Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 AL133393.1-201ENST00000603277 287 ntBASIC3.34□□□□□ -1.87
CLHC1Q8NHS4 AL590282.1-201ENST00000610379 1136 ntBASIC3.34□□□□□ -1.87
CLHC1Q8NHS4 AP003355.3-201ENST00000623465 114 ntBASIC3.34□□□□□ -1.87
CLHC1Q8NHS4 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC3.34□□□□□ -1.87
CLHC1Q8NHS4 AL513302.2-201ENST00000562313 1842 ntBASIC3.34□□□□□ -1.87
CLHC1Q8NHS4 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
CLHC1Q8NHS4 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.34□□□□□ -1.87
CLHC1Q8NHS4 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
CLHC1Q8NHS4 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.34□□□□□ -1.88
CLHC1Q8NHS4 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.34□□□□□ -1.88
CLHC1Q8NHS4 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
CLHC1Q8NHS4 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.34□□□□□ -1.88
CLHC1Q8NHS4 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.33□□□□□ -1.88
CLHC1Q8NHS4 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CLHC1Q8NHS4 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CLHC1Q8NHS4 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.33□□□□□ -1.88
CLHC1Q8NHS4 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.33□□□□□ -1.88
CLHC1Q8NHS4 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CLHC1Q8NHS4 DEFB109C-201ENST00000382575 264 ntBASIC3.33□□□□□ -1.88
CLHC1Q8NHS4 DEFB109B-201ENST00000382656 264 ntBASIC3.33□□□□□ -1.88
CLHC1Q8NHS4 MIR7-1-201ENST00000384871 110 ntBASIC3.33□□□□□ -1.88
CLHC1Q8NHS4 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
CLHC1Q8NHS4 AL121972.1-201ENST00000402023 252 ntBASIC3.33□□□□□ -1.88
CLHC1Q8NHS4 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CLHC1Q8NHS4 AL035423.1-201ENST00000420331 213 ntBASIC3.33□□□□□ -1.88
CLHC1Q8NHS4 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CLHC1Q8NHS4 DPPA2P1-201ENST00000428060 556 ntBASIC3.33□□□□□ -1.88
CLHC1Q8NHS4 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.33□□□□□ -1.88
CLHC1Q8NHS4 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC3.33□□□□□ -1.88
CLHC1Q8NHS4 HMGN2P13-201ENST00000476476 274 ntBASIC3.33□□□□□ -1.88
CLHC1Q8NHS4 AL024509.2-201ENST00000493462 493 ntBASIC3.33□□□□□ -1.88
CLHC1Q8NHS4 SETP14-201ENST00000497538 873 ntBASIC3.33□□□□□ -1.88
CLHC1Q8NHS4 SUMO1P1-201ENST00000497904 306 ntBASIC3.33□□□□□ -1.88
CLHC1Q8NHS4 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC3.33□□□□□ -1.88
CLHC1Q8NHS4 HMGN1P11-201ENST00000508668 303 ntBASIC3.33□□□□□ -1.88
CLHC1Q8NHS4 AC110768.1-201ENST00000509222 400 ntBASIC3.33□□□□□ -1.88
CLHC1Q8NHS4 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CLHC1Q8NHS4 RNU1-61P-201ENST00000516107 151 ntBASIC3.33□□□□□ -1.88
CLHC1Q8NHS4 MIR2276-201ENST00000516886 89 ntBASIC3.33□□□□□ -1.88
CLHC1Q8NHS4 RN7SKP96-201ENST00000516948 297 ntBASIC3.33□□□□□ -1.88
CLHC1Q8NHS4 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC3.33□□□□□ -1.88
CLHC1Q8NHS4 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.33□□□□□ -1.88
CLHC1Q8NHS4 AL139174.1-201ENST00000531489 886 ntBASIC3.33□□□□□ -1.88
CLHC1Q8NHS4 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.33□□□□□ -1.88
CLHC1Q8NHS4 AC011602.1-201ENST00000546484 331 ntBASIC3.33□□□□□ -1.88
CLHC1Q8NHS4 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CLHC1Q8NHS4 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC3.33□□□□□ -1.88
CLHC1Q8NHS4 GTF2IP22-201ENST00000554443 182 ntBASIC3.33□□□□□ -1.88
CLHC1Q8NHS4 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.33□□□□□ -1.88
CLHC1Q8NHS4 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.33□□□□□ -1.88
CLHC1Q8NHS4 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.33□□□□□ -1.88
CLHC1Q8NHS4 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC3.33□□□□□ -1.88
CLHC1Q8NHS4 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.33□□□□□ -1.88
CLHC1Q8NHS4 BNIP3P7-201ENST00000605641 516 ntBASIC3.33□□□□□ -1.88
CLHC1Q8NHS4 AL391497.1-201ENST00000608671 547 ntBASIC3.33□□□□□ -1.88
CLHC1Q8NHS4 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.33□□□□□ -1.88
CLHC1Q8NHS4 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.33□□□□□ -1.88
CLHC1Q8NHS4 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
CLHC1Q8NHS4 SRP72P2-201ENST00000344851 1979 ntBASIC3.32□□□□□ -1.88
CLHC1Q8NHS4 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CLHC1Q8NHS4 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
CLHC1Q8NHS4 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
CLHC1Q8NHS4 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CLHC1Q8NHS4 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CLHC1Q8NHS4 RNU6-50P-201ENST00000362356 103 ntBASIC3.32□□□□□ -1.88
CLHC1Q8NHS4 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CLHC1Q8NHS4 RNU1-101P-201ENST00000391171 127 ntBASIC3.32□□□□□ -1.88
CLHC1Q8NHS4 SNORA57.1-201ENST00000391227 145 ntBASIC3.32□□□□□ -1.88
CLHC1Q8NHS4 SAR1AP2-201ENST00000392696 594 ntBASIC3.32□□□□□ -1.88
CLHC1Q8NHS4 ATP5A1P2-201ENST00000412323 255 ntBASIC3.32□□□□□ -1.88
CLHC1Q8NHS4 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.32□□□□□ -1.88
CLHC1Q8NHS4 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CLHC1Q8NHS4 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.32□□□□□ -1.88
CLHC1Q8NHS4 GOT2P5-201ENST00000433995 546 ntBASIC3.32□□□□□ -1.88
CLHC1Q8NHS4 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC3.32□□□□□ -1.88
CLHC1Q8NHS4 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CLHC1Q8NHS4 RAD1P2-201ENST00000446414 663 ntBASIC3.32□□□□□ -1.88
CLHC1Q8NHS4 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.32□□□□□ -1.88
CLHC1Q8NHS4 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.32□□□□□ -1.88
CLHC1Q8NHS4 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.32□□□□□ -1.88
CLHC1Q8NHS4 AL672167.3-201ENST00000465951 960 ntBASIC3.32□□□□□ -1.88
CLHC1Q8NHS4 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.32□□□□□ -1.88
CLHC1Q8NHS4 SYPL1P1-201ENST00000473622 768 ntBASIC3.32□□□□□ -1.88
CLHC1Q8NHS4 AC020893.1-201ENST00000502452 580 ntBASIC3.32□□□□□ -1.88
CLHC1Q8NHS4 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC3.32□□□□□ -1.88
CLHC1Q8NHS4 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.32□□□□□ -1.88
CLHC1Q8NHS4 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC3.32□□□□□ -1.88
CLHC1Q8NHS4 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.32□□□□□ -1.88
CLHC1Q8NHS4 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.32□□□□□ -1.88
CLHC1Q8NHS4 HMGB1P47-201ENST00000511281 589 ntBASIC3.32□□□□□ -1.88
CLHC1Q8NHS4 SNORA70.19-201ENST00000516717 90 ntBASIC3.32□□□□□ -1.88
CLHC1Q8NHS4 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.32□□□□□ -1.88
CLHC1Q8NHS4 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.32□□□□□ -1.88
CLHC1Q8NHS4 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.32□□□□□ -1.88
CLHC1Q8NHS4 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.32□□□□□ -1.88
CLHC1Q8NHS4 AC012182.1-201ENST00000570133 895 ntBASIC3.32□□□□□ -1.88
CLHC1Q8NHS4 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.32□□□□□ -1.88
CLHC1Q8NHS4 MIR3160-1-201ENST00000577972 85 ntBASIC3.32□□□□□ -1.88
CLHC1Q8NHS4 AC067852.3-201ENST00000589177 561 ntBASIC3.32□□□□□ -1.88
CLHC1Q8NHS4 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms