Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC3.55□□□□□ -1.84
NUP98P52948 AC106901.1-201ENST00000425086 698 ntBASIC3.55□□□□□ -1.84
NUP98P52948 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.55□□□□□ -1.84
NUP98P52948 PTP4A1P3-201ENST00000433661 420 ntBASIC3.55□□□□□ -1.84
NUP98P52948 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC3.55□□□□□ -1.84
NUP98P52948 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.55□□□□□ -1.84
NUP98P52948 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.55□□□□□ -1.84
NUP98P52948 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC3.55□□□□□ -1.84
NUP98P52948 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
NUP98P52948 AC138761.3-201ENST00000579993 334 ntBASIC3.55□□□□□ -1.84
NUP98P52948 RPL12P50-201ENST00000603116 116 ntBASIC3.55□□□□□ -1.84
NUP98P52948 AP004607.9-201ENST00000618202 316 ntBASIC3.55□□□□□ -1.84
NUP98P52948 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
NUP98P52948 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
NUP98P52948 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
NUP98P52948 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
NUP98P52948 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
NUP98P52948 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
NUP98P52948 FTLP6-201ENST00000355274 422 ntBASIC3.54□□□□□ -1.84
NUP98P52948 RN7SKP58-201ENST00000411010 305 ntBASIC3.54□□□□□ -1.84
NUP98P52948 BTF3P9-201ENST00000418784 283 ntBASIC3.54□□□□□ -1.84
NUP98P52948 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.54□□□□□ -1.84
NUP98P52948 RPL23AP4-201ENST00000427757 463 ntBASIC3.54□□□□□ -1.84
NUP98P52948 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC3.54□□□□□ -1.84
NUP98P52948 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC3.54□□□□□ -1.84
NUP98P52948 THAP12P8-201ENST00000447914 2115 ntBASIC3.54□□□□□ -1.84
NUP98P52948 RPS3P1-201ENST00000456781 192 ntBASIC3.54□□□□□ -1.84
NUP98P52948 AC105918.1-201ENST00000474399 838 ntBASIC3.54□□□□□ -1.84
NUP98P52948 RPL31P13-201ENST00000484151 370 ntBASIC3.54□□□□□ -1.84
NUP98P52948 OR9N1P-201ENST00000491296 333 ntBASIC3.54□□□□□ -1.84
NUP98P52948 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC3.54□□□□□ -1.84
NUP98P52948 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC3.54□□□□□ -1.84
NUP98P52948 AL355493.4-201ENST00000618530 292 ntBASIC3.54□□□□□ -1.84
NUP98P52948 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC3.54□□□□□ -1.84
NUP98P52948 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
NUP98P52948 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.54□□□□□ -1.84
NUP98P52948 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
NUP98P52948 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
NUP98P52948 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
NUP98P52948 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.54□□□□□ -1.84
NUP98P52948 TOPORSLP1-201ENST00000467693 2102 ntBASIC3.54□□□□□ -1.84
NUP98P52948 AL034379.1-201ENST00000423216 253 ntBASIC3.54□□□□□ -1.84
NUP98P52948 MTCO1P51-201ENST00000427672 1060 ntBASIC3.54□□□□□ -1.84
NUP98P52948 NAP1L4P3-201ENST00000432820 1147 ntBASIC3.54□□□□□ -1.84
NUP98P52948 MTCO1P52-201ENST00000433928 531 ntBASIC3.54□□□□□ -1.84
NUP98P52948 AC004801.2-202ENST00000463559 283 ntBASIC3.54□□□□□ -1.84
NUP98P52948 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.54□□□□□ -1.84
NUP98P52948 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.54□□□□□ -1.84
NUP98P52948 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
NUP98P52948 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
NUP98P52948 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.53□□□□□ -1.84
NUP98P52948 SNORA67.4-201ENST00000384688 142 ntBASIC3.53□□□□□ -1.84
NUP98P52948 RN7SKP285-201ENST00000410137 318 ntBASIC3.53□□□□□ -1.84
NUP98P52948 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC3.53□□□□□ -1.84
NUP98P52948 AC073508.1-201ENST00000428866 656 ntBASIC3.53□□□□□ -1.84
NUP98P52948 SLC31A1P1-201ENST00000451221 567 ntBASIC3.53□□□□□ -1.84
NUP98P52948 AC126121.1-201ENST00000482313 553 ntBASIC3.53□□□□□ -1.84
NUP98P52948 AP001025.2-201ENST00000490908 477 ntBASIC3.53□□□□□ -1.84
NUP98P52948 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.53□□□□□ -1.84
NUP98P52948 IGLVIV-53-201ENST00000520107 367 ntBASIC3.53□□□□□ -1.84
NUP98P52948 AC107016.2-201ENST00000547968 190 ntBASIC3.53□□□□□ -1.84
NUP98P52948 AP000919.1-202ENST00000581139 1264 ntBASIC3.53□□□□□ -1.84
NUP98P52948 IGHVIII-44-202ENST00000636235 289 ntBASIC3.53□□□□□ -1.84
NUP98P52948 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC3.53□□□□□ -1.84
NUP98P52948 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.53□□□□□ -1.84
NUP98P52948 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.52□□□□□ -1.85
NUP98P52948 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
NUP98P52948 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
NUP98P52948 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
NUP98P52948 RNA5SP126-201ENST00000365092 109 ntBASIC3.52□□□□□ -1.85
NUP98P52948 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
NUP98P52948 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
NUP98P52948 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.52□□□□□ -1.85
NUP98P52948 AL138827.1-201ENST00000402666 306 ntBASIC3.52□□□□□ -1.85
NUP98P52948 AC245054.2-201ENST00000415639 319 ntBASIC3.52□□□□□ -1.85
NUP98P52948 AC245291.1-201ENST00000419501 328 ntBASIC3.52□□□□□ -1.85
NUP98P52948 AC073069.1-201ENST00000428657 441 ntBASIC3.52□□□□□ -1.85
NUP98P52948 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.52□□□□□ -1.85
NUP98P52948 AP000936.2-201ENST00000447151 681 ntBASIC3.52□□□□□ -1.85
NUP98P52948 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC3.52□□□□□ -1.85
NUP98P52948 RPS27AP18-201ENST00000515536 459 ntBASIC3.52□□□□□ -1.85
NUP98P52948 RNU1-41P-201ENST00000516161 162 ntBASIC3.52□□□□□ -1.85
NUP98P52948 RNU1-48P-201ENST00000516400 162 ntBASIC3.52□□□□□ -1.85
NUP98P52948 AC027176.1-201ENST00000560204 514 ntBASIC3.52□□□□□ -1.85
NUP98P52948 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC3.52□□□□□ -1.85
NUP98P52948 MIR3124-201ENST00000582636 67 ntBASIC3.52□□□□□ -1.85
NUP98P52948 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC3.52□□□□□ -1.85
NUP98P52948 AP001005.3-201ENST00000622049 129 ntBASIC3.52□□□□□ -1.85
NUP98P52948 AC004944.1-201ENST00000517807 3059 ntBASIC3.52□□□□□ -1.85
NUP98P52948 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
NUP98P52948 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
NUP98P52948 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
NUP98P52948 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
NUP98P52948 AL139095.1-201ENST00000404326 391 ntBASIC3.51□□□□□ -1.85
NUP98P52948 AL138878.1-201ENST00000405131 347 ntBASIC3.51□□□□□ -1.85
NUP98P52948 AC003982.1-202ENST00000469928 248 ntBASIC3.51□□□□□ -1.85
NUP98P52948 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.51□□□□□ -1.85
NUP98P52948 SRIP1-201ENST00000489235 288 ntBASIC3.51□□□□□ -1.85
NUP98P52948 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.51□□□□□ -1.85
NUP98P52948 RNU4-29P-201ENST00000515943 174 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms