Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 SPRYD7P1-201ENST00000443861 570 ntBASIC5.22□□□□□ -1.57
YBX1P67809 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC5.22□□□□□ -1.57
YBX1P67809 AC011225.1-201ENST00000457751 369 ntBASIC5.22□□□□□ -1.57
YBX1P67809 RNU7-136P-201ENST00000458819 69 ntBASIC5.22□□□□□ -1.57
YBX1P67809 RNU6-261P-201ENST00000459506 102 ntBASIC5.22□□□□□ -1.57
YBX1P67809 RN7SL799P-201ENST00000475891 298 ntBASIC5.22□□□□□ -1.57
YBX1P67809 AC058823.1-201ENST00000485315 474 ntBASIC5.22□□□□□ -1.57
YBX1P67809 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
YBX1P67809 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC5.22□□□□□ -1.57
YBX1P67809 AC110792.2-201ENST00000510278 224 ntBASIC5.22□□□□□ -1.57
YBX1P67809 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.22□□□□□ -1.57
YBX1P67809 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC5.22□□□□□ -1.57
YBX1P67809 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.22□□□□□ -1.57
YBX1P67809 AC023050.3-201ENST00000541142 333 ntBASIC5.22□□□□□ -1.57
YBX1P67809 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.22□□□□□ -1.57
YBX1P67809 AC093012.1-202ENST00000549403 582 ntBASIC5.22□□□□□ -1.57
YBX1P67809 AC126177.5-201ENST00000549599 178 ntBASIC5.22□□□□□ -1.57
YBX1P67809 AC044860.2-201ENST00000561005 179 ntBASIC5.22□□□□□ -1.57
YBX1P67809 AC093249.1-201ENST00000567049 203 ntBASIC5.22□□□□□ -1.57
YBX1P67809 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.22□□□□□ -1.57
YBX1P67809 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.22□□□□□ -1.57
YBX1P67809 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC5.22□□□□□ -1.57
YBX1P67809 AC109583.2-201ENST00000617367 129 ntBASIC5.22□□□□□ -1.57
YBX1P67809 C2orf27A-204ENST00000623058 969 ntBASIC5.22□□□□□ -1.57
YBX1P67809 AC134503.1-201ENST00000633048 54 ntBASIC5.22□□□□□ -1.57
YBX1P67809 AC099654.6-201ENST00000636487 512 ntBASIC5.22□□□□□ -1.57
YBX1P67809 AC010149.2-201ENST00000637608 315 ntBASIC5.22□□□□□ -1.57
YBX1P67809 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
YBX1P67809 AL118496.1-201ENST00000440201 1812 ntBASIC5.22□□□□□ -1.57
YBX1P67809 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.22□□□□□ -1.57
YBX1P67809 ANKRD62P1-201ENST00000434304 1623 ntBASIC5.22□□□□□ -1.57
YBX1P67809 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.22□□□□□ -1.57
YBX1P67809 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.22□□□□□ -1.57
YBX1P67809 AP002907.1-201ENST00000606361 1430 ntBASIC5.22□□□□□ -1.57
YBX1P67809 DDX18P4-201ENST00000511690 1966 ntBASIC5.22□□□□□ -1.57
YBX1P67809 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.21□□□□□ -1.57
YBX1P67809 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.57
YBX1P67809 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
YBX1P67809 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
YBX1P67809 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.21□□□□□ -1.57
YBX1P67809 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.57
YBX1P67809 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.57
YBX1P67809 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.57
YBX1P67809 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.21□□□□□ -1.58
YBX1P67809 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
YBX1P67809 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
YBX1P67809 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
YBX1P67809 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
YBX1P67809 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC5.21□□□□□ -1.58
YBX1P67809 LINC01963-201ENST00000562038 3148 ntBASIC5.21□□□□□ -1.58
YBX1P67809 Y_RNA.422-201ENST00000384054 114 ntBASIC5.21□□□□□ -1.58
YBX1P67809 SNORD56.6-201ENST00000384569 71 ntBASIC5.21□□□□□ -1.58
YBX1P67809 NAP1L1P2-201ENST00000414182 1089 ntBASIC5.21□□□□□ -1.58
YBX1P67809 NCOR1P3-201ENST00000420479 303 ntBASIC5.21□□□□□ -1.58
YBX1P67809 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC5.21□□□□□ -1.58
YBX1P67809 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC5.21□□□□□ -1.58
YBX1P67809 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.21□□□□□ -1.58
YBX1P67809 MTND6P18-201ENST00000439477 513 ntBASIC5.21□□□□□ -1.58
YBX1P67809 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC5.21□□□□□ -1.58
YBX1P67809 AL136380.1-201ENST00000447970 162 ntBASIC5.21□□□□□ -1.58
YBX1P67809 AL672138.1-201ENST00000450604 1015 ntBASIC5.21□□□□□ -1.58
YBX1P67809 AC022431.1-201ENST00000450941 438 ntBASIC5.21□□□□□ -1.58
YBX1P67809 AC130509.1-201ENST00000464158 433 ntBASIC5.21□□□□□ -1.58
YBX1P67809 AL133445.1-201ENST00000467051 452 ntBASIC5.21□□□□□ -1.58
YBX1P67809 RN7SL188P-201ENST00000469842 285 ntBASIC5.21□□□□□ -1.58
YBX1P67809 RN7SL860P-201ENST00000473738 223 ntBASIC5.21□□□□□ -1.58
YBX1P67809 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
YBX1P67809 PGAM1P13-201ENST00000507497 754 ntBASIC5.21□□□□□ -1.58
YBX1P67809 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.21□□□□□ -1.58
YBX1P67809 HMGN1P9-201ENST00000515212 298 ntBASIC5.21□□□□□ -1.58
YBX1P67809 LY96-202ENST00000518893 430 ntTSL 3 BASIC5.21□□□□□ -1.58
YBX1P67809 BTF3P12-201ENST00000519620 469 ntBASIC5.21□□□□□ -1.58
YBX1P67809 AC107953.1-201ENST00000522216 297 ntBASIC5.21□□□□□ -1.58
YBX1P67809 AF279873.1-201ENST00000523393 313 ntBASIC5.21□□□□□ -1.58
YBX1P67809 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC5.21□□□□□ -1.58
YBX1P67809 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC5.21□□□□□ -1.58
YBX1P67809 ARL1-211ENST00000551828 776 ntTSL 5 BASIC5.21□□□□□ -1.58
YBX1P67809 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.21□□□□□ -1.58
YBX1P67809 MIR7853-201ENST00000584820 132 ntBASIC5.21□□□□□ -1.58
YBX1P67809 VN1R84P-201ENST00000593697 235 ntBASIC5.21□□□□□ -1.58
YBX1P67809 AC124312.5-201ENST00000604451 268 ntBASIC5.21□□□□□ -1.58
YBX1P67809 AC115621.1-201ENST00000604653 858 ntBASIC5.21□□□□□ -1.58
YBX1P67809 RNU6ATAC35P-201ENST00000609276 444 ntBASIC5.21□□□□□ -1.58
YBX1P67809 MIR6748-201ENST00000610433 71 ntBASIC5.21□□□□□ -1.58
YBX1P67809 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC5.21□□□□□ -1.58
YBX1P67809 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.21□□□□□ -1.58
YBX1P67809 AC068831.8-201ENST00000620171 435 ntBASIC5.21□□□□□ -1.58
YBX1P67809 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC5.21□□□□□ -1.58
YBX1P67809 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
YBX1P67809 ERCC6-202ENST00000374127 1782 ntBASIC5.21□□□□□ -1.58
YBX1P67809 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.21□□□□□ -1.58
YBX1P67809 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.21□□□□□ -1.58
YBX1P67809 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
YBX1P67809 ACTR3BP2-202ENST00000623630 1338 ntBASIC5.21□□□□□ -1.58
YBX1P67809 AL137141.1-201ENST00000624622 4836 ntBASIC5.21□□□□□ -1.58
YBX1P67809 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
YBX1P67809 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
YBX1P67809 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.2□□□□□ -1.58
YBX1P67809 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
YBX1P67809 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms