Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 HMGN3P1-201ENST00000453847 193 ntBASIC4.16□□□□□ -1.74
LIMK1P53667 RPL23AP81-201ENST00000455252 467 ntBASIC4.16□□□□□ -1.74
LIMK1P53667 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.16□□□□□ -1.74
LIMK1P53667 UBTFL6-201ENST00000477929 1024 ntBASIC4.16□□□□□ -1.74
LIMK1P53667 AC069528.1-202ENST00000482888 637 ntBASIC4.16□□□□□ -1.74
LIMK1P53667 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.16□□□□□ -1.74
LIMK1P53667 DYNLL1P6-201ENST00000503440 264 ntBASIC4.16□□□□□ -1.74
LIMK1P53667 DEFB130C-202ENST00000530001 230 ntBASIC4.16□□□□□ -1.74
LIMK1P53667 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.16□□□□□ -1.74
LIMK1P53667 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC4.16□□□□□ -1.74
LIMK1P53667 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
LIMK1P53667 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.16□□□□□ -1.74
LIMK1P53667 ZNF192P1-203ENST00000565888 810 ntBASIC4.16□□□□□ -1.74
LIMK1P53667 MIR5708-201ENST00000579723 85 ntBASIC4.16□□□□□ -1.74
LIMK1P53667 U73479.1-201ENST00000618062 168 ntBASIC4.16□□□□□ -1.74
LIMK1P53667 AC015967.1-201ENST00000619893 476 ntBASIC4.16□□□□□ -1.74
LIMK1P53667 MIR4727-201ENST00000622232 55 ntBASIC4.16□□□□□ -1.74
LIMK1P53667 MIR6500-201ENST00000622700 86 ntBASIC4.16□□□□□ -1.74
LIMK1P53667 AC124312.6-202ENST00000623624 418 ntBASIC4.16□□□□□ -1.74
LIMK1P53667 AC087821.2-201ENST00000637086 450 ntBASIC4.16□□□□□ -1.74
LIMK1P53667 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
LIMK1P53667 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.16□□□□□ -1.74
LIMK1P53667 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
LIMK1P53667 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.16□□□□□ -1.74
LIMK1P53667 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.16□□□□□ -1.74
LIMK1P53667 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
LIMK1P53667 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.16□□□□□ -1.74
LIMK1P53667 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
LIMK1P53667 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
LIMK1P53667 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.16□□□□□ -1.74
LIMK1P53667 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.15□□□□□ -1.74
LIMK1P53667 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
LIMK1P53667 AC139713.2-215ENST00000641428 5037 ntBASIC4.15□□□□□ -1.74
LIMK1P53667 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
LIMK1P53667 AC139769.1-204ENST00000472297 1931 ntBASIC4.15□□□□□ -1.74
LIMK1P53667 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
LIMK1P53667 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.15□□□□□ -1.74
LIMK1P53667 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.74
LIMK1P53667 FAM91A3P-201ENST00000456826 2544 ntBASIC4.15□□□□□ -1.74
LIMK1P53667 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
LIMK1P53667 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
LIMK1P53667 SNORD74.4-201ENST00000364129 80 ntBASIC4.15□□□□□ -1.75
LIMK1P53667 RNU11-4P-201ENST00000391149 133 ntBASIC4.15□□□□□ -1.75
LIMK1P53667 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.15□□□□□ -1.75
LIMK1P53667 EIF1P3-201ENST00000423841 334 ntBASIC4.15□□□□□ -1.75
LIMK1P53667 HSFY1P1-201ENST00000423928 1178 ntBASIC4.15□□□□□ -1.75
LIMK1P53667 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.15□□□□□ -1.75
LIMK1P53667 C1DP1-201ENST00000426049 402 ntBASIC4.15□□□□□ -1.75
LIMK1P53667 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC4.15□□□□□ -1.75
LIMK1P53667 CYCSP43-201ENST00000438233 310 ntBASIC4.15□□□□□ -1.75
LIMK1P53667 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.15□□□□□ -1.75
LIMK1P53667 Z99714.1-201ENST00000450463 807 ntBASIC4.15□□□□□ -1.75
LIMK1P53667 NDUFA5P7-201ENST00000452914 242 ntBASIC4.15□□□□□ -1.75
LIMK1P53667 RPL7P9-201ENST00000468715 747 ntBASIC4.15□□□□□ -1.75
LIMK1P53667 NCOR1P1-202ENST00000486162 291 ntBASIC4.15□□□□□ -1.75
LIMK1P53667 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.15□□□□□ -1.75
LIMK1P53667 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC4.15□□□□□ -1.75
LIMK1P53667 AC026427.2-201ENST00000506228 536 ntBASIC4.15□□□□□ -1.75
LIMK1P53667 GMPSP1-201ENST00000514075 579 ntBASIC4.15□□□□□ -1.75
LIMK1P53667 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.15□□□□□ -1.75
LIMK1P53667 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.15□□□□□ -1.75
LIMK1P53667 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
LIMK1P53667 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.15□□□□□ -1.75
LIMK1P53667 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.15□□□□□ -1.75
LIMK1P53667 BNIP3P40-201ENST00000596017 556 ntBASIC4.15□□□□□ -1.75
LIMK1P53667 AP003973.1-201ENST00000604639 691 ntBASIC4.15□□□□□ -1.75
LIMK1P53667 HSPE1P14-201ENST00000605812 302 ntBASIC4.15□□□□□ -1.75
LIMK1P53667 AC103710.3-201ENST00000608157 948 ntBASIC4.15□□□□□ -1.75
LIMK1P53667 AP005137.2-201ENST00000609238 400 ntBASIC4.15□□□□□ -1.75
LIMK1P53667 AL031666.3-201ENST00000609320 1006 ntBASIC4.15□□□□□ -1.75
LIMK1P53667 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC4.15□□□□□ -1.75
LIMK1P53667 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
LIMK1P53667 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
LIMK1P53667 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.15□□□□□ -1.75
LIMK1P53667 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.15□□□□□ -1.75
LIMK1P53667 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
LIMK1P53667 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
LIMK1P53667 AF127577.6-201ENST00000623352 2191 ntBASIC4.14□□□□□ -1.75
LIMK1P53667 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.14□□□□□ -1.75
LIMK1P53667 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
LIMK1P53667 OR11H4-201ENST00000315409 1082 ntBASIC4.14□□□□□ -1.75
LIMK1P53667 AC067945.1-201ENST00000342609 618 ntBASIC4.14□□□□□ -1.75
LIMK1P53667 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.14□□□□□ -1.75
LIMK1P53667 RNA5SP72-201ENST00000364442 117 ntBASIC4.14□□□□□ -1.75
LIMK1P53667 MIR607-201ENST00000385241 96 ntBASIC4.14□□□□□ -1.75
LIMK1P53667 MIR513A2-201ENST00000385249 127 ntBASIC4.14□□□□□ -1.75
LIMK1P53667 AL583835.1-201ENST00000399570 407 ntBASIC4.14□□□□□ -1.75
LIMK1P53667 ZNF602P-201ENST00000405929 924 ntBASIC4.14□□□□□ -1.75
LIMK1P53667 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC4.14□□□□□ -1.75
LIMK1P53667 SNORA57.3-201ENST00000411095 141 ntBASIC4.14□□□□□ -1.75
LIMK1P53667 AC069218.2-201ENST00000411665 344 ntBASIC4.14□□□□□ -1.75
LIMK1P53667 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC4.14□□□□□ -1.75
LIMK1P53667 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC4.14□□□□□ -1.75
LIMK1P53667 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
LIMK1P53667 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC4.14□□□□□ -1.75
LIMK1P53667 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
LIMK1P53667 UBE2V1P1-201ENST00000430836 445 ntBASIC4.14□□□□□ -1.75
LIMK1P53667 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.14□□□□□ -1.75
LIMK1P53667 RPL7P28-201ENST00000437739 740 ntBASIC4.14□□□□□ -1.75
LIMK1P53667 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 136.1 ms