Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 RPL34P26-201ENST00000445636 354 ntBASIC3□□□□□ -1.93
LSM6P62312 RPL21P23-201ENST00000446654 460 ntBASIC3□□□□□ -1.93
LSM6P62312 SSXP4-201ENST00000451349 245 ntBASIC3□□□□□ -1.93
LSM6P62312 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3□□□□□ -1.93
LSM6P62312 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC3□□□□□ -1.93
LSM6P62312 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3□□□□□ -1.93
LSM6P62312 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3□□□□□ -1.93
LSM6P62312 AC112198.1-201ENST00000505369 1220 ntBASIC3□□□□□ -1.93
LSM6P62312 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3□□□□□ -1.93
LSM6P62312 FCF1P8-201ENST00000510322 597 ntBASIC3□□□□□ -1.93
LSM6P62312 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3□□□□□ -1.93
LSM6P62312 HMGN1P15-201ENST00000513870 295 ntBASIC3□□□□□ -1.93
LSM6P62312 MTCO2P32-201ENST00000514865 403 ntBASIC3□□□□□ -1.93
LSM6P62312 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3□□□□□ -1.93
LSM6P62312 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC3□□□□□ -1.93
LSM6P62312 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3□□□□□ -1.93
LSM6P62312 ZNF92P3-201ENST00000596594 954 ntBASIC3□□□□□ -1.93
LSM6P62312 AL451074.6-201ENST00000608512 729 ntBASIC3□□□□□ -1.93
LSM6P62312 AC135803.1-201ENST00000608748 565 ntBASIC3□□□□□ -1.93
LSM6P62312 AL731566.2-201ENST00000618971 317 ntBASIC3□□□□□ -1.93
LSM6P62312 AC243312.2-201ENST00000623340 601 ntBASIC3□□□□□ -1.93
LSM6P62312 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3□□□□□ -1.93
LSM6P62312 AC244258.1-201ENST00000637553 1071 ntBASIC3□□□□□ -1.93
LSM6P62312 AC004925.1-201ENST00000624256 2706 ntBASIC3□□□□□ -1.93
LSM6P62312 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3□□□□□ -1.93
LSM6P62312 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3□□□□□ -1.93
LSM6P62312 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3□□□□□ -1.93
LSM6P62312 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3□□□□□ -1.93
LSM6P62312 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3□□□□□ -1.93
LSM6P62312 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3□□□□□ -1.93
LSM6P62312 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC2.99□□□□□ -1.93
LSM6P62312 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC2.99□□□□□ -1.93
LSM6P62312 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
LSM6P62312 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
LSM6P62312 AL645937.1-201ENST00000641739 1652 ntBASIC2.99□□□□□ -1.93
LSM6P62312 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
LSM6P62312 RNU6-805P-201ENST00000365643 106 ntBASIC2.99□□□□□ -1.93
LSM6P62312 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
LSM6P62312 AP002088.1-201ENST00000382740 395 ntBASIC2.99□□□□□ -1.93
LSM6P62312 MIR554-201ENST00000384874 96 ntBASIC2.99□□□□□ -1.93
LSM6P62312 AL138880.1-201ENST00000405824 642 ntBASIC2.99□□□□□ -1.93
LSM6P62312 AC093578.1-201ENST00000415219 368 ntBASIC2.99□□□□□ -1.93
LSM6P62312 AL356968.1-201ENST00000416622 474 ntBASIC2.99□□□□□ -1.93
LSM6P62312 RPL21P66-201ENST00000426566 466 ntBASIC2.99□□□□□ -1.93
LSM6P62312 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC2.99□□□□□ -1.93
LSM6P62312 OR51AB1P-201ENST00000429046 620 ntBASIC2.99□□□□□ -1.93
LSM6P62312 AC073063.1-201ENST00000434352 607 ntBASIC2.99□□□□□ -1.93
LSM6P62312 HSPD1P21-201ENST00000436541 245 ntBASIC2.99□□□□□ -1.93
LSM6P62312 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC2.99□□□□□ -1.93
LSM6P62312 HIGD1AP11-201ENST00000438361 280 ntBASIC2.99□□□□□ -1.93
LSM6P62312 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
LSM6P62312 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC2.99□□□□□ -1.93
LSM6P62312 RPL7P5-201ENST00000471472 736 ntBASIC2.99□□□□□ -1.93
LSM6P62312 HMGB1P38-201ENST00000490557 577 ntBASIC2.99□□□□□ -1.93
LSM6P62312 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC2.99□□□□□ -1.93
LSM6P62312 POU5F1P7-201ENST00000508759 541 ntBASIC2.99□□□□□ -1.93
LSM6P62312 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC2.99□□□□□ -1.93
LSM6P62312 TRMT10BP1-201ENST00000519377 943 ntBASIC2.99□□□□□ -1.93
LSM6P62312 AF279873.1-201ENST00000523393 313 ntBASIC2.99□□□□□ -1.93
LSM6P62312 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC2.99□□□□□ -1.93
LSM6P62312 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
LSM6P62312 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC2.99□□□□□ -1.93
LSM6P62312 AP003717.3-201ENST00000544832 1180 ntBASIC2.99□□□□□ -1.93
LSM6P62312 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC2.99□□□□□ -1.93
LSM6P62312 NACA-211ENST00000548563 827 ntTSL 5 BASIC2.99□□□□□ -1.93
LSM6P62312 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC2.99□□□□□ -1.93
LSM6P62312 OR4H12P-201ENST00000556269 907 ntBASIC2.99□□□□□ -1.93
LSM6P62312 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC2.99□□□□□ -1.93
LSM6P62312 AC067852.3-201ENST00000589177 561 ntBASIC2.99□□□□□ -1.93
LSM6P62312 ACTR3BP1-201ENST00000605584 1247 ntBASIC2.99□□□□□ -1.93
LSM6P62312 AC012557.1-201ENST00000607115 611 ntBASIC2.99□□□□□ -1.93
LSM6P62312 U6.48-201ENST00000618523 106 ntBASIC2.99□□□□□ -1.93
LSM6P62312 CR392039.5-201ENST00000623201 510 ntBASIC2.99□□□□□ -1.93
LSM6P62312 AL034408.1-202ENST00000636088 415 ntBASIC2.99□□□□□ -1.93
LSM6P62312 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC2.99□□□□□ -1.93
LSM6P62312 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
LSM6P62312 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC2.99□□□□□ -1.93
LSM6P62312 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC2.99□□□□□ -1.93
LSM6P62312 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
LSM6P62312 HSPA8P19-201ENST00000505359 1517 ntBASIC2.98□□□□□ -1.93
LSM6P62312 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
LSM6P62312 TTN-204ENST00000360870 18218 ntTSL 5 BASIC2.98□□□□□ -1.93
LSM6P62312 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC2.98□□□□□ -1.93
LSM6P62312 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC2.98□□□□□ -1.93
LSM6P62312 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
LSM6P62312 MIR218-2-201ENST00000385006 110 ntBASIC2.98□□□□□ -1.93
LSM6P62312 SNORD17-201ENST00000390930 237 ntBASIC2.98□□□□□ -1.93
LSM6P62312 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC2.98□□□□□ -1.93
LSM6P62312 SKINT1L-201ENST00000401057 817 ntBASIC2.98□□□□□ -1.93
LSM6P62312 PVALB-202ENST00000404171 422 ntTSL 2 BASIC2.98□□□□□ -1.93
LSM6P62312 MIR1250-201ENST00000408098 113 ntBASIC2.98□□□□□ -1.93
LSM6P62312 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC2.98□□□□□ -1.93
LSM6P62312 RNA5SP31-201ENST00000411144 127 ntBASIC2.98□□□□□ -1.93
LSM6P62312 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC2.98□□□□□ -1.93
LSM6P62312 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC2.98□□□□□ -1.93
LSM6P62312 AC012065.2-201ENST00000421295 375 ntBASIC2.98□□□□□ -1.93
LSM6P62312 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC2.98□□□□□ -1.93
LSM6P62312 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
LSM6P62312 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC2.98□□□□□ -1.93
LSM6P62312 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 130.7 ms