Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC3.82□□□□□ -1.8
CCDC65Q8IXS2 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CCDC65Q8IXS2 HMGN1P15-201ENST00000513870 295 ntBASIC3.82□□□□□ -1.8
CCDC65Q8IXS2 RN7SKP60-201ENST00000516985 239 ntBASIC3.82□□□□□ -1.8
CCDC65Q8IXS2 RPL12P22-201ENST00000519073 490 ntBASIC3.82□□□□□ -1.8
CCDC65Q8IXS2 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.82□□□□□ -1.8
CCDC65Q8IXS2 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.82□□□□□ -1.8
CCDC65Q8IXS2 AC093014.1-201ENST00000548926 724 ntBASIC3.82□□□□□ -1.8
CCDC65Q8IXS2 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.82□□□□□ -1.8
CCDC65Q8IXS2 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.82□□□□□ -1.8
CCDC65Q8IXS2 AC006557.5-201ENST00000603126 811 ntBASIC3.82□□□□□ -1.8
CCDC65Q8IXS2 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.82□□□□□ -1.8
CCDC65Q8IXS2 AL109618.2-201ENST00000605527 211 ntBASIC3.82□□□□□ -1.8
CCDC65Q8IXS2 AL450270.1-201ENST00000606160 391 ntBASIC3.82□□□□□ -1.8
CCDC65Q8IXS2 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.82□□□□□ -1.8
CCDC65Q8IXS2 MIR6798-201ENST00000612887 67 ntBASIC3.82□□□□□ -1.8
CCDC65Q8IXS2 AL118556.2-201ENST00000614375 824 ntBASIC3.82□□□□□ -1.8
CCDC65Q8IXS2 AC092184.1-201ENST00000625042 715 ntBASIC3.82□□□□□ -1.8
CCDC65Q8IXS2 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
CCDC65Q8IXS2 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.82□□□□□ -1.8
CCDC65Q8IXS2 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.82□□□□□ -1.8
CCDC65Q8IXS2 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
CCDC65Q8IXS2 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.82□□□□□ -1.8
CCDC65Q8IXS2 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CCDC65Q8IXS2 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.81□□□□□ -1.8
CCDC65Q8IXS2 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CCDC65Q8IXS2 SNORA73.2-201ENST00000364946 201 ntBASIC3.81□□□□□ -1.8
CCDC65Q8IXS2 MIR218-2-201ENST00000385006 110 ntBASIC3.81□□□□□ -1.8
CCDC65Q8IXS2 AL356057.1-202ENST00000402263 756 ntBASIC3.81□□□□□ -1.8
CCDC65Q8IXS2 RN7SKP111-201ENST00000410349 271 ntBASIC3.81□□□□□ -1.8
CCDC65Q8IXS2 RNU2-6P-201ENST00000411404 190 ntBASIC3.81□□□□□ -1.8
CCDC65Q8IXS2 RPL31P12-201ENST00000422587 358 ntBASIC3.81□□□□□ -1.8
CCDC65Q8IXS2 AL513174.1-201ENST00000423182 629 ntBASIC3.81□□□□□ -1.8
CCDC65Q8IXS2 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.81□□□□□ -1.8
CCDC65Q8IXS2 FO393419.3-201ENST00000428741 282 ntBASIC3.81□□□□□ -1.8
CCDC65Q8IXS2 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC3.81□□□□□ -1.8
CCDC65Q8IXS2 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.81□□□□□ -1.8
CCDC65Q8IXS2 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.81□□□□□ -1.8
CCDC65Q8IXS2 RBMY2UP-201ENST00000453474 324 ntBASIC3.81□□□□□ -1.8
CCDC65Q8IXS2 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CCDC65Q8IXS2 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.81□□□□□ -1.8
CCDC65Q8IXS2 AC107934.2-201ENST00000518653 310 ntBASIC3.81□□□□□ -1.8
CCDC65Q8IXS2 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
CCDC65Q8IXS2 AC010198.2-201ENST00000550612 259 ntBASIC3.81□□□□□ -1.8
CCDC65Q8IXS2 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC3.81□□□□□ -1.8
CCDC65Q8IXS2 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC3.81□□□□□ -1.8
CCDC65Q8IXS2 AC034105.4-201ENST00000568304 277 ntBASIC3.81□□□□□ -1.8
CCDC65Q8IXS2 AC011468.4-201ENST00000603942 409 ntBASIC3.81□□□□□ -1.8
CCDC65Q8IXS2 AL365400.2-201ENST00000605604 902 ntBASIC3.81□□□□□ -1.8
CCDC65Q8IXS2 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.81□□□□□ -1.8
CCDC65Q8IXS2 AC244258.1-201ENST00000637553 1071 ntBASIC3.81□□□□□ -1.8
CCDC65Q8IXS2 AC007496.3-201ENST00000624987 3443 ntBASIC3.81□□□□□ -1.8
CCDC65Q8IXS2 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CCDC65Q8IXS2 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CCDC65Q8IXS2 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC65Q8IXS2 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.8□□□□□ -1.8
CCDC65Q8IXS2 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC65Q8IXS2 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC3.8□□□□□ -1.8
CCDC65Q8IXS2 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
CCDC65Q8IXS2 MIR184-201ENST00000384962 84 ntBASIC3.8□□□□□ -1.8
CCDC65Q8IXS2 PTMAP2-201ENST00000397627 327 ntBASIC3.8□□□□□ -1.8
CCDC65Q8IXS2 UBE2V1P15-201ENST00000407776 448 ntBASIC3.8□□□□□ -1.8
CCDC65Q8IXS2 Z99755.1-201ENST00000414048 380 ntBASIC3.8□□□□□ -1.8
CCDC65Q8IXS2 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC3.8□□□□□ -1.8
CCDC65Q8IXS2 FAR1P1-201ENST00000427163 934 ntBASIC3.8□□□□□ -1.8
CCDC65Q8IXS2 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.8□□□□□ -1.8
CCDC65Q8IXS2 AC122718.1-201ENST00000439448 744 ntBASIC3.8□□□□□ -1.8
CCDC65Q8IXS2 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.8□□□□□ -1.8
CCDC65Q8IXS2 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.8□□□□□ -1.8
CCDC65Q8IXS2 AC008264.1-201ENST00000447612 367 ntBASIC3.8□□□□□ -1.8
CCDC65Q8IXS2 AC097262.1-201ENST00000452559 548 ntBASIC3.8□□□□□ -1.8
CCDC65Q8IXS2 FAM133DP-201ENST00000464802 691 ntBASIC3.8□□□□□ -1.8
CCDC65Q8IXS2 AC025518.1-201ENST00000479856 347 ntBASIC3.8□□□□□ -1.8
CCDC65Q8IXS2 RPL30P11-201ENST00000495304 339 ntBASIC3.8□□□□□ -1.8
CCDC65Q8IXS2 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.8□□□□□ -1.8
CCDC65Q8IXS2 IGKV2-36-201ENST00000519999 223 ntBASIC3.8□□□□□ -1.8
CCDC65Q8IXS2 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.8□□□□□ -1.8
CCDC65Q8IXS2 IGKV2D-19-201ENST00000523346 262 ntBASIC3.8□□□□□ -1.8
CCDC65Q8IXS2 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.8□□□□□ -1.8
CCDC65Q8IXS2 OR5B10P-201ENST00000532869 642 ntBASIC3.8□□□□□ -1.8
CCDC65Q8IXS2 CSNK1A1P1-202ENST00000563423 981 ntBASIC3.8□□□□□ -1.8
CCDC65Q8IXS2 AC233266.2-201ENST00000567067 528 ntBASIC3.8□□□□□ -1.8
CCDC65Q8IXS2 AC010735.1-201ENST00000567305 1026 ntBASIC3.8□□□□□ -1.8
CCDC65Q8IXS2 AC067852.3-201ENST00000589177 561 ntBASIC3.8□□□□□ -1.8
CCDC65Q8IXS2 RMST_8.1-201ENST00000610287 165 ntBASIC3.8□□□□□ -1.8
CCDC65Q8IXS2 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC65Q8IXS2 AC034229.5-201ENST00000624258 185 ntBASIC3.8□□□□□ -1.8
CCDC65Q8IXS2 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
CCDC65Q8IXS2 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC65Q8IXS2 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC65Q8IXS2 AC058791.1-201ENST00000608412 3198 ntBASIC3.79□□□□□ -1.8
CCDC65Q8IXS2 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC65Q8IXS2 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC65Q8IXS2 AC017071.1-201ENST00000564407 2204 ntBASIC3.79□□□□□ -1.8
CCDC65Q8IXS2 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC65Q8IXS2 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC65Q8IXS2 METTL21EP-201ENST00000298105 713 ntBASIC3.79□□□□□ -1.8
CCDC65Q8IXS2 SNORA62.3-201ENST00000365110 153 ntBASIC3.79□□□□□ -1.8
CCDC65Q8IXS2 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC65Q8IXS2 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms