Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 AC239809.1-201ENST00000450470 217 ntBASIC4.62□□□□□ -1.67
USP29Q9HBJ7 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC4.62□□□□□ -1.67
USP29Q9HBJ7 RPL18AP17-201ENST00000455326 198 ntBASIC4.62□□□□□ -1.67
USP29Q9HBJ7 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.62□□□□□ -1.67
USP29Q9HBJ7 RPL5P30-201ENST00000465511 891 ntBASIC4.62□□□□□ -1.67
USP29Q9HBJ7 RN7SL41P-201ENST00000476144 297 ntBASIC4.62□□□□□ -1.67
USP29Q9HBJ7 AC068724.1-201ENST00000487100 792 ntBASIC4.62□□□□□ -1.67
USP29Q9HBJ7 MTATP6P22-201ENST00000507369 598 ntBASIC4.62□□□□□ -1.67
USP29Q9HBJ7 AC093281.2-201ENST00000510153 597 ntBASIC4.62□□□□□ -1.67
USP29Q9HBJ7 MTCO1P30-201ENST00000515244 580 ntBASIC4.62□□□□□ -1.67
USP29Q9HBJ7 AC060788.1-201ENST00000521318 469 ntBASIC4.62□□□□□ -1.67
USP29Q9HBJ7 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC4.62□□□□□ -1.67
USP29Q9HBJ7 DYNLL1P4-201ENST00000549314 266 ntBASIC4.62□□□□□ -1.67
USP29Q9HBJ7 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC4.62□□□□□ -1.67
USP29Q9HBJ7 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.62□□□□□ -1.67
USP29Q9HBJ7 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.62□□□□□ -1.67
USP29Q9HBJ7 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.62□□□□□ -1.67
USP29Q9HBJ7 AC020914.6-201ENST00000594327 272 ntBASIC4.62□□□□□ -1.67
USP29Q9HBJ7 LINC00901.1-201ENST00000617252 152 ntBASIC4.62□□□□□ -1.67
USP29Q9HBJ7 AC009704.2-201ENST00000618739 483 ntBASIC4.62□□□□□ -1.67
USP29Q9HBJ7 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
USP29Q9HBJ7 AC008443.7-201ENST00000622195 246 ntBASIC4.62□□□□□ -1.67
USP29Q9HBJ7 AC127502.3-201ENST00000636170 1206 ntBASIC4.62□□□□□ -1.67
USP29Q9HBJ7 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.62□□□□□ -1.67
USP29Q9HBJ7 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.62□□□□□ -1.67
USP29Q9HBJ7 AC139713.2-215ENST00000641428 5037 ntBASIC4.62□□□□□ -1.67
USP29Q9HBJ7 AC093535.2-201ENST00000624769 2326 ntBASIC4.62□□□□□ -1.67
USP29Q9HBJ7 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
USP29Q9HBJ7 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
USP29Q9HBJ7 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.61□□□□□ -1.67
USP29Q9HBJ7 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
USP29Q9HBJ7 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
USP29Q9HBJ7 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
USP29Q9HBJ7 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
USP29Q9HBJ7 RNU6-216P-201ENST00000363282 104 ntBASIC4.61□□□□□ -1.67
USP29Q9HBJ7 RNA5SP447-201ENST00000363749 119 ntBASIC4.61□□□□□ -1.67
USP29Q9HBJ7 Y_RNA.553-201ENST00000384670 102 ntBASIC4.61□□□□□ -1.67
USP29Q9HBJ7 RPL23AP29-201ENST00000397284 453 ntBASIC4.61□□□□□ -1.67
USP29Q9HBJ7 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
USP29Q9HBJ7 AC233981.1-201ENST00000423224 461 ntBASIC4.61□□□□□ -1.67
USP29Q9HBJ7 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.61□□□□□ -1.67
USP29Q9HBJ7 IFNNP1-201ENST00000429219 553 ntBASIC4.61□□□□□ -1.67
USP29Q9HBJ7 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC4.61□□□□□ -1.67
USP29Q9HBJ7 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC4.61□□□□□ -1.67
USP29Q9HBJ7 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.61□□□□□ -1.67
USP29Q9HBJ7 RPL23AP93-201ENST00000440847 484 ntBASIC4.61□□□□□ -1.67
USP29Q9HBJ7 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.61□□□□□ -1.67
USP29Q9HBJ7 AC012671.1-201ENST00000451912 203 ntBASIC4.61□□□□□ -1.67
USP29Q9HBJ7 AC009963.2-201ENST00000453431 138 ntBASIC4.61□□□□□ -1.67
USP29Q9HBJ7 KATNBL1P6-201ENST00000453433 915 ntBASIC4.61□□□□□ -1.67
USP29Q9HBJ7 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.61□□□□□ -1.67
USP29Q9HBJ7 RNU6-202P-201ENST00000515998 96 ntBASIC4.61□□□□□ -1.67
USP29Q9HBJ7 Y_RNA.695-201ENST00000516715 107 ntBASIC4.61□□□□□ -1.67
USP29Q9HBJ7 MYL12AP1-201ENST00000518490 515 ntBASIC4.61□□□□□ -1.67
USP29Q9HBJ7 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC4.61□□□□□ -1.67
USP29Q9HBJ7 SLC2A13P1-201ENST00000531560 322 ntBASIC4.61□□□□□ -1.67
USP29Q9HBJ7 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC4.61□□□□□ -1.67
USP29Q9HBJ7 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.61□□□□□ -1.67
USP29Q9HBJ7 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.61□□□□□ -1.67
USP29Q9HBJ7 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.61□□□□□ -1.67
USP29Q9HBJ7 AC017100.2-201ENST00000584628 355 ntBASIC4.61□□□□□ -1.67
USP29Q9HBJ7 AC008759.1-201ENST00000589783 983 ntBASIC4.61□□□□□ -1.67
USP29Q9HBJ7 AL133338.2-201ENST00000604292 736 ntBASIC4.61□□□□□ -1.67
USP29Q9HBJ7 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.61□□□□□ -1.67
USP29Q9HBJ7 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
USP29Q9HBJ7 MIR6891-201ENST00000618788 93 ntBASIC4.61□□□□□ -1.67
USP29Q9HBJ7 AC026585.1-201ENST00000619582 524 ntBASIC4.61□□□□□ -1.67
USP29Q9HBJ7 AP005019.3-201ENST00000620418 560 ntBASIC4.61□□□□□ -1.67
USP29Q9HBJ7 MIR7154-201ENST00000620673 73 ntBASIC4.61□□□□□ -1.67
USP29Q9HBJ7 AC090582.1-201ENST00000636321 199 ntBASIC4.61□□□□□ -1.67
USP29Q9HBJ7 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.61□□□□□ -1.67
USP29Q9HBJ7 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
USP29Q9HBJ7 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
USP29Q9HBJ7 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
USP29Q9HBJ7 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
USP29Q9HBJ7 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.6□□□□□ -1.67
USP29Q9HBJ7 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
USP29Q9HBJ7 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
USP29Q9HBJ7 AC139713.2-214ENST00000642059 1811 ntBASIC4.6□□□□□ -1.67
USP29Q9HBJ7 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
USP29Q9HBJ7 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.6□□□□□ -1.67
USP29Q9HBJ7 AC016716.1-201ENST00000265882 708 ntBASIC4.6□□□□□ -1.67
USP29Q9HBJ7 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
USP29Q9HBJ7 Y_RNA.18-201ENST00000362461 102 ntBASIC4.6□□□□□ -1.67
USP29Q9HBJ7 RN7SKP224-201ENST00000364140 325 ntBASIC4.6□□□□□ -1.67
USP29Q9HBJ7 RNA5SP22-201ENST00000365393 109 ntBASIC4.6□□□□□ -1.67
USP29Q9HBJ7 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.6□□□□□ -1.67
USP29Q9HBJ7 RNU1-44P-201ENST00000384453 163 ntBASIC4.6□□□□□ -1.67
USP29Q9HBJ7 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.6□□□□□ -1.67
USP29Q9HBJ7 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
USP29Q9HBJ7 LAP3P1-201ENST00000403648 294 ntBASIC4.6□□□□□ -1.67
USP29Q9HBJ7 MTCO3P31-201ENST00000405526 789 ntBASIC4.6□□□□□ -1.67
USP29Q9HBJ7 Y_RNA.599-201ENST00000410489 109 ntBASIC4.6□□□□□ -1.67
USP29Q9HBJ7 RPS15AP38-201ENST00000413110 372 ntBASIC4.6□□□□□ -1.67
USP29Q9HBJ7 RPL23AP39-201ENST00000415533 405 ntBASIC4.6□□□□□ -1.67
USP29Q9HBJ7 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC4.6□□□□□ -1.67
USP29Q9HBJ7 AL590609.2-201ENST00000421430 368 ntBASIC4.6□□□□□ -1.67
USP29Q9HBJ7 MTCO3P1-205ENST00000422088 832 ntBASIC4.6□□□□□ -1.67
USP29Q9HBJ7 AL592293.2-201ENST00000422292 996 ntBASIC4.6□□□□□ -1.67
USP29Q9HBJ7 RSL24D1P6-201ENST00000426934 401 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 123.4 ms