Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 PSMB7P1-201ENST00000556349 514 ntBASIC4.01□□□□□ -1.77
SHFQ7M4L6 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC4.01□□□□□ -1.77
SHFQ7M4L6 ANKRD36BP2-206ENST00000575193 1245 ntBASIC4.01□□□□□ -1.77
SHFQ7M4L6 MTCYBP22-201ENST00000603788 447 ntBASIC4.01□□□□□ -1.77
SHFQ7M4L6 AC106028.5-201ENST00000610332 395 ntBASIC4.01□□□□□ -1.77
SHFQ7M4L6 AC078899.5-201ENST00000612475 178 ntBASIC4.01□□□□□ -1.77
SHFQ7M4L6 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.01□□□□□ -1.77
SHFQ7M4L6 MIR7844-201ENST00000616161 122 ntBASIC4.01□□□□□ -1.77
SHFQ7M4L6 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.01□□□□□ -1.77
SHFQ7M4L6 MIR6853-201ENST00000619642 74 ntBASIC4.01□□□□□ -1.77
SHFQ7M4L6 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.01□□□□□ -1.77
SHFQ7M4L6 MIR6886-201ENST00000619864 61 ntBASIC4.01□□□□□ -1.77
SHFQ7M4L6 AC068870.2-201ENST00000620635 389 ntBASIC4.01□□□□□ -1.77
SHFQ7M4L6 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC4.01□□□□□ -1.77
SHFQ7M4L6 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.01□□□□□ -1.77
SHFQ7M4L6 AL450326.2-201ENST00000421913 1962 ntBASIC4.01□□□□□ -1.77
SHFQ7M4L6 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
SHFQ7M4L6 AL390237.1-201ENST00000404226 1415 ntBASIC4.01□□□□□ -1.77
SHFQ7M4L6 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SHFQ7M4L6 AL079343.1-201ENST00000572358 1771 ntBASIC4.01□□□□□ -1.77
SHFQ7M4L6 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.01□□□□□ -1.77
SHFQ7M4L6 MTND5P28-201ENST00000438005 1594 ntBASIC4.01□□□□□ -1.77
SHFQ7M4L6 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.01□□□□□ -1.77
SHFQ7M4L6 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SHFQ7M4L6 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.01□□□□□ -1.77
SHFQ7M4L6 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.01□□□□□ -1.77
SHFQ7M4L6 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
SHFQ7M4L6 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
SHFQ7M4L6 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SHFQ7M4L6 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4□□□□□ -1.77
SHFQ7M4L6 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SHFQ7M4L6 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SHFQ7M4L6 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
SHFQ7M4L6 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC4□□□□□ -1.77
SHFQ7M4L6 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SHFQ7M4L6 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4□□□□□ -1.77
SHFQ7M4L6 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4□□□□□ -1.77
SHFQ7M4L6 RNU6-1243P-201ENST00000364028 107 ntBASIC4□□□□□ -1.77
SHFQ7M4L6 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SHFQ7M4L6 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC4□□□□□ -1.77
SHFQ7M4L6 SNORA51.8-201ENST00000384234 132 ntBASIC4□□□□□ -1.77
SHFQ7M4L6 RN7SKP229-201ENST00000410465 302 ntBASIC4□□□□□ -1.77
SHFQ7M4L6 AL133384.1-201ENST00000412744 351 ntBASIC4□□□□□ -1.77
SHFQ7M4L6 NUP35P2-201ENST00000416748 943 ntBASIC4□□□□□ -1.77
SHFQ7M4L6 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4□□□□□ -1.77
SHFQ7M4L6 KCTD10P1-201ENST00000434203 625 ntBASIC4□□□□□ -1.77
SHFQ7M4L6 AL627308.1-201ENST00000435693 821 ntBASIC4□□□□□ -1.77
SHFQ7M4L6 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC4□□□□□ -1.77
SHFQ7M4L6 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4□□□□□ -1.77
SHFQ7M4L6 RPL23AP93-201ENST00000440847 484 ntBASIC4□□□□□ -1.77
SHFQ7M4L6 AC073648.4-201ENST00000442655 781 ntBASIC4□□□□□ -1.77
SHFQ7M4L6 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4□□□□□ -1.77
SHFQ7M4L6 MTCO2P18-201ENST00000457151 658 ntBASIC4□□□□□ -1.77
SHFQ7M4L6 APOOP2-201ENST00000461561 539 ntBASIC4□□□□□ -1.77
SHFQ7M4L6 AC097493.1-201ENST00000463958 372 ntBASIC4□□□□□ -1.77
SHFQ7M4L6 RPS15AP17-201ENST00000470598 390 ntBASIC4□□□□□ -1.77
SHFQ7M4L6 F11-205ENST00000492972 1204 ntTSL 2 BASIC4□□□□□ -1.77
SHFQ7M4L6 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC4□□□□□ -1.77
SHFQ7M4L6 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC4□□□□□ -1.77
SHFQ7M4L6 Y_RNA.655-201ENST00000515919 96 ntBASIC4□□□□□ -1.77
SHFQ7M4L6 AC060788.1-201ENST00000521318 469 ntBASIC4□□□□□ -1.77
SHFQ7M4L6 IFITM8P-201ENST00000522529 394 ntBASIC4□□□□□ -1.77
SHFQ7M4L6 AC087276.1-201ENST00000529659 480 ntBASIC4□□□□□ -1.77
SHFQ7M4L6 AP000676.2-201ENST00000529711 301 ntBASIC4□□□□□ -1.77
SHFQ7M4L6 ZNF705CP-201ENST00000530515 889 ntBASIC4□□□□□ -1.77
SHFQ7M4L6 AC092851.1-201ENST00000535964 478 ntBASIC4□□□□□ -1.77
SHFQ7M4L6 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC4□□□□□ -1.77
SHFQ7M4L6 AC137768.1-201ENST00000549998 553 ntBASIC4□□□□□ -1.77
SHFQ7M4L6 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC4□□□□□ -1.77
SHFQ7M4L6 AC023161.2-201ENST00000551218 780 ntBASIC4□□□□□ -1.77
SHFQ7M4L6 AC024909.2-201ENST00000553035 286 ntBASIC4□□□□□ -1.77
SHFQ7M4L6 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4□□□□□ -1.77
SHFQ7M4L6 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4□□□□□ -1.77
SHFQ7M4L6 MIR4646-201ENST00000580775 63 ntBASIC4□□□□□ -1.77
SHFQ7M4L6 AC073091.2-201ENST00000603205 907 ntBASIC4□□□□□ -1.77
SHFQ7M4L6 AC025946.2-201ENST00000603398 234 ntBASIC4□□□□□ -1.77
SHFQ7M4L6 AC113194.1-201ENST00000606037 500 ntBASIC4□□□□□ -1.77
SHFQ7M4L6 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC4□□□□□ -1.77
SHFQ7M4L6 AC090948.2-201ENST00000607363 564 ntBASIC4□□□□□ -1.77
SHFQ7M4L6 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC4□□□□□ -1.77
SHFQ7M4L6 AC068722.2-201ENST00000618734 544 ntBASIC4□□□□□ -1.77
SHFQ7M4L6 AL356266.1-201ENST00000623311 483 ntBASIC4□□□□□ -1.77
SHFQ7M4L6 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
SHFQ7M4L6 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
SHFQ7M4L6 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
SHFQ7M4L6 OR4G11P-202ENST00000642116 1414 ntBASIC4□□□□□ -1.77
SHFQ7M4L6 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SHFQ7M4L6 LINC00622-201ENST00000562811 1570 ntBASIC4□□□□□ -1.77
SHFQ7M4L6 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
SHFQ7M4L6 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
SHFQ7M4L6 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4□□□□□ -1.77
SHFQ7M4L6 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC4□□□□□ -1.77
SHFQ7M4L6 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SHFQ7M4L6 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SHFQ7M4L6 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4□□□□□ -1.77
SHFQ7M4L6 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
SHFQ7M4L6 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.99□□□□□ -1.77
SHFQ7M4L6 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SHFQ7M4L6 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
SHFQ7M4L6 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms