.42
CUEDC1Q9NWM3 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC6.19□□□□□ -1.42
CUEDC1Q9NWM3 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC6.19□□□□□ -1.42
CUEDC1Q9NWM3 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CUEDC1Q9NWM3 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC6.19□□□□□ -1.42
CUEDC1Q9NWM3 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
CUEDC1Q9NWM3 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CUEDC1Q9NWM3 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CUEDC1Q9NWM3 ANAPC1P1-201ENST00000426186 2145 ntBASIC6.19□□□□□ -1.42
CUEDC1Q9NWM3 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CUEDC1Q9NWM3 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CUEDC1Q9NWM3 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CUEDC1Q9NWM3 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.18□□□□□ -1.42
CUEDC1Q9NWM3 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
CUEDC1Q9NWM3 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
CUEDC1Q9NWM3 KPNA2P2-201ENST00000419546 1489 ntBASIC6.18□□□□□ -1.42
CUEDC1Q9NWM3 RNU6-1252P-201ENST00000363054 104 ntBASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms