Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 ADI1P3-201ENST00000549509 470 ntBASIC4.12□□□□□ -1.75
NOTCH4Q99466 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.12□□□□□ -1.75
NOTCH4Q99466 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.12□□□□□ -1.75
NOTCH4Q99466 AC019176.2-201ENST00000611579 315 ntBASIC4.12□□□□□ -1.75
NOTCH4Q99466 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
NOTCH4Q99466 AC099654.10-201ENST00000640395 161 ntBASIC4.12□□□□□ -1.75
NOTCH4Q99466 AC009093.8-201ENST00000641769 292 ntBASIC4.12□□□□□ -1.75
NOTCH4Q99466 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.12□□□□□ -1.75
NOTCH4Q99466 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
NOTCH4Q99466 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
NOTCH4Q99466 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
NOTCH4Q99466 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
NOTCH4Q99466 MTND4P23-201ENST00000447723 1363 ntBASIC4.12□□□□□ -1.75
NOTCH4Q99466 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
NOTCH4Q99466 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.12□□□□□ -1.75
NOTCH4Q99466 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
NOTCH4Q99466 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
NOTCH4Q99466 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
NOTCH4Q99466 Y_RNA.578-201ENST00000390903 88 ntBASIC4.12□□□□□ -1.75
NOTCH4Q99466 PGBD4P8-201ENST00000412993 562 ntBASIC4.12□□□□□ -1.75
NOTCH4Q99466 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC4.12□□□□□ -1.75
NOTCH4Q99466 ISCA1P1-201ENST00000426679 387 ntBASIC4.12□□□□□ -1.75
NOTCH4Q99466 AL050321.1-201ENST00000432363 400 ntBASIC4.12□□□□□ -1.75
NOTCH4Q99466 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.12□□□□□ -1.75
NOTCH4Q99466 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.12□□□□□ -1.75
NOTCH4Q99466 MTND4LP16-201ENST00000440828 295 ntBASIC4.12□□□□□ -1.75
NOTCH4Q99466 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC4.12□□□□□ -1.75
NOTCH4Q99466 FABP3P2-201ENST00000453169 399 ntBASIC4.12□□□□□ -1.75
NOTCH4Q99466 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC4.12□□□□□ -1.75
NOTCH4Q99466 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC4.12□□□□□ -1.75
NOTCH4Q99466 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC4.12□□□□□ -1.75
NOTCH4Q99466 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
NOTCH4Q99466 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
NOTCH4Q99466 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC4.12□□□□□ -1.75
NOTCH4Q99466 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC4.12□□□□□ -1.75
NOTCH4Q99466 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
NOTCH4Q99466 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC4.12□□□□□ -1.75
NOTCH4Q99466 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.12□□□□□ -1.75
NOTCH4Q99466 AC006499.6-201ENST00000511169 607 ntBASIC4.12□□□□□ -1.75
NOTCH4Q99466 HIGD1AP18-201ENST00000520730 278 ntBASIC4.12□□□□□ -1.75
NOTCH4Q99466 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
NOTCH4Q99466 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC4.12□□□□□ -1.75
NOTCH4Q99466 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC4.12□□□□□ -1.75
NOTCH4Q99466 AC063950.1-201ENST00000552036 308 ntBASIC4.12□□□□□ -1.75
NOTCH4Q99466 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC4.12□□□□□ -1.75
NOTCH4Q99466 RPS3AP4-201ENST00000555161 764 ntBASIC4.12□□□□□ -1.75
NOTCH4Q99466 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC4.12□□□□□ -1.75
NOTCH4Q99466 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC4.12□□□□□ -1.75
NOTCH4Q99466 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.12□□□□□ -1.75
NOTCH4Q99466 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC4.12□□□□□ -1.75
NOTCH4Q99466 AC244505.7-201ENST00000599675 272 ntBASIC4.12□□□□□ -1.75
NOTCH4Q99466 AC072046.2-201ENST00000618366 268 ntBASIC4.12□□□□□ -1.75
NOTCH4Q99466 AC109454.4-201ENST00000623411 649 ntBASIC4.12□□□□□ -1.75
NOTCH4Q99466 MIR4278-201ENST00000636094 69 ntBASIC4.12□□□□□ -1.75
NOTCH4Q99466 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.12□□□□□ -1.75
NOTCH4Q99466 MFSD8-245ENST00000641743 948 ntBASIC4.12□□□□□ -1.75
NOTCH4Q99466 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
NOTCH4Q99466 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
NOTCH4Q99466 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.11□□□□□ -1.75
NOTCH4Q99466 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
NOTCH4Q99466 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.11□□□□□ -1.75
NOTCH4Q99466 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NOTCH4Q99466 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
NOTCH4Q99466 CR381670.1-201ENST00000624291 1693 ntBASIC4.11□□□□□ -1.75
NOTCH4Q99466 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NOTCH4Q99466 Y_RNA.333-201ENST00000365274 102 ntBASIC4.11□□□□□ -1.75
NOTCH4Q99466 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
NOTCH4Q99466 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
NOTCH4Q99466 RNU6-1005P-201ENST00000384519 107 ntBASIC4.11□□□□□ -1.75
NOTCH4Q99466 AL590084.2-201ENST00000401481 382 ntBASIC4.11□□□□□ -1.75
NOTCH4Q99466 NPM1P38-201ENST00000403835 865 ntBASIC4.11□□□□□ -1.75
NOTCH4Q99466 RNU4-74P-201ENST00000411280 161 ntBASIC4.11□□□□□ -1.75
NOTCH4Q99466 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC4.11□□□□□ -1.75
NOTCH4Q99466 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
NOTCH4Q99466 EPS15P1-201ENST00000448836 336 ntBASIC4.11□□□□□ -1.75
NOTCH4Q99466 RPS17P13-201ENST00000448974 407 ntBASIC4.11□□□□□ -1.75
NOTCH4Q99466 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.11□□□□□ -1.75
NOTCH4Q99466 AC026782.2-201ENST00000510845 636 ntBASIC4.11□□□□□ -1.75
NOTCH4Q99466 RNU1-95P-201ENST00000516357 160 ntBASIC4.11□□□□□ -1.75
NOTCH4Q99466 RNU1-128P-201ENST00000516704 160 ntBASIC4.11□□□□□ -1.75
NOTCH4Q99466 RNU7-143P-201ENST00000516781 65 ntBASIC4.11□□□□□ -1.75
NOTCH4Q99466 MTCO3P15-201ENST00000526563 574 ntBASIC4.11□□□□□ -1.75
NOTCH4Q99466 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC4.11□□□□□ -1.75
NOTCH4Q99466 AC100770.1-201ENST00000532310 322 ntBASIC4.11□□□□□ -1.75
NOTCH4Q99466 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.11□□□□□ -1.75
NOTCH4Q99466 ZNF519P3-201ENST00000557158 1032 ntBASIC4.11□□□□□ -1.75
NOTCH4Q99466 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC4.11□□□□□ -1.75
NOTCH4Q99466 ANKRD36BP2-206ENST00000575193 1245 ntBASIC4.11□□□□□ -1.75
NOTCH4Q99466 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC4.11□□□□□ -1.75
NOTCH4Q99466 AL583832.1-201ENST00000603227 784 ntBASIC4.11□□□□□ -1.75
NOTCH4Q99466 AC091946.2-201ENST00000606105 291 ntBASIC4.11□□□□□ -1.75
NOTCH4Q99466 AC096577.2-201ENST00000611455 153 ntBASIC4.11□□□□□ -1.75
NOTCH4Q99466 AC008083.4-201ENST00000615076 444 ntBASIC4.11□□□□□ -1.75
NOTCH4Q99466 AC063943.3-201ENST00000615562 356 ntBASIC4.11□□□□□ -1.75
NOTCH4Q99466 AL356321.1-201ENST00000621360 228 ntBASIC4.11□□□□□ -1.75
NOTCH4Q99466 AC012078.1-201ENST00000405035 1646 ntBASIC4.11□□□□□ -1.75
NOTCH4Q99466 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
NOTCH4Q99466 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.11□□□□□ -1.75
NOTCH4Q99466 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
NOTCH4Q99466 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms