Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 AL138960.2-201ENST00000625145 535 ntBASIC4.09□□□□□ -1.75
GABPAQ06546 MIR3651-201ENST00000630427 90 ntBASIC4.09□□□□□ -1.75
GABPAQ06546 AC073073.2-201ENST00000609827 2578 ntBASIC4.09□□□□□ -1.75
GABPAQ06546 AC104446.1-201ENST00000613728 1321 ntBASIC4.09□□□□□ -1.75
GABPAQ06546 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
GABPAQ06546 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
GABPAQ06546 AC012020.1-201ENST00000624541 1728 ntBASIC4.09□□□□□ -1.76
GABPAQ06546 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.08□□□□□ -1.76
GABPAQ06546 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
GABPAQ06546 AC007390.2-201ENST00000606229 3803 ntBASIC4.08□□□□□ -1.76
GABPAQ06546 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
GABPAQ06546 MIR525-201ENST00000384978 85 ntBASIC4.08□□□□□ -1.76
GABPAQ06546 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
GABPAQ06546 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC4.08□□□□□ -1.76
GABPAQ06546 AC114814.2-201ENST00000419195 485 ntBASIC4.08□□□□□ -1.76
GABPAQ06546 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
GABPAQ06546 AC006989.1-201ENST00000427212 131 ntBASIC4.08□□□□□ -1.76
GABPAQ06546 FO393414.1-201ENST00000428697 1184 ntBASIC4.08□□□□□ -1.76
GABPAQ06546 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC4.08□□□□□ -1.76
GABPAQ06546 SKP1P1-201ENST00000438081 489 ntBASIC4.08□□□□□ -1.76
GABPAQ06546 RPS3AP12-201ENST00000443616 753 ntBASIC4.08□□□□□ -1.76
GABPAQ06546 HMGN1P5-201ENST00000448591 263 ntBASIC4.08□□□□□ -1.76
GABPAQ06546 IFNWP4-201ENST00000453148 294 ntBASIC4.08□□□□□ -1.76
GABPAQ06546 AC119744.1-201ENST00000454746 1715 ntBASIC4.08□□□□□ -1.76
GABPAQ06546 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.08□□□□□ -1.76
GABPAQ06546 RPL21P10-201ENST00000463521 490 ntBASIC4.08□□□□□ -1.76
GABPAQ06546 AC010683.1-201ENST00000473673 378 ntBASIC4.08□□□□□ -1.76
GABPAQ06546 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
GABPAQ06546 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC4.08□□□□□ -1.76
GABPAQ06546 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.08□□□□□ -1.76
GABPAQ06546 AC010306.1-201ENST00000523223 1117 ntBASIC4.08□□□□□ -1.76
GABPAQ06546 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC4.08□□□□□ -1.76
GABPAQ06546 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC4.08□□□□□ -1.76
GABPAQ06546 OR4U1P-201ENST00000554958 912 ntBASIC4.08□□□□□ -1.76
GABPAQ06546 AC095057.3-201ENST00000567102 1157 ntBASIC4.08□□□□□ -1.76
GABPAQ06546 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC4.08□□□□□ -1.76
GABPAQ06546 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC4.08□□□□□ -1.76
GABPAQ06546 NTAN1P1-201ENST00000603150 646 ntBASIC4.08□□□□□ -1.76
GABPAQ06546 AP006248.2-201ENST00000623309 592 ntBASIC4.08□□□□□ -1.76
GABPAQ06546 AC127502.3-201ENST00000636170 1206 ntBASIC4.08□□□□□ -1.76
GABPAQ06546 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
GABPAQ06546 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.08□□□□□ -1.76
GABPAQ06546 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
GABPAQ06546 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
GABPAQ06546 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.07□□□□□ -1.76
GABPAQ06546 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC4.07□□□□□ -1.76
GABPAQ06546 RNU6-1339P-201ENST00000363574 91 ntBASIC4.07□□□□□ -1.76
GABPAQ06546 MIR491-201ENST00000384877 84 ntBASIC4.07□□□□□ -1.76
GABPAQ06546 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
GABPAQ06546 RSL24D1P1-201ENST00000404972 493 ntBASIC4.07□□□□□ -1.76
GABPAQ06546 AL603766.1-201ENST00000407763 664 ntBASIC4.07□□□□□ -1.76
GABPAQ06546 RNU2-6P-201ENST00000411404 190 ntBASIC4.07□□□□□ -1.76
GABPAQ06546 BX323014.1-201ENST00000412876 237 ntBASIC4.07□□□□□ -1.76
GABPAQ06546 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC4.07□□□□□ -1.76
GABPAQ06546 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC4.07□□□□□ -1.76
GABPAQ06546 AC104978.1-201ENST00000449387 391 ntBASIC4.07□□□□□ -1.76
GABPAQ06546 DNAJC19P8-201ENST00000452887 259 ntBASIC4.07□□□□□ -1.76
GABPAQ06546 AC023050.1-201ENST00000498198 304 ntBASIC4.07□□□□□ -1.76
GABPAQ06546 CAB39P1-201ENST00000502277 460 ntBASIC4.07□□□□□ -1.76
GABPAQ06546 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.07□□□□□ -1.76
GABPAQ06546 MTCO3P27-201ENST00000514397 196 ntBASIC4.07□□□□□ -1.76
GABPAQ06546 AC008562.1-201ENST00000521763 330 ntBASIC4.07□□□□□ -1.76
GABPAQ06546 AC139103.1-201ENST00000534696 1030 ntBASIC4.07□□□□□ -1.76
GABPAQ06546 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC4.07□□□□□ -1.76
GABPAQ06546 DUXAP6-201ENST00000553858 601 ntBASIC4.07□□□□□ -1.76
GABPAQ06546 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC4.07□□□□□ -1.76
GABPAQ06546 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.07□□□□□ -1.76
GABPAQ06546 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC4.07□□□□□ -1.76
GABPAQ06546 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.07□□□□□ -1.76
GABPAQ06546 MIR8058-201ENST00000615737 89 ntBASIC4.07□□□□□ -1.76
GABPAQ06546 RMST_9.1-201ENST00000619945 193 ntBASIC4.07□□□□□ -1.76
GABPAQ06546 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.07□□□□□ -1.76
GABPAQ06546 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.07□□□□□ -1.76
GABPAQ06546 USP8P1-201ENST00000494673 3183 ntBASIC4.06□□□□□ -1.76
GABPAQ06546 AC068647.1-201ENST00000489539 2265 ntBASIC4.06□□□□□ -1.76
GABPAQ06546 NMD3P1-201ENST00000439704 1488 ntBASIC4.06□□□□□ -1.76
GABPAQ06546 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
GABPAQ06546 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
GABPAQ06546 AC022031.1-201ENST00000585985 2593 ntBASIC4.06□□□□□ -1.76
GABPAQ06546 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
GABPAQ06546 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
GABPAQ06546 RPL22P22-201ENST00000395439 379 ntBASIC4.06□□□□□ -1.76
GABPAQ06546 RPL23AP48-201ENST00000406913 488 ntBASIC4.06□□□□□ -1.76
GABPAQ06546 RWDD4P2-201ENST00000426392 563 ntBASIC4.06□□□□□ -1.76
GABPAQ06546 AL031736.2-201ENST00000426573 787 ntBASIC4.06□□□□□ -1.76
GABPAQ06546 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC4.06□□□□□ -1.76
GABPAQ06546 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC4.06□□□□□ -1.76
GABPAQ06546 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.06□□□□□ -1.76
GABPAQ06546 UBE2V1P5-201ENST00000440070 405 ntBASIC4.06□□□□□ -1.76
GABPAQ06546 ZNF736P1Y-201ENST00000440402 1276 ntBASIC4.06□□□□□ -1.76
GABPAQ06546 AL591503.2-201ENST00000442314 1005 ntBASIC4.06□□□□□ -1.76
GABPAQ06546 HSFY3P-201ENST00000444242 1191 ntBASIC4.06□□□□□ -1.76
GABPAQ06546 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.06□□□□□ -1.76
GABPAQ06546 RN7SL807P-201ENST00000470923 297 ntBASIC4.06□□□□□ -1.76
GABPAQ06546 RPS4XP6-201ENST00000477670 797 ntBASIC4.06□□□□□ -1.76
GABPAQ06546 AC073522.1-201ENST00000483312 377 ntBASIC4.06□□□□□ -1.76
GABPAQ06546 RPL30P11-201ENST00000495304 339 ntBASIC4.06□□□□□ -1.76
GABPAQ06546 SNORA74D-201ENST00000516404 141 ntBASIC4.06□□□□□ -1.76
GABPAQ06546 AC090281.1-201ENST00000523019 276 ntBASIC4.06□□□□□ -1.76
GABPAQ06546 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms