Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
LRRK2Q5S007 MFSD8-233ENST00000641482 4860 ntBASIC2.56□□□□□ -2
LRRK2Q5S007 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
LRRK2Q5S007 RNA5SP99-201ENST00000364020 114 ntBASIC2.56□□□□□ -2
LRRK2Q5S007 RNU4-53P-201ENST00000410828 140 ntBASIC2.56□□□□□ -2
LRRK2Q5S007 JKAMPP1-201ENST00000413804 919 ntBASIC2.56□□□□□ -2
LRRK2Q5S007 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC2.56□□□□□ -2
LRRK2Q5S007 YWHAEP5-201ENST00000431545 765 ntBASIC2.56□□□□□ -2
LRRK2Q5S007 TRBV8-2-201ENST00000475637 270 ntBASIC2.56□□□□□ -2
LRRK2Q5S007 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC2.56□□□□□ -2
LRRK2Q5S007 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC2.56□□□□□ -2
LRRK2Q5S007 AC093524.1-201ENST00000564266 1094 ntBASIC2.56□□□□□ -2
LRRK2Q5S007 AC015917.1-201ENST00000579654 510 ntBASIC2.56□□□□□ -2
LRRK2Q5S007 PRELID3BP8-201ENST00000604148 295 ntBASIC2.56□□□□□ -2
LRRK2Q5S007 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC2.56□□□□□ -2
LRRK2Q5S007 DLD-204ENST00000437604 1859 ntTSL 2 BASIC2.56□□□□□ -2
LRRK2Q5S007 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.56□□□□□ -2
LRRK2Q5S007 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.56□□□□□ -2
LRRK2Q5S007 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC2.56□□□□□ -2
LRRK2Q5S007 AC108206.1-201ENST00000570186 4159 ntBASIC2.56□□□□□ -2
LRRK2Q5S007 RNVU1-3-201ENST00000364313 161 ntBASIC2.56□□□□□ -2
LRRK2Q5S007 SNORA3.2-201ENST00000408221 125 ntBASIC2.56□□□□□ -2
LRRK2Q5S007 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.56□□□□□ -2
LRRK2Q5S007 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.56□□□□□ -2
LRRK2Q5S007 AL592045.1-201ENST00000429867 352 ntBASIC2.56□□□□□ -2
LRRK2Q5S007 SEPT14P1-201ENST00000458703 648 ntBASIC2.56□□□□□ -2
LRRK2Q5S007 OR9N1P-201ENST00000491296 333 ntBASIC2.56□□□□□ -2
LRRK2Q5S007 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC2.56□□□□□ -2
LRRK2Q5S007 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC2.56□□□□□ -2
LRRK2Q5S007 MIR1273D-201ENST00000577266 86 ntBASIC2.56□□□□□ -2
LRRK2Q5S007 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.56□□□□□ -2
LRRK2Q5S007 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.56□□□□□ -2
LRRK2Q5S007 AL669942.2-201ENST00000620352 697 ntBASIC2.56□□□□□ -2
LRRK2Q5S007 AC007318.2-201ENST00000620999 243 ntBASIC2.56□□□□□ -2
LRRK2Q5S007 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC2.56□□□□□ -2
LRRK2Q5S007 AC073476.4-201ENST00000628409 72 ntBASIC2.56□□□□□ -2
LRRK2Q5S007 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.55□□□□□ -2
LRRK2Q5S007 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC2.55□□□□□ -2
LRRK2Q5S007 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
LRRK2Q5S007 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
LRRK2Q5S007 AL590103.1-201ENST00000434488 307 ntBASIC2.55□□□□□ -2
LRRK2Q5S007 SKP1P1-201ENST00000438081 489 ntBASIC2.55□□□□□ -2
LRRK2Q5S007 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC2.55□□□□□ -2
LRRK2Q5S007 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.55□□□□□ -2
LRRK2Q5S007 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC2.55□□□□□ -2
LRRK2Q5S007 AC005921.1-201ENST00000510589 286 ntBASIC2.55□□□□□ -2
LRRK2Q5S007 AL158062.1-201ENST00000619632 745 ntBASIC2.55□□□□□ -2
LRRK2Q5S007 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.55□□□□□ -2
LRRK2Q5S007 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC2.55□□□□□ -2
LRRK2Q5S007 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
LRRK2Q5S007 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
LRRK2Q5S007 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
LRRK2Q5S007 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
LRRK2Q5S007 Y_RNA.338-201ENST00000365320 114 ntBASIC2.54□□□□□ -2
LRRK2Q5S007 AL590290.1-201ENST00000405336 380 ntBASIC2.54□□□□□ -2
LRRK2Q5S007 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC2.54□□□□□ -2
LRRK2Q5S007 AL137014.1-201ENST00000420490 1226 ntBASIC2.54□□□□□ -2
LRRK2Q5S007 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC2.54□□□□□ -2
LRRK2Q5S007 OR2AS1P-201ENST00000427827 319 ntBASIC2.54□□□□□ -2
LRRK2Q5S007 ELOCP8-201ENST00000439309 332 ntBASIC2.54□□□□□ -2
LRRK2Q5S007 ELOCP15-201ENST00000442090 332 ntBASIC2.54□□□□□ -2
LRRK2Q5S007 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC2.54□□□□□ -2
LRRK2Q5S007 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.54□□□□□ -2
LRRK2Q5S007 MIR4498-201ENST00000577599 66 ntBASIC2.54□□□□□ -2
LRRK2Q5S007 AC074276.2-201ENST00000619891 348 ntBASIC2.54□□□□□ -2
LRRK2Q5S007 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
LRRK2Q5S007 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC2.54□□□□□ -2
LRRK2Q5S007 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.54□□□□□ -2
LRRK2Q5S007 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
LRRK2Q5S007 Y_RNA.122-201ENST00000363331 96 ntBASIC2.54□□□□□ -2
LRRK2Q5S007 MIR613-201ENST00000385248 95 ntBASIC2.54□□□□□ -2
LRRK2Q5S007 MIR518E-201ENST00000385252 88 ntBASIC2.54□□□□□ -2
LRRK2Q5S007 MRPS18BP2-201ENST00000434310 759 ntBASIC2.54□□□□□ -2
LRRK2Q5S007 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
LRRK2Q5S007 MTND4LP16-201ENST00000440828 295 ntBASIC2.54□□□□□ -2
LRRK2Q5S007 RPL5P30-201ENST00000465511 891 ntBASIC2.54□□□□□ -2
LRRK2Q5S007 TCP11X3P-202ENST00000514289 1254 ntBASIC2.54□□□□□ -2
LRRK2Q5S007 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.54□□□□□ -2
LRRK2Q5S007 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC2.54□□□□□ -2
LRRK2Q5S007 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC2.54□□□□□ -2
LRRK2Q5S007 AC009163.5-201ENST00000575421 637 ntBASIC2.54□□□□□ -2
LRRK2Q5S007 AC007566.2-201ENST00000603642 413 ntBASIC2.54□□□□□ -2
LRRK2Q5S007 ZNF72P-201ENST00000425869 1908 ntBASIC2.54□□□□□ -2
LRRK2Q5S007 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC2.54□□□□□ -2
LRRK2Q5S007 SNORA25.9-201ENST00000365087 128 ntBASIC2.53□□□□□ -2
LRRK2Q5S007 RNU6-14P-201ENST00000384630 106 ntBASIC2.53□□□□□ -2
LRRK2Q5S007 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC2.53□□□□□ -2
LRRK2Q5S007 SCARNA20.6-201ENST00000517251 106 ntBASIC2.53□□□□□ -2
LRRK2Q5S007 IGKV2-36-201ENST00000519999 223 ntBASIC2.53□□□□□ -2
LRRK2Q5S007 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC2.53□□□□□ -2
LRRK2Q5S007 AL353997.5-201ENST00000618886 171 ntBASIC2.53□□□□□ -2
LRRK2Q5S007 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
LRRK2Q5S007 Y_RNA.140-201ENST00000363474 103 ntBASIC2.53□□□□□ -2
LRRK2Q5S007 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.53□□□□□ -2
LRRK2Q5S007 RPL21P75-201ENST00000396599 483 ntBASIC2.53□□□□□ -2
LRRK2Q5S007 RPL21P1-201ENST00000399532 476 ntBASIC2.53□□□□□ -2
LRRK2Q5S007 RPL21P28-201ENST00000401418 483 ntBASIC2.53□□□□□ -2
LRRK2Q5S007 AL592114.1-201ENST00000403842 483 ntBASIC2.53□□□□□ -2
LRRK2Q5S007 RNU4-26P-201ENST00000410270 107 ntBASIC2.53□□□□□ -2
LRRK2Q5S007 AC010401.1-201ENST00000463867 348 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms