Protein–RNA interactions for Protein: P55318

FOXA3, Hepatocyte nuclear factor 3-gamma, humanhuman

Predicted RBP Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3P55318 AC245128.3-201ENST00000594721 748 ntBASIC2.4□□□□□ -2.03
FOXA3P55318 SNRPGP15-201ENST00000600149 222 ntBASIC2.4□□□□□ -2.03
FOXA3P55318 AC112230.1-201ENST00000604342 547 ntBASIC2.4□□□□□ -2.03
FOXA3P55318 AC069234.5-201ENST00000611056 416 ntBASIC2.4□□□□□ -2.03
FOXA3P55318 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
FOXA3P55318 AC007342.8-201ENST00000623278 678 ntBASIC2.4□□□□□ -2.03
FOXA3P55318 AC090617.7-201ENST00000623952 126 ntBASIC2.4□□□□□ -2.03
FOXA3P55318 AC127502.3-201ENST00000636170 1206 ntBASIC2.4□□□□□ -2.03
FOXA3P55318 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC2.4□□□□□ -2.03
FOXA3P55318 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
FOXA3P55318 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.4□□□□□ -2.03
FOXA3P55318 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC2.4□□□□□ -2.03
FOXA3P55318 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
FOXA3P55318 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC2.4□□□□□ -2.03
FOXA3P55318 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
FOXA3P55318 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.39□□□□□ -2.03
FOXA3P55318 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.39□□□□□ -2.03
FOXA3P55318 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC2.39□□□□□ -2.03
FOXA3P55318 U8.11-201ENST00000384699 133 ntBASIC2.39□□□□□ -2.03
FOXA3P55318 U8.12-201ENST00000384701 133 ntBASIC2.39□□□□□ -2.03
FOXA3P55318 AC007066.1-201ENST00000392902 381 ntBASIC2.39□□□□□ -2.03
FOXA3P55318 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.39□□□□□ -2.03
FOXA3P55318 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC2.39□□□□□ -2.03
FOXA3P55318 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.39□□□□□ -2.03
FOXA3P55318 AL390023.1-201ENST00000428836 262 ntBASIC2.39□□□□□ -2.03
FOXA3P55318 YWHAZP7-201ENST00000436906 631 ntBASIC2.39□□□□□ -2.03
FOXA3P55318 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC2.39□□□□□ -2.03
FOXA3P55318 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC2.39□□□□□ -2.03
FOXA3P55318 U8.18-201ENST00000459285 133 ntBASIC2.39□□□□□ -2.03
FOXA3P55318 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC2.39□□□□□ -2.03
FOXA3P55318 RPL5P24-201ENST00000463742 885 ntBASIC2.39□□□□□ -2.03
FOXA3P55318 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC2.39□□□□□ -2.03
FOXA3P55318 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
FOXA3P55318 RNU6-711P-201ENST00000517255 106 ntBASIC2.39□□□□□ -2.03
FOXA3P55318 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC2.39□□□□□ -2.03
FOXA3P55318 MTCYBP41-201ENST00000528913 1123 ntBASIC2.39□□□□□ -2.03
FOXA3P55318 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC2.39□□□□□ -2.03
FOXA3P55318 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC2.39□□□□□ -2.03
FOXA3P55318 PARP1P2-201ENST00000556806 195 ntBASIC2.39□□□□□ -2.03
FOXA3P55318 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.39□□□□□ -2.03
FOXA3P55318 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC2.39□□□□□ -2.03
FOXA3P55318 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC2.39□□□□□ -2.03
FOXA3P55318 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC2.39□□□□□ -2.03
FOXA3P55318 AC010591.1-201ENST00000603941 649 ntBASIC2.39□□□□□ -2.03
FOXA3P55318 AL392112.1-201ENST00000605115 829 ntBASIC2.39□□□□□ -2.03
FOXA3P55318 MIR6830-201ENST00000636015 70 ntBASIC2.39□□□□□ -2.03
FOXA3P55318 LRRC77P-213ENST00000637727 880 ntBASIC2.39□□□□□ -2.03
FOXA3P55318 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
FOXA3P55318 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.39□□□□□ -2.03
FOXA3P55318 MTCO1P24-201ENST00000515438 1558 ntBASIC2.39□□□□□ -2.03
FOXA3P55318 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
FOXA3P55318 CNOT6LP1-201ENST00000559681 1462 ntBASIC2.39□□□□□ -2.03
FOXA3P55318 AC073055.1-201ENST00000456901 1621 ntBASIC2.39□□□□□ -2.03
FOXA3P55318 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC2.38□□□□□ -2.03
FOXA3P55318 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
FOXA3P55318 AC126755.2-208ENST00000327792 462 ntBASIC2.38□□□□□ -2.03
FOXA3P55318 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
FOXA3P55318 AC138969.1-213ENST00000331436 462 ntBASIC2.38□□□□□ -2.03
FOXA3P55318 U8.9-201ENST00000365667 134 ntBASIC2.38□□□□□ -2.03
FOXA3P55318 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
FOXA3P55318 ESD-201ENST00000378697 1079 ntTSL 5 BASIC2.38□□□□□ -2.03
FOXA3P55318 SMC4P1-201ENST00000414479 527 ntBASIC2.38□□□□□ -2.03
FOXA3P55318 RFESDP1-201ENST00000422350 461 ntBASIC2.38□□□□□ -2.03
FOXA3P55318 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC2.38□□□□□ -2.03
FOXA3P55318 RPS29P7-201ENST00000439662 171 ntBASIC2.38□□□□□ -2.03
FOXA3P55318 AC140076.1-201ENST00000449897 361 ntBASIC2.38□□□□□ -2.03
FOXA3P55318 ELOCP23-201ENST00000452014 332 ntBASIC2.38□□□□□ -2.03
FOXA3P55318 AC114982.2-201ENST00000461396 358 ntBASIC2.38□□□□□ -2.03
FOXA3P55318 AC025518.1-201ENST00000479856 347 ntBASIC2.38□□□□□ -2.03
FOXA3P55318 MTCO3P35-201ENST00000485582 781 ntBASIC2.38□□□□□ -2.03
FOXA3P55318 VN1R105P-201ENST00000486595 910 ntBASIC2.38□□□□□ -2.03
FOXA3P55318 RPL7P23-201ENST00000493874 747 ntBASIC2.38□□□□□ -2.03
FOXA3P55318 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.38□□□□□ -2.03
FOXA3P55318 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC2.38□□□□□ -2.03
FOXA3P55318 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
FOXA3P55318 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC2.38□□□□□ -2.03
FOXA3P55318 AC007536.1-201ENST00000533382 349 ntBASIC2.38□□□□□ -2.03
FOXA3P55318 CD69-203ENST00000536709 1020 ntTSL 2 BASIC2.38□□□□□ -2.03
FOXA3P55318 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC2.38□□□□□ -2.03
FOXA3P55318 AGGF1P6-201ENST00000569213 976 ntBASIC2.38□□□□□ -2.03
FOXA3P55318 MTND4LP24-201ENST00000572277 291 ntBASIC2.38□□□□□ -2.03
FOXA3P55318 RN7SL703P-201ENST00000578485 302 ntBASIC2.38□□□□□ -2.03
FOXA3P55318 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC2.38□□□□□ -2.03
FOXA3P55318 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC2.38□□□□□ -2.03
FOXA3P55318 ACTR3BP1-201ENST00000605584 1247 ntBASIC2.38□□□□□ -2.03
FOXA3P55318 HMGN2P28-201ENST00000606102 262 ntBASIC2.38□□□□□ -2.03
FOXA3P55318 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC2.38□□□□□ -2.03
FOXA3P55318 AC231759.1-201ENST00000616455 597 ntBASIC2.38□□□□□ -2.03
FOXA3P55318 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC2.38□□□□□ -2.03
FOXA3P55318 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.38□□□□□ -2.03
FOXA3P55318 MIR4496-201ENST00000635896 61 ntBASIC2.38□□□□□ -2.03
FOXA3P55318 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC2.38□□□□□ -2.03
FOXA3P55318 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
FOXA3P55318 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
FOXA3P55318 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
FOXA3P55318 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
FOXA3P55318 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
FOXA3P55318 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
FOXA3P55318 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.37□□□□□ -2.03
FOXA3P55318 AL359715.4-201ENST00000606629 1436 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms