Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC3.18□□□□□ -1.9
SHROOM3Q8TF72 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC3.18□□□□□ -1.9
SHROOM3Q8TF72 AC068657.1-201ENST00000520807 306 ntBASIC3.18□□□□□ -1.9
SHROOM3Q8TF72 AL109741.3-201ENST00000561748 592 ntBASIC3.18□□□□□ -1.9
SHROOM3Q8TF72 AC005242.1-201ENST00000585658 438 ntBASIC3.18□□□□□ -1.9
SHROOM3Q8TF72 BMS1P7-201ENST00000602440 1052 ntBASIC3.18□□□□□ -1.9
SHROOM3Q8TF72 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC3.18□□□□□ -1.9
SHROOM3Q8TF72 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.18□□□□□ -1.9
SHROOM3Q8TF72 AL645568.2-201ENST00000432815 1337 ntBASIC3.17□□□□□ -1.9
SHROOM3Q8TF72 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.17□□□□□ -1.9
SHROOM3Q8TF72 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SHROOM3Q8TF72 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.17□□□□□ -1.9
SHROOM3Q8TF72 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
SHROOM3Q8TF72 SNORA44-201ENST00000384584 132 ntBASIC3.17□□□□□ -1.9
SHROOM3Q8TF72 SNORA46-201ENST00000384762 135 ntBASIC3.17□□□□□ -1.9
SHROOM3Q8TF72 SNORA79B-201ENST00000410557 148 ntBASIC3.17□□□□□ -1.9
SHROOM3Q8TF72 RN7SKP222-201ENST00000410651 315 ntBASIC3.17□□□□□ -1.9
SHROOM3Q8TF72 AL353678.1-201ENST00000422735 741 ntBASIC3.17□□□□□ -1.9
SHROOM3Q8TF72 AC108734.1-201ENST00000439549 399 ntBASIC3.17□□□□□ -1.9
SHROOM3Q8TF72 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.17□□□□□ -1.9
SHROOM3Q8TF72 HMGB3P6-201ENST00000444896 598 ntBASIC3.17□□□□□ -1.9
SHROOM3Q8TF72 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC3.17□□□□□ -1.9
SHROOM3Q8TF72 AC021146.5-201ENST00000503544 545 ntBASIC3.17□□□□□ -1.9
SHROOM3Q8TF72 SNORA48.9-201ENST00000516419 162 ntBASIC3.17□□□□□ -1.9
SHROOM3Q8TF72 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.17□□□□□ -1.9
SHROOM3Q8TF72 AC022080.3-201ENST00000544433 482 ntBASIC3.17□□□□□ -1.9
SHROOM3Q8TF72 MTND2P17-201ENST00000550281 688 ntBASIC3.17□□□□□ -1.9
SHROOM3Q8TF72 AC090953.1-201ENST00000604305 1092 ntBASIC3.17□□□□□ -1.9
SHROOM3Q8TF72 AC079791.1-201ENST00000605356 973 ntBASIC3.17□□□□□ -1.9
SHROOM3Q8TF72 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC3.17□□□□□ -1.9
SHROOM3Q8TF72 AL137790.1-201ENST00000634283 177 ntBASIC3.17□□□□□ -1.9
SHROOM3Q8TF72 IGHVIII-44-202ENST00000636235 289 ntBASIC3.17□□□□□ -1.9
SHROOM3Q8TF72 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
SHROOM3Q8TF72 AL049555.1-201ENST00000562834 1933 ntBASIC3.16□□□□□ -1.9
SHROOM3Q8TF72 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SHROOM3Q8TF72 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SHROOM3Q8TF72 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SHROOM3Q8TF72 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC3.16□□□□□ -1.9
SHROOM3Q8TF72 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SHROOM3Q8TF72 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC3.16□□□□□ -1.9
SHROOM3Q8TF72 AC112492.1-201ENST00000449607 712 ntBASIC3.16□□□□□ -1.9
SHROOM3Q8TF72 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC3.16□□□□□ -1.9
SHROOM3Q8TF72 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.16□□□□□ -1.9
SHROOM3Q8TF72 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.16□□□□□ -1.9
SHROOM3Q8TF72 AC091826.1-201ENST00000514065 313 ntBASIC3.16□□□□□ -1.9
SHROOM3Q8TF72 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.16□□□□□ -1.9
SHROOM3Q8TF72 AC022784.5-201ENST00000522241 437 ntBASIC3.16□□□□□ -1.9
SHROOM3Q8TF72 KCTD9P6-201ENST00000522306 950 ntBASIC3.16□□□□□ -1.9
SHROOM3Q8TF72 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.16□□□□□ -1.9
SHROOM3Q8TF72 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.16□□□□□ -1.9
SHROOM3Q8TF72 AC103881.1-201ENST00000603476 538 ntBASIC3.16□□□□□ -1.9
SHROOM3Q8TF72 AC009948.4-201ENST00000604692 675 ntBASIC3.16□□□□□ -1.9
SHROOM3Q8TF72 TUG1_1.1-201ENST00000610654 145 ntBASIC3.16□□□□□ -1.9
SHROOM3Q8TF72 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SHROOM3Q8TF72 RMST-202ENST00000541282 2099 ntTSL 2 BASIC3.16□□□□□ -1.9
SHROOM3Q8TF72 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SHROOM3Q8TF72 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
SHROOM3Q8TF72 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SHROOM3Q8TF72 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
SHROOM3Q8TF72 MTCO1P8-201ENST00000416914 1523 ntBASIC3.16□□□□□ -1.9
SHROOM3Q8TF72 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.16□□□□□ -1.9
SHROOM3Q8TF72 OR5H2-201ENST00000355273 945 ntBASIC3.16□□□□□ -1.9
SHROOM3Q8TF72 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
SHROOM3Q8TF72 RNU6-805P-201ENST00000365643 106 ntBASIC3.16□□□□□ -1.9
SHROOM3Q8TF72 AC006960.1-201ENST00000419980 153 ntBASIC3.16□□□□□ -1.9
SHROOM3Q8TF72 AC107083.1-201ENST00000439643 279 ntBASIC3.16□□□□□ -1.9
SHROOM3Q8TF72 RNU7-157P-201ENST00000459600 66 ntBASIC3.16□□□□□ -1.9
SHROOM3Q8TF72 RPL7P48-201ENST00000461513 746 ntBASIC3.16□□□□□ -1.9
SHROOM3Q8TF72 TRBV8-1-201ENST00000481590 279 ntBASIC3.16□□□□□ -1.9
SHROOM3Q8TF72 PRELID3BP7-201ENST00000503606 469 ntBASIC3.16□□□□□ -1.9
SHROOM3Q8TF72 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
SHROOM3Q8TF72 RNU6-237P-201ENST00000515985 71 ntBASIC3.16□□□□□ -1.9
SHROOM3Q8TF72 AC025857.1-201ENST00000525252 377 ntBASIC3.16□□□□□ -1.9
SHROOM3Q8TF72 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.16□□□□□ -1.9
SHROOM3Q8TF72 AC011492.1-201ENST00000600023 315 ntBASIC3.16□□□□□ -1.9
SHROOM3Q8TF72 AC117490.2-201ENST00000610042 594 ntBASIC3.16□□□□□ -1.9
SHROOM3Q8TF72 AC091903.1-201ENST00000624322 454 ntBASIC3.16□□□□□ -1.9
SHROOM3Q8TF72 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC3.16□□□□□ -1.9
SHROOM3Q8TF72 AL136360.1-201ENST00000503377 1900 ntBASIC3.16□□□□□ -1.9
SHROOM3Q8TF72 OR56A5-201ENST00000340110 738 ntBASIC3.15□□□□□ -1.91
SHROOM3Q8TF72 RNA5SP383-201ENST00000362934 120 ntBASIC3.15□□□□□ -1.91
SHROOM3Q8TF72 NUP35P1-201ENST00000422734 947 ntBASIC3.15□□□□□ -1.91
SHROOM3Q8TF72 B3GNT2P1-201ENST00000434960 952 ntBASIC3.15□□□□□ -1.91
SHROOM3Q8TF72 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.15□□□□□ -1.91
SHROOM3Q8TF72 RPS20P32-201ENST00000456044 356 ntBASIC3.15□□□□□ -1.91
SHROOM3Q8TF72 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.15□□□□□ -1.91
SHROOM3Q8TF72 AP002884.2-201ENST00000471647 395 ntBASIC3.15□□□□□ -1.91
SHROOM3Q8TF72 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.15□□□□□ -1.91
SHROOM3Q8TF72 AC147055.1-201ENST00000509261 750 ntBASIC3.15□□□□□ -1.91
SHROOM3Q8TF72 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.15□□□□□ -1.91
SHROOM3Q8TF72 AL137072.1-201ENST00000603444 466 ntBASIC3.15□□□□□ -1.91
SHROOM3Q8TF72 RNU6-84P-201ENST00000607737 102 ntBASIC3.15□□□□□ -1.91
SHROOM3Q8TF72 AL118508.4-201ENST00000624142 1176 ntBASIC3.15□□□□□ -1.91
SHROOM3Q8TF72 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SHROOM3Q8TF72 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
SHROOM3Q8TF72 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.15□□□□□ -1.91
SHROOM3Q8TF72 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
SHROOM3Q8TF72 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.14□□□□□ -1.91
SHROOM3Q8TF72 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.14□□□□□ -1.91
SHROOM3Q8TF72 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 148.7 ms