Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
CCDC71LQ8N9Z2 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CCDC71LQ8N9Z2 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CCDC71LQ8N9Z2 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CCDC71LQ8N9Z2 SNORA57.3-201ENST00000411095 141 ntBASIC3.19□□□□□ -1.9
CCDC71LQ8N9Z2 RPL30P2-201ENST00000414021 291 ntBASIC3.19□□□□□ -1.9
CCDC71LQ8N9Z2 EI24P1-201ENST00000416584 867 ntBASIC3.19□□□□□ -1.9
CCDC71LQ8N9Z2 AC127526.1-201ENST00000417526 366 ntBASIC3.19□□□□□ -1.9
CCDC71LQ8N9Z2 AIMP1P1-201ENST00000418670 937 ntBASIC3.19□□□□□ -1.9
CCDC71LQ8N9Z2 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC71LQ8N9Z2 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC3.19□□□□□ -1.9
CCDC71LQ8N9Z2 AC006466.1-201ENST00000438721 289 ntBASIC3.19□□□□□ -1.9
CCDC71LQ8N9Z2 AL138878.2-201ENST00000440581 1241 ntBASIC3.19□□□□□ -1.9
CCDC71LQ8N9Z2 AL592437.1-201ENST00000443781 492 ntBASIC3.19□□□□□ -1.9
CCDC71LQ8N9Z2 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC71LQ8N9Z2 PTGES3P5-201ENST00000455109 434 ntBASIC3.19□□□□□ -1.9
CCDC71LQ8N9Z2 AC087879.1-201ENST00000474343 374 ntBASIC3.19□□□□□ -1.9
CCDC71LQ8N9Z2 AC084198.1-201ENST00000477747 402 ntBASIC3.19□□□□□ -1.9
CCDC71LQ8N9Z2 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC3.19□□□□□ -1.9
CCDC71LQ8N9Z2 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CCDC71LQ8N9Z2 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.19□□□□□ -1.9
CCDC71LQ8N9Z2 IGHV3-76-201ENST00000522465 295 ntBASIC3.19□□□□□ -1.9
CCDC71LQ8N9Z2 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.19□□□□□ -1.9
CCDC71LQ8N9Z2 AC074029.1-201ENST00000552531 1044 ntBASIC3.19□□□□□ -1.9
CCDC71LQ8N9Z2 PSMB7P1-201ENST00000556349 514 ntBASIC3.19□□□□□ -1.9
CCDC71LQ8N9Z2 MTCYBP28-201ENST00000566728 1132 ntBASIC3.19□□□□□ -1.9
CCDC71LQ8N9Z2 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC71LQ8N9Z2 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.19□□□□□ -1.9
CCDC71LQ8N9Z2 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.19□□□□□ -1.9
CCDC71LQ8N9Z2 AL022067.1-201ENST00000602426 454 ntBASIC3.19□□□□□ -1.9
CCDC71LQ8N9Z2 AC093673.2-201ENST00000609674 331 ntBASIC3.19□□□□□ -1.9
CCDC71LQ8N9Z2 AC022960.3-201ENST00000619794 441 ntBASIC3.19□□□□□ -1.9
CCDC71LQ8N9Z2 MIR6719-201ENST00000622428 87 ntBASIC3.19□□□□□ -1.9
CCDC71LQ8N9Z2 MIR4496-201ENST00000635896 61 ntBASIC3.19□□□□□ -1.9
CCDC71LQ8N9Z2 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.19□□□□□ -1.9
CCDC71LQ8N9Z2 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
CCDC71LQ8N9Z2 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.19□□□□□ -1.9
CCDC71LQ8N9Z2 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CCDC71LQ8N9Z2 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.19□□□□□ -1.9
CCDC71LQ8N9Z2 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
CCDC71LQ8N9Z2 SGO1P1-201ENST00000603525 1447 ntBASIC3.19□□□□□ -1.9
CCDC71LQ8N9Z2 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
CCDC71LQ8N9Z2 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CCDC71LQ8N9Z2 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
CCDC71LQ8N9Z2 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
CCDC71LQ8N9Z2 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.18□□□□□ -1.9
CCDC71LQ8N9Z2 UBE2Q2P1-202ENST00000354771 883 ntBASIC3.18□□□□□ -1.9
CCDC71LQ8N9Z2 RNU1-85P-201ENST00000364127 164 ntBASIC3.18□□□□□ -1.9
CCDC71LQ8N9Z2 SNORA51.2-201ENST00000364595 132 ntBASIC3.18□□□□□ -1.9
CCDC71LQ8N9Z2 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.18□□□□□ -1.9
CCDC71LQ8N9Z2 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CCDC71LQ8N9Z2 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC3.18□□□□□ -1.9
CCDC71LQ8N9Z2 RNU6-444P-201ENST00000383988 108 ntBASIC3.18□□□□□ -1.9
CCDC71LQ8N9Z2 MIR16-1-201ENST00000385271 89 ntBASIC3.18□□□□□ -1.9
CCDC71LQ8N9Z2 RNU11-4P-201ENST00000391149 133 ntBASIC3.18□□□□□ -1.9
CCDC71LQ8N9Z2 AL161909.1-201ENST00000397390 712 ntBASIC3.18□□□□□ -1.9
CCDC71LQ8N9Z2 AL391417.1-201ENST00000404100 426 ntBASIC3.18□□□□□ -1.9
CCDC71LQ8N9Z2 RNU6-575P-201ENST00000411326 105 ntBASIC3.18□□□□□ -1.9
CCDC71LQ8N9Z2 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.18□□□□□ -1.9
CCDC71LQ8N9Z2 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC3.18□□□□□ -1.9
CCDC71LQ8N9Z2 UBE2V1P1-201ENST00000430836 445 ntBASIC3.18□□□□□ -1.9
CCDC71LQ8N9Z2 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC3.18□□□□□ -1.9
CCDC71LQ8N9Z2 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC3.18□□□□□ -1.9
CCDC71LQ8N9Z2 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.18□□□□□ -1.9
CCDC71LQ8N9Z2 AC026414.1-201ENST00000504046 698 ntBASIC3.18□□□□□ -1.9
CCDC71LQ8N9Z2 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.18□□□□□ -1.9
CCDC71LQ8N9Z2 AC108475.1-201ENST00000507880 950 ntBASIC3.18□□□□□ -1.9
CCDC71LQ8N9Z2 HPRT1P1-201ENST00000509498 657 ntBASIC3.18□□□□□ -1.9
CCDC71LQ8N9Z2 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CCDC71LQ8N9Z2 RNU6-276P-201ENST00000516114 96 ntBASIC3.18□□□□□ -1.9
CCDC71LQ8N9Z2 AC087369.1-201ENST00000520775 996 ntBASIC3.18□□□□□ -1.9
CCDC71LQ8N9Z2 AC021451.1-201ENST00000523498 1129 ntBASIC3.18□□□□□ -1.9
CCDC71LQ8N9Z2 AC104417.1-201ENST00000523974 751 ntBASIC3.18□□□□□ -1.9
CCDC71LQ8N9Z2 AC010198.2-201ENST00000550612 259 ntBASIC3.18□□□□□ -1.9
CCDC71LQ8N9Z2 SYF2P1-201ENST00000550658 413 ntBASIC3.18□□□□□ -1.9
CCDC71LQ8N9Z2 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.18□□□□□ -1.9
CCDC71LQ8N9Z2 MIR4480-201ENST00000582492 71 ntBASIC3.18□□□□□ -1.9
CCDC71LQ8N9Z2 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC3.18□□□□□ -1.9
CCDC71LQ8N9Z2 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC3.18□□□□□ -1.9
CCDC71LQ8N9Z2 AC069431.2-201ENST00000604149 1099 ntBASIC3.18□□□□□ -1.9
CCDC71LQ8N9Z2 AC002487.1-201ENST00000604565 994 ntBASIC3.18□□□□□ -1.9
CCDC71LQ8N9Z2 HMGN2P28-201ENST00000606102 262 ntBASIC3.18□□□□□ -1.9
CCDC71LQ8N9Z2 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.18□□□□□ -1.9
CCDC71LQ8N9Z2 AC019193.2-201ENST00000610012 634 ntBASIC3.18□□□□□ -1.9
CCDC71LQ8N9Z2 AC016597.2-201ENST00000613256 341 ntBASIC3.18□□□□□ -1.9
CCDC71LQ8N9Z2 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
CCDC71LQ8N9Z2 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
CCDC71LQ8N9Z2 AC010608.2-201ENST00000624830 470 ntBASIC3.18□□□□□ -1.9
CCDC71LQ8N9Z2 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.18□□□□□ -1.9
CCDC71LQ8N9Z2 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.18□□□□□ -1.9
CCDC71LQ8N9Z2 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.18□□□□□ -1.9
CCDC71LQ8N9Z2 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
CCDC71LQ8N9Z2 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
CCDC71LQ8N9Z2 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CCDC71LQ8N9Z2 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
CCDC71LQ8N9Z2 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.17□□□□□ -1.9
CCDC71LQ8N9Z2 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CCDC71LQ8N9Z2 AC111188.2-201ENST00000529697 1387 ntBASIC3.17□□□□□ -1.9
CCDC71LQ8N9Z2 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CCDC71LQ8N9Z2 RNU6-600P-201ENST00000362524 99 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms