Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC4.69□□□□□ -1.66
VRK3Q8IV63 RSU1P3-201ENST00000412878 835 ntBASIC4.69□□□□□ -1.66
VRK3Q8IV63 AC114755.2-201ENST00000413520 361 ntBASIC4.69□□□□□ -1.66
VRK3Q8IV63 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC4.69□□□□□ -1.66
VRK3Q8IV63 OR2AH1P-201ENST00000425717 928 ntBASIC4.69□□□□□ -1.66
VRK3Q8IV63 ELOCP14-201ENST00000428070 331 ntBASIC4.69□□□□□ -1.66
VRK3Q8IV63 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC4.69□□□□□ -1.66
VRK3Q8IV63 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.69□□□□□ -1.66
VRK3Q8IV63 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.69□□□□□ -1.66
VRK3Q8IV63 PPIAP17-201ENST00000438507 471 ntBASIC4.69□□□□□ -1.66
VRK3Q8IV63 ELOCP7-201ENST00000439968 331 ntBASIC4.69□□□□□ -1.66
VRK3Q8IV63 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC4.69□□□□□ -1.66
VRK3Q8IV63 RBMY2TP-201ENST00000451162 947 ntBASIC4.69□□□□□ -1.66
VRK3Q8IV63 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.69□□□□□ -1.66
VRK3Q8IV63 RPL18AP17-201ENST00000455326 198 ntBASIC4.69□□□□□ -1.66
VRK3Q8IV63 RPL35AP28-201ENST00000459730 331 ntBASIC4.69□□□□□ -1.66
VRK3Q8IV63 AC091564.1-201ENST00000464563 479 ntBASIC4.69□□□□□ -1.66
VRK3Q8IV63 AC087312.1-201ENST00000471411 480 ntBASIC4.69□□□□□ -1.66
VRK3Q8IV63 AC111193.1-201ENST00000504097 155 ntBASIC4.69□□□□□ -1.66
VRK3Q8IV63 SUMO2P4-201ENST00000504193 276 ntBASIC4.69□□□□□ -1.66
VRK3Q8IV63 HMGB1P29-201ENST00000505659 499 ntBASIC4.69□□□□□ -1.66
VRK3Q8IV63 HMGB3P16-201ENST00000508037 287 ntBASIC4.69□□□□□ -1.66
VRK3Q8IV63 NDUFB4P2-201ENST00000509515 391 ntBASIC4.69□□□□□ -1.66
VRK3Q8IV63 AC048346.1-201ENST00000510247 144 ntBASIC4.69□□□□□ -1.66
VRK3Q8IV63 OR7H2P-201ENST00000513483 306 ntBASIC4.69□□□□□ -1.66
VRK3Q8IV63 RFPL4AP5-201ENST00000514977 504 ntBASIC4.69□□□□□ -1.66
VRK3Q8IV63 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC4.69□□□□□ -1.66
VRK3Q8IV63 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.69□□□□□ -1.66
VRK3Q8IV63 AP001189.2-201ENST00000527320 189 ntBASIC4.69□□□□□ -1.66
VRK3Q8IV63 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC4.69□□□□□ -1.66
VRK3Q8IV63 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
VRK3Q8IV63 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.69□□□□□ -1.66
VRK3Q8IV63 AC138915.2-201ENST00000569776 97 ntBASIC4.69□□□□□ -1.66
VRK3Q8IV63 MIR5697-201ENST00000578045 78 ntBASIC4.69□□□□□ -1.66
VRK3Q8IV63 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.69□□□□□ -1.66
VRK3Q8IV63 BNIP3P11-201ENST00000603878 563 ntBASIC4.69□□□□□ -1.66
VRK3Q8IV63 AC010680.3-201ENST00000604215 520 ntBASIC4.69□□□□□ -1.66
VRK3Q8IV63 FAM25E-202ENST00000608562 189 ntBASIC4.69□□□□□ -1.66
VRK3Q8IV63 MLECP1-201ENST00000615893 709 ntBASIC4.69□□□□□ -1.66
VRK3Q8IV63 FRG1KP-201ENST00000623592 341 ntBASIC4.69□□□□□ -1.66
VRK3Q8IV63 MIR1321-201ENST00000637766 79 ntBASIC4.69□□□□□ -1.66
VRK3Q8IV63 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.69□□□□□ -1.66
VRK3Q8IV63 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
VRK3Q8IV63 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.69□□□□□ -1.66
VRK3Q8IV63 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
VRK3Q8IV63 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
VRK3Q8IV63 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
VRK3Q8IV63 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
VRK3Q8IV63 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.69□□□□□ -1.66
VRK3Q8IV63 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
VRK3Q8IV63 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
VRK3Q8IV63 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.69□□□□□ -1.66
VRK3Q8IV63 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.68□□□□□ -1.66
VRK3Q8IV63 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
VRK3Q8IV63 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
VRK3Q8IV63 AC025574.1-201ENST00000554784 1653 ntBASIC4.68□□□□□ -1.66
VRK3Q8IV63 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.68□□□□□ -1.66
VRK3Q8IV63 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
VRK3Q8IV63 RNU6-216P-201ENST00000363282 104 ntBASIC4.68□□□□□ -1.66
VRK3Q8IV63 Y_RNA.296-201ENST00000364930 108 ntBASIC4.68□□□□□ -1.66
VRK3Q8IV63 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
VRK3Q8IV63 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.68□□□□□ -1.66
VRK3Q8IV63 AC109780.2-201ENST00000413467 845 ntBASIC4.68□□□□□ -1.66
VRK3Q8IV63 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
VRK3Q8IV63 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.68□□□□□ -1.66
VRK3Q8IV63 C1DP2-201ENST00000418167 426 ntBASIC4.68□□□□□ -1.66
VRK3Q8IV63 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.68□□□□□ -1.66
VRK3Q8IV63 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC4.68□□□□□ -1.66
VRK3Q8IV63 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC4.68□□□□□ -1.66
VRK3Q8IV63 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.68□□□□□ -1.66
VRK3Q8IV63 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC4.68□□□□□ -1.66
VRK3Q8IV63 BX890604.2-201ENST00000427883 474 ntBASIC4.68□□□□□ -1.66
VRK3Q8IV63 AL513175.1-201ENST00000431492 780 ntBASIC4.68□□□□□ -1.66
VRK3Q8IV63 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.68□□□□□ -1.66
VRK3Q8IV63 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC4.68□□□□□ -1.66
VRK3Q8IV63 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.68□□□□□ -1.66
VRK3Q8IV63 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC4.68□□□□□ -1.66
VRK3Q8IV63 RGS5-217ENST00000451759 835 ntTSL 3 BASIC4.68□□□□□ -1.66
VRK3Q8IV63 BX322784.1-201ENST00000455793 1077 ntBASIC4.68□□□□□ -1.66
VRK3Q8IV63 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.68□□□□□ -1.66
VRK3Q8IV63 RN7SL610P-201ENST00000463845 291 ntBASIC4.68□□□□□ -1.66
VRK3Q8IV63 TRBV8-2-201ENST00000475637 270 ntBASIC4.68□□□□□ -1.66
VRK3Q8IV63 AC104687.1-201ENST00000485829 412 ntBASIC4.68□□□□□ -1.66
VRK3Q8IV63 RN7SL346P-201ENST00000491561 294 ntBASIC4.68□□□□□ -1.66
VRK3Q8IV63 MTCYBP17-201ENST00000503579 789 ntBASIC4.68□□□□□ -1.66
VRK3Q8IV63 SCARNA22-201ENST00000503991 125 ntBASIC4.68□□□□□ -1.66
VRK3Q8IV63 AC117522.3-201ENST00000507974 584 ntBASIC4.68□□□□□ -1.66
VRK3Q8IV63 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC4.68□□□□□ -1.66
VRK3Q8IV63 AC026412.2-201ENST00000512270 1075 ntBASIC4.68□□□□□ -1.66
VRK3Q8IV63 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.68□□□□□ -1.66
VRK3Q8IV63 MTCO1P30-201ENST00000515244 580 ntBASIC4.68□□□□□ -1.66
VRK3Q8IV63 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.68□□□□□ -1.66
VRK3Q8IV63 Y_RNA.701-201ENST00000516812 110 ntBASIC4.68□□□□□ -1.66
VRK3Q8IV63 RNU6-1261P-201ENST00000517194 104 ntBASIC4.68□□□□□ -1.66
VRK3Q8IV63 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.68□□□□□ -1.66
VRK3Q8IV63 AC022878.1-201ENST00000530684 149 ntBASIC4.68□□□□□ -1.66
VRK3Q8IV63 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.68□□□□□ -1.66
VRK3Q8IV63 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC4.68□□□□□ -1.66
VRK3Q8IV63 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.68□□□□□ -1.66
VRK3Q8IV63 MIR548Y-201ENST00000582739 110 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 144.7 ms