Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.26□□□□□ -1.57
SYNPOQ8N3V7 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SYNPOQ8N3V7 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SYNPOQ8N3V7 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
SYNPOQ8N3V7 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
SYNPOQ8N3V7 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.25□□□□□ -1.57
SYNPOQ8N3V7 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SYNPOQ8N3V7 RNA5SP428-201ENST00000365129 132 ntBASIC5.25□□□□□ -1.57
SYNPOQ8N3V7 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
SYNPOQ8N3V7 Y_RNA.582-201ENST00000391023 95 ntBASIC5.25□□□□□ -1.57
SYNPOQ8N3V7 U3.29-201ENST00000391296 212 ntBASIC5.25□□□□□ -1.57
SYNPOQ8N3V7 RPS16P5-201ENST00000406501 404 ntBASIC5.25□□□□□ -1.57
SYNPOQ8N3V7 CCNG1P1-201ENST00000406783 885 ntBASIC5.25□□□□□ -1.57
SYNPOQ8N3V7 ERMN-204ENST00000409925 556 ntTSL 4 BASIC5.25□□□□□ -1.57
SYNPOQ8N3V7 RN7SKP235-201ENST00000410662 305 ntBASIC5.25□□□□□ -1.57
SYNPOQ8N3V7 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC5.25□□□□□ -1.57
SYNPOQ8N3V7 RPS27AP12-201ENST00000429552 465 ntBASIC5.25□□□□□ -1.57
SYNPOQ8N3V7 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.25□□□□□ -1.57
SYNPOQ8N3V7 MTATP6P13-201ENST00000438531 667 ntBASIC5.25□□□□□ -1.57
SYNPOQ8N3V7 Z95327.1-201ENST00000446082 482 ntBASIC5.25□□□□□ -1.57
SYNPOQ8N3V7 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5.25□□□□□ -1.57
SYNPOQ8N3V7 AC098824.1-201ENST00000453565 980 ntBASIC5.25□□□□□ -1.57
SYNPOQ8N3V7 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC5.25□□□□□ -1.57
SYNPOQ8N3V7 RPS24P16-201ENST00000497294 392 ntBASIC5.25□□□□□ -1.57
SYNPOQ8N3V7 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC5.25□□□□□ -1.57
SYNPOQ8N3V7 BTF3P13-201ENST00000513224 490 ntBASIC5.25□□□□□ -1.57
SYNPOQ8N3V7 SNORA70.11-201ENST00000515987 138 ntBASIC5.25□□□□□ -1.57
SYNPOQ8N3V7 SNORA70.13-201ENST00000516116 138 ntBASIC5.25□□□□□ -1.57
SYNPOQ8N3V7 RN7SKP116-201ENST00000516902 319 ntBASIC5.25□□□□□ -1.57
SYNPOQ8N3V7 SCARNA20.4-201ENST00000516969 131 ntBASIC5.25□□□□□ -1.57
SYNPOQ8N3V7 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC5.25□□□□□ -1.57
SYNPOQ8N3V7 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC5.25□□□□□ -1.57
SYNPOQ8N3V7 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC5.25□□□□□ -1.57
SYNPOQ8N3V7 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC5.25□□□□□ -1.57
SYNPOQ8N3V7 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC5.25□□□□□ -1.57
SYNPOQ8N3V7 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC5.25□□□□□ -1.57
SYNPOQ8N3V7 MTATP6P3-201ENST00000581686 676 ntBASIC5.25□□□□□ -1.57
SYNPOQ8N3V7 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC5.25□□□□□ -1.57
SYNPOQ8N3V7 CKS1BP3-201ENST00000600888 237 ntBASIC5.25□□□□□ -1.57
SYNPOQ8N3V7 AL355812.1-201ENST00000603215 216 ntBASIC5.25□□□□□ -1.57
SYNPOQ8N3V7 AC004853.1-201ENST00000604902 698 ntBASIC5.25□□□□□ -1.57
SYNPOQ8N3V7 AC244107.2-201ENST00000611773 76 ntBASIC5.25□□□□□ -1.57
SYNPOQ8N3V7 UBE2Q2P2-203ENST00000613592 761 ntBASIC5.25□□□□□ -1.57
SYNPOQ8N3V7 AC099669.2-201ENST00000616549 437 ntBASIC5.25□□□□□ -1.57
SYNPOQ8N3V7 AL160394.1-201ENST00000624765 724 ntBASIC5.25□□□□□ -1.57
SYNPOQ8N3V7 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC5.25□□□□□ -1.57
SYNPOQ8N3V7 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SYNPOQ8N3V7 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SYNPOQ8N3V7 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
SYNPOQ8N3V7 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SYNPOQ8N3V7 AC093535.2-201ENST00000624769 2326 ntBASIC5.25□□□□□ -1.57
SYNPOQ8N3V7 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SYNPOQ8N3V7 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SYNPOQ8N3V7 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SYNPOQ8N3V7 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.25□□□□□ -1.57
SYNPOQ8N3V7 IRF5P1-201ENST00000504852 2164 ntBASIC5.25□□□□□ -1.57
SYNPOQ8N3V7 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.25□□□□□ -1.57
SYNPOQ8N3V7 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC5.25□□□□□ -1.57
SYNPOQ8N3V7 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
SYNPOQ8N3V7 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
SYNPOQ8N3V7 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
SYNPOQ8N3V7 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SYNPOQ8N3V7 MTND5P26-201ENST00000426018 1752 ntBASIC5.24□□□□□ -1.57
SYNPOQ8N3V7 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SYNPOQ8N3V7 ABCC13-202ENST00000463099 3842 ntBASIC5.24□□□□□ -1.57
SYNPOQ8N3V7 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
SYNPOQ8N3V7 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SYNPOQ8N3V7 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.24□□□□□ -1.57
SYNPOQ8N3V7 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
SYNPOQ8N3V7 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.24□□□□□ -1.57
SYNPOQ8N3V7 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SYNPOQ8N3V7 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SYNPOQ8N3V7 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SYNPOQ8N3V7 AC079741.1-201ENST00000321498 212 ntBASIC5.24□□□□□ -1.57
SYNPOQ8N3V7 RNU1-32P-201ENST00000363937 159 ntBASIC5.24□□□□□ -1.57
SYNPOQ8N3V7 RN7SKP153-201ENST00000365026 316 ntBASIC5.24□□□□□ -1.57
SYNPOQ8N3V7 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
SYNPOQ8N3V7 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
SYNPOQ8N3V7 RNU6ATAC25P-201ENST00000408798 117 ntBASIC5.24□□□□□ -1.57
SYNPOQ8N3V7 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC5.24□□□□□ -1.57
SYNPOQ8N3V7 LAMTOR3P1-201ENST00000428620 370 ntBASIC5.24□□□□□ -1.57
SYNPOQ8N3V7 RABEPKP1-201ENST00000440529 1026 ntBASIC5.24□□□□□ -1.57
SYNPOQ8N3V7 GAPDHP17-201ENST00000449858 1001 ntBASIC5.24□□□□□ -1.57
SYNPOQ8N3V7 MTCO3P20-201ENST00000454926 688 ntBASIC5.24□□□□□ -1.57
SYNPOQ8N3V7 AP1S2P1-201ENST00000457344 379 ntBASIC5.24□□□□□ -1.57
SYNPOQ8N3V7 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC5.24□□□□□ -1.57
SYNPOQ8N3V7 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC5.24□□□□□ -1.57
SYNPOQ8N3V7 PGBD4P4-201ENST00000509673 613 ntBASIC5.24□□□□□ -1.57
SYNPOQ8N3V7 RNU6-430P-201ENST00000517078 107 ntBASIC5.24□□□□□ -1.57
SYNPOQ8N3V7 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC5.24□□□□□ -1.57
SYNPOQ8N3V7 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.24□□□□□ -1.57
SYNPOQ8N3V7 DEFB108A-201ENST00000530110 222 ntBASIC5.24□□□□□ -1.57
SYNPOQ8N3V7 AP000907.2-201ENST00000530827 353 ntBASIC5.24□□□□□ -1.57
SYNPOQ8N3V7 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.24□□□□□ -1.57
SYNPOQ8N3V7 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.24□□□□□ -1.57
SYNPOQ8N3V7 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC5.24□□□□□ -1.57
SYNPOQ8N3V7 HNRNPCP4-201ENST00000571636 900 ntBASIC5.24□□□□□ -1.57
SYNPOQ8N3V7 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.24□□□□□ -1.57
SYNPOQ8N3V7 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC5.24□□□□□ -1.57
SYNPOQ8N3V7 AC008814.1-201ENST00000603797 406 ntBASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms