Protein–RNA interactions for Protein: Q15853

USF2, Upstream stimulatory factor 2, humanhuman

Predicted RBP Predictions only

Length 346 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF2Q15853 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.05□□□□□ -1.92
USF2Q15853 AL109659.3-201ENST00000624985 950 ntBASIC3.05□□□□□ -1.92
USF2Q15853 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
USF2Q15853 AC017104.5-201ENST00000637647 639 ntBASIC3.05□□□□□ -1.92
USF2Q15853 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
USF2Q15853 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
USF2Q15853 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
USF2Q15853 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
USF2Q15853 ZNF807-201ENST00000328088 1707 ntBASIC3.05□□□□□ -1.92
USF2Q15853 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
USF2Q15853 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.04□□□□□ -1.92
USF2Q15853 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.04□□□□□ -1.92
USF2Q15853 AC009501.3-201ENST00000605001 1352 ntBASIC3.04□□□□□ -1.92
USF2Q15853 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
USF2Q15853 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.04□□□□□ -1.92
USF2Q15853 OR6C69P-201ENST00000394268 893 ntBASIC3.04□□□□□ -1.92
USF2Q15853 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.04□□□□□ -1.92
USF2Q15853 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC3.04□□□□□ -1.92
USF2Q15853 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC3.04□□□□□ -1.92
USF2Q15853 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.04□□□□□ -1.92
USF2Q15853 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.04□□□□□ -1.92
USF2Q15853 MRPL50P1-201ENST00000431951 384 ntBASIC3.04□□□□□ -1.92
USF2Q15853 SNRPEP4-201ENST00000435815 279 ntBASIC3.04□□□□□ -1.92
USF2Q15853 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.04□□□□□ -1.92
USF2Q15853 FTH1P1-201ENST00000437933 532 ntBASIC3.04□□□□□ -1.92
USF2Q15853 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.04□□□□□ -1.92
USF2Q15853 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC3.04□□□□□ -1.92
USF2Q15853 RANP8-201ENST00000444720 713 ntBASIC3.04□□□□□ -1.92
USF2Q15853 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.04□□□□□ -1.92
USF2Q15853 RPS17P13-201ENST00000448974 407 ntBASIC3.04□□□□□ -1.92
USF2Q15853 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.04□□□□□ -1.92
USF2Q15853 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC3.04□□□□□ -1.92
USF2Q15853 CYCSP20-201ENST00000473154 315 ntBASIC3.04□□□□□ -1.92
USF2Q15853 AC020898.1-201ENST00000474167 787 ntBASIC3.04□□□□□ -1.92
USF2Q15853 AC015908.1-201ENST00000478739 476 ntBASIC3.04□□□□□ -1.92
USF2Q15853 OR9N1P-202ENST00000494289 481 ntBASIC3.04□□□□□ -1.92
USF2Q15853 AC105914.1-201ENST00000511798 226 ntBASIC3.04□□□□□ -1.92
USF2Q15853 RFESD-208ENST00000513950 464 ntTSL 5 BASIC3.04□□□□□ -1.92
USF2Q15853 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.04□□□□□ -1.92
USF2Q15853 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.04□□□□□ -1.92
USF2Q15853 AP000619.3-201ENST00000535634 1127 ntBASIC3.04□□□□□ -1.92
USF2Q15853 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.04□□□□□ -1.92
USF2Q15853 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC3.04□□□□□ -1.92
USF2Q15853 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.04□□□□□ -1.92
USF2Q15853 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.04□□□□□ -1.92
USF2Q15853 AC023575.1-201ENST00000580510 358 ntBASIC3.04□□□□□ -1.92
USF2Q15853 AC005412.1-201ENST00000580812 1049 ntBASIC3.04□□□□□ -1.92
USF2Q15853 AC005242.1-201ENST00000585658 438 ntBASIC3.04□□□□□ -1.92
USF2Q15853 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
USF2Q15853 AC096947.1-201ENST00000603233 470 ntBASIC3.04□□□□□ -1.92
USF2Q15853 AC004775.1-201ENST00000607389 753 ntBASIC3.04□□□□□ -1.92
USF2Q15853 AC107294.3-201ENST00000609211 526 ntBASIC3.04□□□□□ -1.92
USF2Q15853 AL354976.1-201ENST00000613843 387 ntBASIC3.04□□□□□ -1.92
USF2Q15853 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.04□□□□□ -1.92
USF2Q15853 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
USF2Q15853 AC002076.2-201ENST00000617362 122 ntBASIC3.04□□□□□ -1.92
USF2Q15853 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.04□□□□□ -1.92
USF2Q15853 AL445567.2-201ENST00000618935 498 ntBASIC3.04□□□□□ -1.92
USF2Q15853 AC092650.2-201ENST00000619984 902 ntBASIC3.04□□□□□ -1.92
USF2Q15853 AC091905.1-201ENST00000624400 311 ntBASIC3.04□□□□□ -1.92
USF2Q15853 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.04□□□□□ -1.92
USF2Q15853 AL356118.1-201ENST00000635272 1078 ntBASIC3.04□□□□□ -1.92
USF2Q15853 AC046144.1-201ENST00000478559 1853 ntBASIC3.04□□□□□ -1.92
USF2Q15853 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
USF2Q15853 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.04□□□□□ -1.92
USF2Q15853 AC103988.1-201ENST00000566382 2177 ntBASIC3.04□□□□□ -1.92
USF2Q15853 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
USF2Q15853 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
USF2Q15853 FAM35CP-201ENST00000554755 2470 ntBASIC3.03□□□□□ -1.92
USF2Q15853 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.03□□□□□ -1.92
USF2Q15853 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
USF2Q15853 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
USF2Q15853 AC126755.2-208ENST00000327792 462 ntBASIC3.03□□□□□ -1.92
USF2Q15853 AC138969.1-213ENST00000331436 462 ntBASIC3.03□□□□□ -1.92
USF2Q15853 RNU6-1249P-201ENST00000363237 111 ntBASIC3.03□□□□□ -1.92
USF2Q15853 RN7SKP280-201ENST00000364196 304 ntBASIC3.03□□□□□ -1.92
USF2Q15853 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.03□□□□□ -1.92
USF2Q15853 RNU6-40P-201ENST00000384254 107 ntBASIC3.03□□□□□ -1.92
USF2Q15853 HLFP1-201ENST00000402375 499 ntBASIC3.03□□□□□ -1.92
USF2Q15853 RNU2-17P-201ENST00000410290 190 ntBASIC3.03□□□□□ -1.92
USF2Q15853 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC3.03□□□□□ -1.92
USF2Q15853 AC073508.1-201ENST00000428866 656 ntBASIC3.03□□□□□ -1.92
USF2Q15853 MRPS18BP2-201ENST00000434310 759 ntBASIC3.03□□□□□ -1.92
USF2Q15853 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.03□□□□□ -1.92
USF2Q15853 AL356276.2-201ENST00000435919 558 ntBASIC3.03□□□□□ -1.92
USF2Q15853 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC3.03□□□□□ -1.92
USF2Q15853 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.03□□□□□ -1.92
USF2Q15853 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
USF2Q15853 AC010618.1-201ENST00000469924 477 ntBASIC3.03□□□□□ -1.92
USF2Q15853 AC005726.1-201ENST00000494679 427 ntBASIC3.03□□□□□ -1.92
USF2Q15853 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.03□□□□□ -1.92
USF2Q15853 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.03□□□□□ -1.92
USF2Q15853 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC3.03□□□□□ -1.92
USF2Q15853 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.03□□□□□ -1.92
USF2Q15853 ERHP1-201ENST00000523006 310 ntBASIC3.03□□□□□ -1.92
USF2Q15853 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.03□□□□□ -1.92
USF2Q15853 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.03□□□□□ -1.92
USF2Q15853 CYCSP29-201ENST00000533731 318 ntBASIC3.03□□□□□ -1.92
USF2Q15853 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.03□□□□□ -1.92
USF2Q15853 AC091516.1-201ENST00000549191 703 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms