Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 RNA5SP208-201ENST00000516156 78 ntBASIC3.67□□□□□ -1.82
CCDC28BQ9BUN5 RN7SKP265-201ENST00000516448 223 ntBASIC3.67□□□□□ -1.82
CCDC28BQ9BUN5 RNA5SP380-201ENST00000517190 98 ntBASIC3.67□□□□□ -1.82
CCDC28BQ9BUN5 AC008562.1-201ENST00000521763 330 ntBASIC3.67□□□□□ -1.82
CCDC28BQ9BUN5 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC28BQ9BUN5 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.67□□□□□ -1.82
CCDC28BQ9BUN5 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC3.67□□□□□ -1.82
CCDC28BQ9BUN5 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC28BQ9BUN5 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC3.67□□□□□ -1.82
CCDC28BQ9BUN5 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.67□□□□□ -1.82
CCDC28BQ9BUN5 AC006960.3-201ENST00000561845 705 ntBASIC3.67□□□□□ -1.82
CCDC28BQ9BUN5 AC090751.1-201ENST00000566966 267 ntBASIC3.67□□□□□ -1.82
CCDC28BQ9BUN5 AGGF1P5-201ENST00000567900 919 ntBASIC3.67□□□□□ -1.82
CCDC28BQ9BUN5 AC006270.2-201ENST00000578523 652 ntBASIC3.67□□□□□ -1.82
CCDC28BQ9BUN5 RN7SL753P-201ENST00000581238 290 ntBASIC3.67□□□□□ -1.82
CCDC28BQ9BUN5 RN7SL600P-201ENST00000581811 299 ntBASIC3.67□□□□□ -1.82
CCDC28BQ9BUN5 AC067852.4-201ENST00000590314 478 ntBASIC3.67□□□□□ -1.82
CCDC28BQ9BUN5 AL445435.1-201ENST00000604232 665 ntBASIC3.67□□□□□ -1.82
CCDC28BQ9BUN5 AC107294.3-201ENST00000609211 526 ntBASIC3.67□□□□□ -1.82
CCDC28BQ9BUN5 AC114781.5-201ENST00000615297 108 ntBASIC3.67□□□□□ -1.82
CCDC28BQ9BUN5 AC099669.2-201ENST00000616549 437 ntBASIC3.67□□□□□ -1.82
CCDC28BQ9BUN5 AC010975.3-201ENST00000618727 978 ntBASIC3.67□□□□□ -1.82
CCDC28BQ9BUN5 VN1R7P-201ENST00000619242 903 ntBASIC3.67□□□□□ -1.82
CCDC28BQ9BUN5 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC3.67□□□□□ -1.82
CCDC28BQ9BUN5 CDRT1-208ENST00000630868 794 ntBASIC3.67□□□□□ -1.82
CCDC28BQ9BUN5 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC28BQ9BUN5 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC28BQ9BUN5 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC28BQ9BUN5 SEPT7P7-201ENST00000420492 1301 ntBASIC3.67□□□□□ -1.82
CCDC28BQ9BUN5 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
CCDC28BQ9BUN5 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC28BQ9BUN5 AC111188.2-201ENST00000529697 1387 ntBASIC3.66□□□□□ -1.82
CCDC28BQ9BUN5 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC28BQ9BUN5 RNU6-224P-201ENST00000384055 107 ntBASIC3.66□□□□□ -1.82
CCDC28BQ9BUN5 SNORA51.12-201ENST00000384448 134 ntBASIC3.66□□□□□ -1.82
CCDC28BQ9BUN5 AL133270.1-201ENST00000402635 279 ntBASIC3.66□□□□□ -1.82
CCDC28BQ9BUN5 MTHFD2P2-201ENST00000407725 247 ntBASIC3.66□□□□□ -1.82
CCDC28BQ9BUN5 RNU2-6P-201ENST00000411404 190 ntBASIC3.66□□□□□ -1.82
CCDC28BQ9BUN5 AL592310.1-201ENST00000414330 671 ntBASIC3.66□□□□□ -1.82
CCDC28BQ9BUN5 Z97055.1-201ENST00000419730 712 ntBASIC3.66□□□□□ -1.82
CCDC28BQ9BUN5 AC009965.2-201ENST00000425328 970 ntBASIC3.66□□□□□ -1.82
CCDC28BQ9BUN5 AC092648.1-201ENST00000425870 423 ntBASIC3.66□□□□□ -1.82
CCDC28BQ9BUN5 AC006989.1-201ENST00000427212 131 ntBASIC3.66□□□□□ -1.82
CCDC28BQ9BUN5 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC3.66□□□□□ -1.82
CCDC28BQ9BUN5 Z74696.2-201ENST00000436514 498 ntBASIC3.66□□□□□ -1.82
CCDC28BQ9BUN5 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC3.66□□□□□ -1.82
CCDC28BQ9BUN5 TPTE2P6-202ENST00000445572 1007 ntBASIC3.66□□□□□ -1.82
CCDC28BQ9BUN5 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC3.66□□□□□ -1.82
CCDC28BQ9BUN5 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.66□□□□□ -1.82
CCDC28BQ9BUN5 RPL35AP28-201ENST00000459730 331 ntBASIC3.66□□□□□ -1.82
CCDC28BQ9BUN5 AC073522.1-201ENST00000483312 377 ntBASIC3.66□□□□□ -1.82
CCDC28BQ9BUN5 RPL32P9-201ENST00000487963 407 ntBASIC3.66□□□□□ -1.82
CCDC28BQ9BUN5 AC134050.1-201ENST00000495088 933 ntBASIC3.66□□□□□ -1.82
CCDC28BQ9BUN5 AC020699.1-201ENST00000505161 445 ntBASIC3.66□□□□□ -1.82
CCDC28BQ9BUN5 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.66□□□□□ -1.82
CCDC28BQ9BUN5 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC3.66□□□□□ -1.82
CCDC28BQ9BUN5 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC3.66□□□□□ -1.82
CCDC28BQ9BUN5 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC3.66□□□□□ -1.82
CCDC28BQ9BUN5 OR5AP1P-201ENST00000529730 940 ntBASIC3.66□□□□□ -1.82
CCDC28BQ9BUN5 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC28BQ9BUN5 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC3.66□□□□□ -1.82
CCDC28BQ9BUN5 AL845331.3-202ENST00000562856 261 ntBASIC3.66□□□□□ -1.82
CCDC28BQ9BUN5 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.66□□□□□ -1.82
CCDC28BQ9BUN5 MTND4LP24-201ENST00000572277 291 ntBASIC3.66□□□□□ -1.82
CCDC28BQ9BUN5 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.66□□□□□ -1.82
CCDC28BQ9BUN5 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC3.66□□□□□ -1.82
CCDC28BQ9BUN5 IPO5P1-202ENST00000600039 287 ntBASIC3.66□□□□□ -1.82
CCDC28BQ9BUN5 NTAN1P1-201ENST00000603150 646 ntBASIC3.66□□□□□ -1.82
CCDC28BQ9BUN5 AL138478.1-201ENST00000612252 832 ntBASIC3.66□□□□□ -1.82
CCDC28BQ9BUN5 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC28BQ9BUN5 AC079684.1-201ENST00000621405 437 ntBASIC3.66□□□□□ -1.82
CCDC28BQ9BUN5 AC073530.2-201ENST00000623987 261 ntBASIC3.66□□□□□ -1.82
CCDC28BQ9BUN5 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
CCDC28BQ9BUN5 POMP-202ENST00000460403 1428 ntTSL 3 BASIC3.66□□□□□ -1.82
CCDC28BQ9BUN5 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC28BQ9BUN5 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.65□□□□□ -1.82
CCDC28BQ9BUN5 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
CCDC28BQ9BUN5 AL133383.2-201ENST00000622958 2336 ntBASIC3.65□□□□□ -1.82
CCDC28BQ9BUN5 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.65□□□□□ -1.82
CCDC28BQ9BUN5 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.65□□□□□ -1.82
CCDC28BQ9BUN5 AC099786.3-201ENST00000565735 1410 ntBASIC3.65□□□□□ -1.83
CCDC28BQ9BUN5 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CCDC28BQ9BUN5 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
CCDC28BQ9BUN5 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
CCDC28BQ9BUN5 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.65□□□□□ -1.83
CCDC28BQ9BUN5 AP002088.1-201ENST00000382740 395 ntBASIC3.65□□□□□ -1.83
CCDC28BQ9BUN5 RNU6-906P-201ENST00000384700 70 ntBASIC3.65□□□□□ -1.83
CCDC28BQ9BUN5 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.65□□□□□ -1.83
CCDC28BQ9BUN5 RNA5SP31-201ENST00000411144 127 ntBASIC3.65□□□□□ -1.83
CCDC28BQ9BUN5 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC3.65□□□□□ -1.83
CCDC28BQ9BUN5 AC027644.1-201ENST00000419595 298 ntBASIC3.65□□□□□ -1.83
CCDC28BQ9BUN5 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC3.65□□□□□ -1.83
CCDC28BQ9BUN5 RPL21P110-201ENST00000433345 446 ntBASIC3.65□□□□□ -1.83
CCDC28BQ9BUN5 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC3.65□□□□□ -1.83
CCDC28BQ9BUN5 B3GNT2P1-201ENST00000434960 952 ntBASIC3.65□□□□□ -1.83
CCDC28BQ9BUN5 AC125238.1-201ENST00000448842 249 ntBASIC3.65□□□□□ -1.83
CCDC28BQ9BUN5 ZNF886P-201ENST00000450781 723 ntBASIC3.65□□□□□ -1.83
CCDC28BQ9BUN5 AC098826.2-201ENST00000452011 651 ntBASIC3.65□□□□□ -1.83
CCDC28BQ9BUN5 OFD1P7Y-201ENST00000454643 1155 ntBASIC3.65□□□□□ -1.83
CCDC28BQ9BUN5 AC092155.2-201ENST00000454675 477 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms