Protein–RNA interactions for Protein: Q16610

ECM1, Extracellular matrix protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1Q16610 AC073465.2-201ENST00000440938 498 ntBASIC6.11□□□□□ -1.43
ECM1Q16610 DNAJC19P5-201ENST00000443295 316 ntBASIC6.11□□□□□ -1.43
ECM1Q16610 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC6.11□□□□□ -1.43
ECM1Q16610 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC6.11□□□□□ -1.43
ECM1Q16610 RPS4XP10-201ENST00000465034 731 ntBASIC6.11□□□□□ -1.43
ECM1Q16610 RN7SL547P-201ENST00000490793 290 ntBASIC6.11□□□□□ -1.43
ECM1Q16610 AC093278.1-201ENST00000494700 600 ntBASIC6.11□□□□□ -1.43
ECM1Q16610 PCBP2P3-201ENST00000509726 843 ntBASIC6.11□□□□□ -1.43
ECM1Q16610 AC110792.2-201ENST00000510278 224 ntBASIC6.11□□□□□ -1.43
ECM1Q16610 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC6.11□□□□□ -1.43
ECM1Q16610 SNORA19.2-201ENST00000516013 114 ntBASIC6.11□□□□□ -1.43
ECM1Q16610 RN7SKP82-201ENST00000516786 223 ntBASIC6.11□□□□□ -1.43
ECM1Q16610 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC6.11□□□□□ -1.43
ECM1Q16610 BNIP3P6-201ENST00000549284 499 ntBASIC6.11□□□□□ -1.43
ECM1Q16610 AC011611.1-201ENST00000552179 197 ntBASIC6.11□□□□□ -1.43
ECM1Q16610 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC6.11□□□□□ -1.43
ECM1Q16610 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC6.11□□□□□ -1.43
ECM1Q16610 uc_338.5-201ENST00000611839 155 ntBASIC6.11□□□□□ -1.43
ECM1Q16610 MIR6133-201ENST00000617057 108 ntBASIC6.11□□□□□ -1.43
ECM1Q16610 THAP12P4-201ENST00000528321 2266 ntBASIC6.11□□□□□ -1.43
ECM1Q16610 AC239868.2-201ENST00000564237 4527 ntBASIC6.11□□□□□ -1.43
ECM1Q16610 AL034549.2-201ENST00000618285 3373 ntBASIC6.11□□□□□ -1.43
ECM1Q16610 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC6.11□□□□□ -1.43
ECM1Q16610 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
ECM1Q16610 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
ECM1Q16610 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
ECM1Q16610 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
ECM1Q16610 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
ECM1Q16610 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC6.1□□□□□ -1.43
ECM1Q16610 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
ECM1Q16610 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
ECM1Q16610 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC6.1□□□□□ -1.43
ECM1Q16610 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
ECM1Q16610 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC6.1□□□□□ -1.43
ECM1Q16610 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC6.1□□□□□ -1.43
ECM1Q16610 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
ECM1Q16610 MIR133B-201ENST00000362210 119 ntBASIC6.1□□□□□ -1.43
ECM1Q16610 RNU5A-8P-201ENST00000364102 114 ntBASIC6.1□□□□□ -1.43
ECM1Q16610 RNU6-1227P-201ENST00000383981 107 ntBASIC6.1□□□□□ -1.43
ECM1Q16610 PPIAP9-201ENST00000403866 498 ntBASIC6.1□□□□□ -1.43
ECM1Q16610 AL354719.1-201ENST00000406535 843 ntBASIC6.1□□□□□ -1.43
ECM1Q16610 TRAPPC2P10-201ENST00000415662 323 ntBASIC6.1□□□□□ -1.43
ECM1Q16610 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC6.1□□□□□ -1.43
ECM1Q16610 TIMM9P1-201ENST00000436122 256 ntBASIC6.1□□□□□ -1.43
ECM1Q16610 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC6.1□□□□□ -1.43
ECM1Q16610 TRAPPC2P8-201ENST00000440676 396 ntBASIC6.1□□□□□ -1.43
ECM1Q16610 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC6.1□□□□□ -1.43
ECM1Q16610 RN7SL188P-201ENST00000469842 285 ntBASIC6.1□□□□□ -1.43
ECM1Q16610 AC022034.3-201ENST00000471393 478 ntBASIC6.1□□□□□ -1.43
ECM1Q16610 AC100832.1-201ENST00000471945 383 ntBASIC6.1□□□□□ -1.43
ECM1Q16610 RPL32P9-201ENST00000487963 407 ntBASIC6.1□□□□□ -1.43
ECM1Q16610 COX7A2P2-201ENST00000505291 250 ntBASIC6.1□□□□□ -1.43
ECM1Q16610 GLUD1P3-202ENST00000508551 200 ntBASIC6.1□□□□□ -1.43
ECM1Q16610 SCARNA20.4-201ENST00000516969 131 ntBASIC6.1□□□□□ -1.43
ECM1Q16610 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC6.1□□□□□ -1.43
ECM1Q16610 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC6.1□□□□□ -1.43
ECM1Q16610 AC022790.1-201ENST00000522872 204 ntBASIC6.1□□□□□ -1.43
ECM1Q16610 AC027026.1-201ENST00000532323 742 ntBASIC6.1□□□□□ -1.43
ECM1Q16610 AP004607.2-201ENST00000533949 322 ntBASIC6.1□□□□□ -1.43
ECM1Q16610 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC6.1□□□□□ -1.43
ECM1Q16610 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC6.1□□□□□ -1.43
ECM1Q16610 AC012182.1-201ENST00000570133 895 ntBASIC6.1□□□□□ -1.43
ECM1Q16610 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC6.1□□□□□ -1.43
ECM1Q16610 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC6.1□□□□□ -1.43
ECM1Q16610 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC6.1□□□□□ -1.43
ECM1Q16610 COX6CP3-201ENST00000580869 223 ntBASIC6.1□□□□□ -1.43
ECM1Q16610 MIR4795-201ENST00000584182 89 ntBASIC6.1□□□□□ -1.43
ECM1Q16610 AC011445.2-201ENST00000599274 173 ntBASIC6.1□□□□□ -1.43
ECM1Q16610 AC004908.2-201ENST00000609090 574 ntBASIC6.1□□□□□ -1.43
ECM1Q16610 AL139124.1-201ENST00000609123 421 ntBASIC6.1□□□□□ -1.43
ECM1Q16610 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC6.1□□□□□ -1.43
ECM1Q16610 MIR4302-201ENST00000638058 60 ntBASIC6.1□□□□□ -1.43
ECM1Q16610 AC100810.6-201ENST00000638068 285 ntBASIC6.1□□□□□ -1.43
ECM1Q16610 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC6.1□□□□□ -1.43
ECM1Q16610 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
ECM1Q16610 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
ECM1Q16610 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
ECM1Q16610 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
ECM1Q16610 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.1□□□□□ -1.43
ECM1Q16610 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC6.1□□□□□ -1.43
ECM1Q16610 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
ECM1Q16610 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.09□□□□□ -1.43
ECM1Q16610 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.09□□□□□ -1.43
ECM1Q16610 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC6.09□□□□□ -1.43
ECM1Q16610 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
ECM1Q16610 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
ECM1Q16610 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
ECM1Q16610 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.09□□□□□ -1.43
ECM1Q16610 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC6.09□□□□□ -1.43
ECM1Q16610 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
ECM1Q16610 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
ECM1Q16610 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
ECM1Q16610 RNA5SP453-201ENST00000362503 119 ntBASIC6.09□□□□□ -1.43
ECM1Q16610 SNORA51.2-201ENST00000364595 132 ntBASIC6.09□□□□□ -1.43
ECM1Q16610 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
ECM1Q16610 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
ECM1Q16610 CD3D-202ENST00000392884 476 ntTSL 2 BASIC6.09□□□□□ -1.43
ECM1Q16610 AL133388.1-201ENST00000404509 287 ntBASIC6.09□□□□□ -1.43
ECM1Q16610 RNU6-1068P-201ENST00000410958 103 ntBASIC6.09□□□□□ -1.43
ECM1Q16610 RN7SKP140-201ENST00000411196 284 ntBASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms