Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 RNU6-450P-201ENST00000364654 107 ntBASIC6.8□□□□□ -1.32
TRIM47Q96LD4 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
TRIM47Q96LD4 RNU6-713P-201ENST00000384761 107 ntBASIC6.8□□□□□ -1.32
TRIM47Q96LD4 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
TRIM47Q96LD4 RNU2-38P-201ENST00000410856 79 ntBASIC6.8□□□□□ -1.32
TRIM47Q96LD4 Y_RNA.646-201ENST00000410980 101 ntBASIC6.8□□□□□ -1.32
TRIM47Q96LD4 RPL37P18-201ENST00000411602 243 ntBASIC6.8□□□□□ -1.32
TRIM47Q96LD4 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.8□□□□□ -1.32
TRIM47Q96LD4 RGS17P1-201ENST00000423358 553 ntBASIC6.8□□□□□ -1.32
TRIM47Q96LD4 RSL24D1P6-201ENST00000426934 401 ntBASIC6.8□□□□□ -1.32
TRIM47Q96LD4 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC6.8□□□□□ -1.32
TRIM47Q96LD4 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC6.8□□□□□ -1.32
TRIM47Q96LD4 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC6.8□□□□□ -1.32
TRIM47Q96LD4 HMGB1P15-201ENST00000453854 435 ntBASIC6.8□□□□□ -1.32
TRIM47Q96LD4 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC6.8□□□□□ -1.32
TRIM47Q96LD4 RPS17P15-201ENST00000475609 349 ntBASIC6.8□□□□□ -1.32
TRIM47Q96LD4 Y_RNA.700-201ENST00000516806 100 ntBASIC6.8□□□□□ -1.32
TRIM47Q96LD4 RNU6-1213P-201ENST00000517075 94 ntBASIC6.8□□□□□ -1.32
TRIM47Q96LD4 AC012400.1-201ENST00000518452 381 ntBASIC6.8□□□□□ -1.32
TRIM47Q96LD4 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
TRIM47Q96LD4 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC6.8□□□□□ -1.32
TRIM47Q96LD4 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC6.8□□□□□ -1.32
TRIM47Q96LD4 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC6.8□□□□□ -1.32
TRIM47Q96LD4 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC6.8□□□□□ -1.32
TRIM47Q96LD4 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.8□□□□□ -1.32
TRIM47Q96LD4 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC6.8□□□□□ -1.32
TRIM47Q96LD4 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC6.8□□□□□ -1.32
TRIM47Q96LD4 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC6.8□□□□□ -1.32
TRIM47Q96LD4 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC6.8□□□□□ -1.32
TRIM47Q96LD4 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
TRIM47Q96LD4 RPSAP73-201ENST00000614820 330 ntBASIC6.8□□□□□ -1.32
TRIM47Q96LD4 PLCE1P1-201ENST00000622094 305 ntBASIC6.8□□□□□ -1.32
TRIM47Q96LD4 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC6.8□□□□□ -1.32
TRIM47Q96LD4 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.8□□□□□ -1.32
TRIM47Q96LD4 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC6.8□□□□□ -1.32
TRIM47Q96LD4 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.8□□□□□ -1.32
TRIM47Q96LD4 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.8□□□□□ -1.32
TRIM47Q96LD4 AC233263.6-201ENST00000631132 1963 ntBASIC6.8□□□□□ -1.32
TRIM47Q96LD4 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
TRIM47Q96LD4 VPS35P1-201ENST00000563400 1518 ntBASIC6.8□□□□□ -1.32
TRIM47Q96LD4 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC6.8□□□□□ -1.32
TRIM47Q96LD4 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
TRIM47Q96LD4 AC005592.1-201ENST00000566527 1640 ntBASIC6.79□□□□□ -1.32
TRIM47Q96LD4 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.79□□□□□ -1.32
TRIM47Q96LD4 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
TRIM47Q96LD4 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
TRIM47Q96LD4 OFD1P17-201ENST00000437639 3018 ntBASIC6.79□□□□□ -1.32
TRIM47Q96LD4 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
TRIM47Q96LD4 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
TRIM47Q96LD4 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
TRIM47Q96LD4 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.79□□□□□ -1.32
TRIM47Q96LD4 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
TRIM47Q96LD4 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
TRIM47Q96LD4 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC6.79□□□□□ -1.32
TRIM47Q96LD4 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
TRIM47Q96LD4 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.79□□□□□ -1.32
TRIM47Q96LD4 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
TRIM47Q96LD4 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
TRIM47Q96LD4 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.79□□□□□ -1.32
TRIM47Q96LD4 RNU5E-1-201ENST00000362477 120 ntBASIC6.79□□□□□ -1.32
TRIM47Q96LD4 RNU6-886P-201ENST00000384319 105 ntBASIC6.79□□□□□ -1.32
TRIM47Q96LD4 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
TRIM47Q96LD4 RNU6-954P-201ENST00000411355 107 ntBASIC6.79□□□□□ -1.32
TRIM47Q96LD4 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC6.79□□□□□ -1.32
TRIM47Q96LD4 EEF1A1P29-201ENST00000416082 1096 ntBASIC6.79□□□□□ -1.32
TRIM47Q96LD4 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC6.79□□□□□ -1.32
TRIM47Q96LD4 AL731534.1-201ENST00000434711 269 ntBASIC6.79□□□□□ -1.32
TRIM47Q96LD4 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC6.79□□□□□ -1.32
TRIM47Q96LD4 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC6.79□□□□□ -1.32
TRIM47Q96LD4 AF228730.2-201ENST00000438784 848 ntBASIC6.79□□□□□ -1.32
TRIM47Q96LD4 HMGB3P11-201ENST00000440127 604 ntBASIC6.79□□□□□ -1.32
TRIM47Q96LD4 RPS7P3-201ENST00000443360 580 ntBASIC6.79□□□□□ -1.32
TRIM47Q96LD4 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC6.79□□□□□ -1.32
TRIM47Q96LD4 RNU7-157P-201ENST00000459600 66 ntBASIC6.79□□□□□ -1.32
TRIM47Q96LD4 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC6.79□□□□□ -1.32
TRIM47Q96LD4 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.79□□□□□ -1.32
TRIM47Q96LD4 LIAS-206ENST00000513731 826 ntTSL 5 BASIC6.79□□□□□ -1.32
TRIM47Q96LD4 RNU6-1261P-201ENST00000517194 104 ntBASIC6.79□□□□□ -1.32
TRIM47Q96LD4 OR4R1P-201ENST00000529879 463 ntBASIC6.79□□□□□ -1.32
TRIM47Q96LD4 HIGD1AP5-201ENST00000529959 259 ntBASIC6.79□□□□□ -1.32
TRIM47Q96LD4 HMGB1P42-201ENST00000532126 553 ntBASIC6.79□□□□□ -1.32
TRIM47Q96LD4 MIR4790-201ENST00000577799 79 ntBASIC6.79□□□□□ -1.32
TRIM47Q96LD4 AC125232.2-201ENST00000592457 143 ntBASIC6.79□□□□□ -1.32
TRIM47Q96LD4 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC6.79□□□□□ -1.32
TRIM47Q96LD4 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.79□□□□□ -1.32
TRIM47Q96LD4 AC012409.4-201ENST00000612923 249 ntBASIC6.79□□□□□ -1.32
TRIM47Q96LD4 AC130324.3-201ENST00000614165 542 ntBASIC6.79□□□□□ -1.32
TRIM47Q96LD4 MIR6837-201ENST00000620884 64 ntBASIC6.79□□□□□ -1.32
TRIM47Q96LD4 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC6.79□□□□□ -1.32
TRIM47Q96LD4 PACRG-211ENST00000621363 360 ntTSL 5 BASIC6.79□□□□□ -1.32
TRIM47Q96LD4 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC6.79□□□□□ -1.32
TRIM47Q96LD4 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
TRIM47Q96LD4 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
TRIM47Q96LD4 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
TRIM47Q96LD4 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
TRIM47Q96LD4 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
TRIM47Q96LD4 AC025470.1-201ENST00000510053 2032 ntBASIC6.79□□□□□ -1.32
TRIM47Q96LD4 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
TRIM47Q96LD4 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
TRIM47Q96LD4 OSBPL9P1-201ENST00000604744 1469 ntBASIC6.79□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms