Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 RPL21P23-201ENST00000446654 460 ntBASIC3.52□□□□□ -1.85
C9orf72Q96LT7 HMGN2P21-201ENST00000447764 270 ntBASIC3.52□□□□□ -1.85
C9orf72Q96LT7 PRDX3P3-201ENST00000447765 522 ntBASIC3.52□□□□□ -1.85
C9orf72Q96LT7 PRSS3P4-201ENST00000453323 162 ntBASIC3.52□□□□□ -1.85
C9orf72Q96LT7 HMGN1P18-201ENST00000457642 277 ntBASIC3.52□□□□□ -1.85
C9orf72Q96LT7 SNRPGP3-201ENST00000469405 227 ntBASIC3.52□□□□□ -1.85
C9orf72Q96LT7 AP000893.1-201ENST00000474462 794 ntBASIC3.52□□□□□ -1.85
C9orf72Q96LT7 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.52□□□□□ -1.85
C9orf72Q96LT7 AC023141.12-201ENST00000512399 199 ntBASIC3.52□□□□□ -1.85
C9orf72Q96LT7 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC3.52□□□□□ -1.85
C9orf72Q96LT7 AC107934.2-201ENST00000518653 310 ntBASIC3.52□□□□□ -1.85
C9orf72Q96LT7 HIGD1AP10-201ENST00000527837 282 ntBASIC3.52□□□□□ -1.85
C9orf72Q96LT7 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.52□□□□□ -1.85
C9orf72Q96LT7 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.52□□□□□ -1.85
C9orf72Q96LT7 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC3.52□□□□□ -1.85
C9orf72Q96LT7 AC025260.1-201ENST00000548858 430 ntBASIC3.52□□□□□ -1.85
C9orf72Q96LT7 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.52□□□□□ -1.85
C9orf72Q96LT7 AC022146.1-201ENST00000595307 847 ntBASIC3.52□□□□□ -1.85
C9orf72Q96LT7 CR589904.2-201ENST00000612533 440 ntBASIC3.52□□□□□ -1.85
C9orf72Q96LT7 AC009032.1-201ENST00000617574 431 ntBASIC3.52□□□□□ -1.85
C9orf72Q96LT7 MIR4278-201ENST00000636094 69 ntBASIC3.52□□□□□ -1.85
C9orf72Q96LT7 AC244258.1-201ENST00000637553 1071 ntBASIC3.52□□□□□ -1.85
C9orf72Q96LT7 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC3.52□□□□□ -1.85
C9orf72Q96LT7 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
C9orf72Q96LT7 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
C9orf72Q96LT7 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.52□□□□□ -1.85
C9orf72Q96LT7 AC007496.3-201ENST00000624987 3443 ntBASIC3.52□□□□□ -1.85
C9orf72Q96LT7 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.52□□□□□ -1.85
C9orf72Q96LT7 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
C9orf72Q96LT7 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
C9orf72Q96LT7 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
C9orf72Q96LT7 RNA5SP387-201ENST00000364226 106 ntBASIC3.51□□□□□ -1.85
C9orf72Q96LT7 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
C9orf72Q96LT7 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
C9orf72Q96LT7 SNORA70E-201ENST00000384492 135 ntBASIC3.51□□□□□ -1.85
C9orf72Q96LT7 MIR1303-201ENST00000408625 86 ntBASIC3.51□□□□□ -1.85
C9orf72Q96LT7 RNA5SP107-201ENST00000411358 122 ntBASIC3.51□□□□□ -1.85
C9orf72Q96LT7 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.51□□□□□ -1.85
C9orf72Q96LT7 AC245052.5-201ENST00000416320 649 ntBASIC3.51□□□□□ -1.85
C9orf72Q96LT7 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.51□□□□□ -1.85
C9orf72Q96LT7 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.51□□□□□ -1.85
C9orf72Q96LT7 CYCSP4-201ENST00000429682 331 ntBASIC3.51□□□□□ -1.85
C9orf72Q96LT7 TRBV8-2-201ENST00000475637 270 ntBASIC3.51□□□□□ -1.85
C9orf72Q96LT7 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.51□□□□□ -1.85
C9orf72Q96LT7 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.51□□□□□ -1.85
C9orf72Q96LT7 AC005351.1-201ENST00000511152 786 ntBASIC3.51□□□□□ -1.85
C9orf72Q96LT7 PTGES3P3-201ENST00000511479 482 ntBASIC3.51□□□□□ -1.85
C9orf72Q96LT7 RN7SKP13-201ENST00000515933 244 ntBASIC3.51□□□□□ -1.85
C9orf72Q96LT7 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.51□□□□□ -1.85
C9orf72Q96LT7 AC012414.2-201ENST00000559474 187 ntBASIC3.51□□□□□ -1.85
C9orf72Q96LT7 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.51□□□□□ -1.85
C9orf72Q96LT7 SRGNP1-201ENST00000603392 451 ntBASIC3.51□□□□□ -1.85
C9orf72Q96LT7 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC3.51□□□□□ -1.85
C9orf72Q96LT7 U6.105-201ENST00000637379 88 ntBASIC3.51□□□□□ -1.85
C9orf72Q96LT7 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.51□□□□□ -1.85
C9orf72Q96LT7 AC090337.1-201ENST00000579651 2074 ntBASIC3.51□□□□□ -1.85
C9orf72Q96LT7 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
C9orf72Q96LT7 AC004972.1-201ENST00000623934 2209 ntBASIC3.51□□□□□ -1.85
C9orf72Q96LT7 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
C9orf72Q96LT7 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.51□□□□□ -1.85
C9orf72Q96LT7 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
C9orf72Q96LT7 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
C9orf72Q96LT7 MTCO1P12-201ENST00000414273 1543 ntBASIC3.5□□□□□ -1.85
C9orf72Q96LT7 HSPA8P19-201ENST00000505359 1517 ntBASIC3.5□□□□□ -1.85
C9orf72Q96LT7 AC032011.1-201ENST00000611703 1549 ntBASIC3.5□□□□□ -1.85
C9orf72Q96LT7 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
C9orf72Q96LT7 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
C9orf72Q96LT7 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
C9orf72Q96LT7 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.5□□□□□ -1.85
C9orf72Q96LT7 RNU6-40P-201ENST00000384254 107 ntBASIC3.5□□□□□ -1.85
C9orf72Q96LT7 MIR34B-201ENST00000385076 84 ntBASIC3.5□□□□□ -1.85
C9orf72Q96LT7 HMGB1P13-201ENST00000406019 642 ntBASIC3.5□□□□□ -1.85
C9orf72Q96LT7 RNU2-6P-201ENST00000411404 190 ntBASIC3.5□□□□□ -1.85
C9orf72Q96LT7 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.5□□□□□ -1.85
C9orf72Q96LT7 RPS15AP6-201ENST00000420703 385 ntBASIC3.5□□□□□ -1.85
C9orf72Q96LT7 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.5□□□□□ -1.85
C9orf72Q96LT7 AC073063.1-201ENST00000434352 607 ntBASIC3.5□□□□□ -1.85
C9orf72Q96LT7 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.5□□□□□ -1.85
C9orf72Q96LT7 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.5□□□□□ -1.85
C9orf72Q96LT7 AC092641.1-201ENST00000440229 772 ntBASIC3.5□□□□□ -1.85
C9orf72Q96LT7 AC097262.1-201ENST00000452559 548 ntBASIC3.5□□□□□ -1.85
C9orf72Q96LT7 HGF-207ENST00000453018 721 ntTSL 3 BASIC3.5□□□□□ -1.85
C9orf72Q96LT7 SNORA31.13-201ENST00000516624 135 ntBASIC3.5□□□□□ -1.85
C9orf72Q96LT7 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.5□□□□□ -1.85
C9orf72Q96LT7 COX6B1P6-201ENST00000522347 255 ntBASIC3.5□□□□□ -1.85
C9orf72Q96LT7 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC3.5□□□□□ -1.85
C9orf72Q96LT7 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
C9orf72Q96LT7 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.5□□□□□ -1.85
C9orf72Q96LT7 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.5□□□□□ -1.85
C9orf72Q96LT7 AC004024.1-201ENST00000549244 247 ntBASIC3.5□□□□□ -1.85
C9orf72Q96LT7 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.5□□□□□ -1.85
C9orf72Q96LT7 AL389895.1-201ENST00000554127 252 ntBASIC3.5□□□□□ -1.85
C9orf72Q96LT7 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.5□□□□□ -1.85
C9orf72Q96LT7 CBX3P2-202ENST00000583365 535 ntBASIC3.5□□□□□ -1.85
C9orf72Q96LT7 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
C9orf72Q96LT7 MIR8058-201ENST00000615737 89 ntBASIC3.5□□□□□ -1.85
C9orf72Q96LT7 MIR6864-201ENST00000617935 70 ntBASIC3.5□□□□□ -1.85
C9orf72Q96LT7 XIST_intron.1-201ENST00000619444 68 ntBASIC3.5□□□□□ -1.85
C9orf72Q96LT7 AL392088.2-201ENST00000637607 285 ntBASIC3.5□□□□□ -1.85
C9orf72Q96LT7 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms