Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 AL590609.2-201ENST00000421430 368 ntBASIC5.35□□□□□ -1.55
ERCC4Q92889 RPS27AP14-201ENST00000422868 454 ntBASIC5.35□□□□□ -1.55
ERCC4Q92889 OR2B7P-201ENST00000429302 934 ntBASIC5.35□□□□□ -1.55
ERCC4Q92889 CEACAMP7-201ENST00000444105 496 ntBASIC5.35□□□□□ -1.55
ERCC4Q92889 Z80107.2-201ENST00000445127 392 ntBASIC5.35□□□□□ -1.55
ERCC4Q92889 AC239367.2-201ENST00000447309 705 ntBASIC5.35□□□□□ -1.55
ERCC4Q92889 NANOGNBP1-201ENST00000448444 480 ntBASIC5.35□□□□□ -1.55
ERCC4Q92889 snoU13.20-201ENST00000459180 104 ntBASIC5.35□□□□□ -1.55
ERCC4Q92889 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.35□□□□□ -1.55
ERCC4Q92889 RPL7AP28-201ENST00000464513 571 ntBASIC5.35□□□□□ -1.55
ERCC4Q92889 RN7SL329P-201ENST00000467740 299 ntBASIC5.35□□□□□ -1.55
ERCC4Q92889 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
ERCC4Q92889 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC5.35□□□□□ -1.55
ERCC4Q92889 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
ERCC4Q92889 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC5.35□□□□□ -1.55
ERCC4Q92889 AC109462.1-201ENST00000491087 368 ntBASIC5.35□□□□□ -1.55
ERCC4Q92889 AC023424.2-201ENST00000493479 777 ntBASIC5.35□□□□□ -1.55
ERCC4Q92889 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC5.35□□□□□ -1.55
ERCC4Q92889 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC5.35□□□□□ -1.55
ERCC4Q92889 RN7SKP147-201ENST00000517154 244 ntBASIC5.35□□□□□ -1.55
ERCC4Q92889 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC5.35□□□□□ -1.55
ERCC4Q92889 AP000790.1-201ENST00000528891 737 ntBASIC5.35□□□□□ -1.55
ERCC4Q92889 OR4A45P-201ENST00000529954 901 ntBASIC5.35□□□□□ -1.55
ERCC4Q92889 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC5.35□□□□□ -1.55
ERCC4Q92889 AL389895.1-201ENST00000554127 252 ntBASIC5.35□□□□□ -1.55
ERCC4Q92889 AC079075.1-201ENST00000559543 878 ntBASIC5.35□□□□□ -1.55
ERCC4Q92889 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC5.35□□□□□ -1.55
ERCC4Q92889 RN7SL176P-201ENST00000580352 264 ntBASIC5.35□□□□□ -1.55
ERCC4Q92889 AC209154.1-201ENST00000582156 337 ntBASIC5.35□□□□□ -1.55
ERCC4Q92889 AC017100.2-201ENST00000584628 355 ntBASIC5.35□□□□□ -1.55
ERCC4Q92889 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC5.35□□□□□ -1.55
ERCC4Q92889 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC5.35□□□□□ -1.55
ERCC4Q92889 AC008687.2-201ENST00000597865 520 ntBASIC5.35□□□□□ -1.55
ERCC4Q92889 AC020910.3-201ENST00000603701 874 ntBASIC5.35□□□□□ -1.55
ERCC4Q92889 AC115286.1-201ENST00000604298 434 ntBASIC5.35□□□□□ -1.55
ERCC4Q92889 AC067959.1-201ENST00000604334 379 ntBASIC5.35□□□□□ -1.55
ERCC4Q92889 AL121932.1-201ENST00000605542 214 ntBASIC5.35□□□□□ -1.55
ERCC4Q92889 AC007497.1-201ENST00000610421 561 ntBASIC5.35□□□□□ -1.55
ERCC4Q92889 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC5.35□□□□□ -1.55
ERCC4Q92889 SEPT14P19-203ENST00000633205 211 ntBASIC5.35□□□□□ -1.55
ERCC4Q92889 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
ERCC4Q92889 DHX9P1-201ENST00000436565 3076 ntBASIC5.35□□□□□ -1.55
ERCC4Q92889 AL445437.1-201ENST00000623157 3087 ntBASIC5.35□□□□□ -1.55
ERCC4Q92889 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.35□□□□□ -1.55
ERCC4Q92889 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.35□□□□□ -1.55
ERCC4Q92889 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
ERCC4Q92889 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
ERCC4Q92889 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
ERCC4Q92889 MTCO1P14-201ENST00000441695 1559 ntBASIC5.34□□□□□ -1.55
ERCC4Q92889 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
ERCC4Q92889 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
ERCC4Q92889 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
ERCC4Q92889 EEF1A1P42-201ENST00000613436 1331 ntBASIC5.34□□□□□ -1.55
ERCC4Q92889 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
ERCC4Q92889 RNU1-94P-201ENST00000362627 173 ntBASIC5.34□□□□□ -1.55
ERCC4Q92889 RN7SKP95-201ENST00000362860 303 ntBASIC5.34□□□□□ -1.55
ERCC4Q92889 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
ERCC4Q92889 MTCYBP36-201ENST00000404146 440 ntBASIC5.34□□□□□ -1.55
ERCC4Q92889 AL139128.1-201ENST00000413921 941 ntBASIC5.34□□□□□ -1.55
ERCC4Q92889 AC009237.10-201ENST00000414112 510 ntBASIC5.34□□□□□ -1.55
ERCC4Q92889 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.34□□□□□ -1.55
ERCC4Q92889 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.34□□□□□ -1.55
ERCC4Q92889 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC5.34□□□□□ -1.55
ERCC4Q92889 B3GALNT1P1-201ENST00000420569 975 ntBASIC5.34□□□□□ -1.55
ERCC4Q92889 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC5.34□□□□□ -1.55
ERCC4Q92889 VDAC1P6-201ENST00000430062 855 ntBASIC5.34□□□□□ -1.55
ERCC4Q92889 ZYG11AP1-201ENST00000430329 837 ntBASIC5.34□□□□□ -1.55
ERCC4Q92889 NEK4P1-201ENST00000433383 879 ntBASIC5.34□□□□□ -1.55
ERCC4Q92889 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.34□□□□□ -1.55
ERCC4Q92889 UBE2V1P8-201ENST00000437166 265 ntBASIC5.34□□□□□ -1.55
ERCC4Q92889 PRPF38AP2-201ENST00000438179 851 ntBASIC5.34□□□□□ -1.55
ERCC4Q92889 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC5.34□□□□□ -1.55
ERCC4Q92889 AL831737.1-201ENST00000441288 271 ntBASIC5.34□□□□□ -1.55
ERCC4Q92889 SNRPFP4-201ENST00000456366 242 ntBASIC5.34□□□□□ -1.55
ERCC4Q92889 CREM-230ENST00000474931 626 ntTSL 2 BASIC5.34□□□□□ -1.55
ERCC4Q92889 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC5.34□□□□□ -1.55
ERCC4Q92889 KRT19P6-201ENST00000510983 209 ntBASIC5.34□□□□□ -1.55
ERCC4Q92889 AC021146.3-201ENST00000511911 260 ntBASIC5.34□□□□□ -1.55
ERCC4Q92889 RNA5SP228-201ENST00000516232 133 ntBASIC5.34□□□□□ -1.55
ERCC4Q92889 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.34□□□□□ -1.55
ERCC4Q92889 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC5.34□□□□□ -1.55
ERCC4Q92889 NTS-203ENST00000551529 801 ntTSL 3 BASIC5.34□□□□□ -1.55
ERCC4Q92889 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC5.34□□□□□ -1.55
ERCC4Q92889 ZNF519P2-201ENST00000557032 169 ntBASIC5.34□□□□□ -1.55
ERCC4Q92889 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC5.34□□□□□ -1.55
ERCC4Q92889 AC015912.2-201ENST00000571053 181 ntBASIC5.34□□□□□ -1.55
ERCC4Q92889 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.34□□□□□ -1.55
ERCC4Q92889 ELOCP28-201ENST00000590044 317 ntBASIC5.34□□□□□ -1.55
ERCC4Q92889 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC5.34□□□□□ -1.55
ERCC4Q92889 SEPT7P9-203ENST00000604116 343 ntBASIC5.34□□□□□ -1.55
ERCC4Q92889 AC010200.2-201ENST00000605098 235 ntBASIC5.34□□□□□ -1.55
ERCC4Q92889 AL109618.2-201ENST00000605527 211 ntBASIC5.34□□□□□ -1.55
ERCC4Q92889 AC090517.2-201ENST00000614966 680 ntBASIC5.34□□□□□ -1.55
ERCC4Q92889 AC068870.2-201ENST00000620635 389 ntBASIC5.34□□□□□ -1.55
ERCC4Q92889 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC5.34□□□□□ -1.55
ERCC4Q92889 AC244258.1-201ENST00000637553 1071 ntBASIC5.34□□□□□ -1.55
ERCC4Q92889 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
ERCC4Q92889 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.33□□□□□ -1.56
ERCC4Q92889 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
ERCC4Q92889 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 130.2 ms