Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
PTP4A1Q93096 RNU6-328P-201ENST00000390887 106 ntBASIC3.78□□□□□ -1.8
PTP4A1Q93096 RNU6-298P-201ENST00000390888 96 ntBASIC3.78□□□□□ -1.8
PTP4A1Q93096 PTMAP5-201ENST00000393073 333 ntBASIC3.78□□□□□ -1.8
PTP4A1Q93096 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.78□□□□□ -1.8
PTP4A1Q93096 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.78□□□□□ -1.8
PTP4A1Q93096 AL159169.1-201ENST00000421119 127 ntBASIC3.78□□□□□ -1.8
PTP4A1Q93096 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC3.78□□□□□ -1.8
PTP4A1Q93096 AC093155.1-201ENST00000440164 826 ntBASIC3.78□□□□□ -1.8
PTP4A1Q93096 ATP6V0E1P2-201ENST00000441771 245 ntBASIC3.78□□□□□ -1.8
PTP4A1Q93096 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.78□□□□□ -1.8
PTP4A1Q93096 VN1R10P-201ENST00000447106 875 ntBASIC3.78□□□□□ -1.8
PTP4A1Q93096 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC3.78□□□□□ -1.8
PTP4A1Q93096 RPS29P33-201ENST00000456717 146 ntBASIC3.78□□□□□ -1.8
PTP4A1Q93096 RN7SL810P-201ENST00000493031 276 ntBASIC3.78□□□□□ -1.8
PTP4A1Q93096 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PTP4A1Q93096 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.78□□□□□ -1.8
PTP4A1Q93096 AC006390.1-201ENST00000508068 283 ntBASIC3.78□□□□□ -1.8
PTP4A1Q93096 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.78□□□□□ -1.8
PTP4A1Q93096 RNU1-61P-201ENST00000516107 151 ntBASIC3.78□□□□□ -1.8
PTP4A1Q93096 RNU6-1261P-201ENST00000517194 104 ntBASIC3.78□□□□□ -1.8
PTP4A1Q93096 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.78□□□□□ -1.8
PTP4A1Q93096 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC3.78□□□□□ -1.8
PTP4A1Q93096 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.78□□□□□ -1.8
PTP4A1Q93096 AC018630.1-201ENST00000541376 925 ntBASIC3.78□□□□□ -1.8
PTP4A1Q93096 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.78□□□□□ -1.8
PTP4A1Q93096 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC3.78□□□□□ -1.8
PTP4A1Q93096 AC063950.1-201ENST00000552036 308 ntBASIC3.78□□□□□ -1.8
PTP4A1Q93096 GTF2IP8-201ENST00000560687 584 ntBASIC3.78□□□□□ -1.8
PTP4A1Q93096 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.78□□□□□ -1.8
PTP4A1Q93096 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC3.78□□□□□ -1.8
PTP4A1Q93096 KPNA2P3-201ENST00000584190 848 ntBASIC3.78□□□□□ -1.8
PTP4A1Q93096 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.78□□□□□ -1.8
PTP4A1Q93096 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.78□□□□□ -1.8
PTP4A1Q93096 BNIP3P24-201ENST00000593398 557 ntBASIC3.78□□□□□ -1.8
PTP4A1Q93096 AC011468.4-201ENST00000603942 409 ntBASIC3.78□□□□□ -1.8
PTP4A1Q93096 AL451086.1-201ENST00000605596 223 ntBASIC3.78□□□□□ -1.8
PTP4A1Q93096 AC090948.1-201ENST00000607464 549 ntBASIC3.78□□□□□ -1.8
PTP4A1Q93096 U7.8-201ENST00000619968 63 ntBASIC3.78□□□□□ -1.8
PTP4A1Q93096 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.78□□□□□ -1.8
PTP4A1Q93096 AL590240.3-201ENST00000621416 943 ntBASIC3.78□□□□□ -1.8
PTP4A1Q93096 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.78□□□□□ -1.8
PTP4A1Q93096 AC010872.1-201ENST00000624225 675 ntBASIC3.78□□□□□ -1.8
PTP4A1Q93096 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PTP4A1Q93096 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PTP4A1Q93096 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
PTP4A1Q93096 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.78□□□□□ -1.8
PTP4A1Q93096 AF117829.1-206ENST00000621883 3802 ntBASIC3.78□□□□□ -1.8
PTP4A1Q93096 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
PTP4A1Q93096 TANK-205ENST00000405852 2155 ntTSL 5 BASIC3.78□□□□□ -1.81
PTP4A1Q93096 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
PTP4A1Q93096 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PTP4A1Q93096 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PTP4A1Q93096 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PTP4A1Q93096 RPS4XP5-202ENST00000449995 1334 ntBASIC3.77□□□□□ -1.81
PTP4A1Q93096 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
PTP4A1Q93096 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
PTP4A1Q93096 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PTP4A1Q93096 FAM3C2-201ENST00000312214 681 ntBASIC3.77□□□□□ -1.81
PTP4A1Q93096 SNORD65.1-201ENST00000390889 71 ntBASIC3.77□□□□□ -1.81
PTP4A1Q93096 AC016769.3-201ENST00000396562 315 ntBASIC3.77□□□□□ -1.81
PTP4A1Q93096 RPL23AP47-201ENST00000408017 460 ntBASIC3.77□□□□□ -1.81
PTP4A1Q93096 RPL26P29-201ENST00000415623 438 ntBASIC3.77□□□□□ -1.81
PTP4A1Q93096 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC3.77□□□□□ -1.81
PTP4A1Q93096 DNAJC19P7-201ENST00000428811 344 ntBASIC3.77□□□□□ -1.81
PTP4A1Q93096 RPL23AP74-201ENST00000437246 471 ntBASIC3.77□□□□□ -1.81
PTP4A1Q93096 RPL23AP52-201ENST00000439311 478 ntBASIC3.77□□□□□ -1.81
PTP4A1Q93096 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.77□□□□□ -1.81
PTP4A1Q93096 MTCYBP11-201ENST00000447254 1109 ntBASIC3.77□□□□□ -1.81
PTP4A1Q93096 AC079776.3-201ENST00000450665 370 ntBASIC3.77□□□□□ -1.81
PTP4A1Q93096 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC3.77□□□□□ -1.81
PTP4A1Q93096 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.77□□□□□ -1.81
PTP4A1Q93096 RAD23BP3-201ENST00000454157 1152 ntBASIC3.77□□□□□ -1.81
PTP4A1Q93096 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.77□□□□□ -1.81
PTP4A1Q93096 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC3.77□□□□□ -1.81
PTP4A1Q93096 AC092757.1-201ENST00000467293 467 ntBASIC3.77□□□□□ -1.81
PTP4A1Q93096 AC087312.1-201ENST00000471411 480 ntBASIC3.77□□□□□ -1.81
PTP4A1Q93096 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC3.77□□□□□ -1.81
PTP4A1Q93096 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC3.77□□□□□ -1.81
PTP4A1Q93096 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.77□□□□□ -1.81
PTP4A1Q93096 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC3.77□□□□□ -1.81
PTP4A1Q93096 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PTP4A1Q93096 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.77□□□□□ -1.81
PTP4A1Q93096 AL139174.1-201ENST00000531489 886 ntBASIC3.77□□□□□ -1.81
PTP4A1Q93096 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.77□□□□□ -1.81
PTP4A1Q93096 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.77□□□□□ -1.81
PTP4A1Q93096 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC3.77□□□□□ -1.81
PTP4A1Q93096 MIR3912-201ENST00000577566 105 ntBASIC3.77□□□□□ -1.81
PTP4A1Q93096 MIR4330-201ENST00000579077 105 ntBASIC3.77□□□□□ -1.81
PTP4A1Q93096 AC113403.1-201ENST00000604910 193 ntBASIC3.77□□□□□ -1.81
PTP4A1Q93096 AC069545.1-201ENST00000605671 358 ntBASIC3.77□□□□□ -1.81
PTP4A1Q93096 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.77□□□□□ -1.81
PTP4A1Q93096 MIR6820-201ENST00000611508 62 ntBASIC3.77□□□□□ -1.81
PTP4A1Q93096 AL391261.4-201ENST00000616012 481 ntBASIC3.77□□□□□ -1.81
PTP4A1Q93096 MKKS-204ENST00000639674 192 ntBASIC3.77□□□□□ -1.81
PTP4A1Q93096 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PTP4A1Q93096 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.77□□□□□ -1.81
PTP4A1Q93096 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PTP4A1Q93096 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PTP4A1Q93096 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms