Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AL365396.1-201ENST00000430854 671 ntBASIC4.78□□□□□ -1.64
NEK3P51956 UBE2D3P1-201ENST00000436669 444 ntBASIC4.78□□□□□ -1.64
NEK3P51956 AC073587.1-201ENST00000447093 876 ntBASIC4.78□□□□□ -1.64
NEK3P51956 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.78□□□□□ -1.64
NEK3P51956 HMGB3P30-201ENST00000457863 606 ntBASIC4.78□□□□□ -1.64
NEK3P51956 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
NEK3P51956 AP001992.1-205ENST00000462248 379 ntBASIC4.78□□□□□ -1.64
NEK3P51956 RPL7P1-201ENST00000468161 747 ntBASIC4.78□□□□□ -1.64
NEK3P51956 RPL7P9-201ENST00000468715 747 ntBASIC4.78□□□□□ -1.64
NEK3P51956 RPL31P50-201ENST00000471002 296 ntBASIC4.78□□□□□ -1.64
NEK3P51956 RPL12P20-201ENST00000475538 479 ntBASIC4.78□□□□□ -1.64
NEK3P51956 RPL30P6-201ENST00000475925 342 ntBASIC4.78□□□□□ -1.64
NEK3P51956 RPL5P23-201ENST00000496040 868 ntBASIC4.78□□□□□ -1.64
NEK3P51956 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
NEK3P51956 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.78□□□□□ -1.64
NEK3P51956 RPF2P2-201ENST00000504693 896 ntBASIC4.78□□□□□ -1.64
NEK3P51956 AC024589.1-201ENST00000512207 263 ntBASIC4.78□□□□□ -1.64
NEK3P51956 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC4.78□□□□□ -1.64
NEK3P51956 Vault.1-201ENST00000516474 102 ntBASIC4.78□□□□□ -1.64
NEK3P51956 RNA5SP360-201ENST00000516555 118 ntBASIC4.78□□□□□ -1.64
NEK3P51956 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.78□□□□□ -1.64
NEK3P51956 COX6CP8-201ENST00000522620 226 ntBASIC4.78□□□□□ -1.64
NEK3P51956 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC4.78□□□□□ -1.64
NEK3P51956 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.78□□□□□ -1.64
NEK3P51956 AC007954.1-201ENST00000554198 494 ntBASIC4.78□□□□□ -1.64
NEK3P51956 KPNA2P3-201ENST00000584190 848 ntBASIC4.78□□□□□ -1.64
NEK3P51956 AC010738.1-201ENST00000604970 987 ntBASIC4.78□□□□□ -1.64
NEK3P51956 AL031667.3-201ENST00000620124 655 ntBASIC4.78□□□□□ -1.64
NEK3P51956 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
NEK3P51956 OR8B1P-202ENST00000641132 1178 ntBASIC4.78□□□□□ -1.64
NEK3P51956 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.78□□□□□ -1.64
NEK3P51956 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.78□□□□□ -1.64
NEK3P51956 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.78□□□□□ -1.64
NEK3P51956 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
NEK3P51956 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
NEK3P51956 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
NEK3P51956 ZFRP1-201ENST00000457579 2970 ntBASIC4.77□□□□□ -1.65
NEK3P51956 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
NEK3P51956 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
NEK3P51956 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.77□□□□□ -1.65
NEK3P51956 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
NEK3P51956 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
NEK3P51956 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
NEK3P51956 RNU6-989P-201ENST00000362756 107 ntBASIC4.77□□□□□ -1.65
NEK3P51956 RNA5SP88-201ENST00000365560 109 ntBASIC4.77□□□□□ -1.65
NEK3P51956 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
NEK3P51956 RPS3AP23-201ENST00000401762 784 ntBASIC4.77□□□□□ -1.65
NEK3P51956 VN1R8P-201ENST00000407739 893 ntBASIC4.77□□□□□ -1.65
NEK3P51956 RN7SKP267-201ENST00000410381 285 ntBASIC4.77□□□□□ -1.65
NEK3P51956 AL591848.1-201ENST00000413092 322 ntBASIC4.77□□□□□ -1.65
NEK3P51956 EI24P1-201ENST00000416584 867 ntBASIC4.77□□□□□ -1.65
NEK3P51956 AL592293.2-201ENST00000422292 996 ntBASIC4.77□□□□□ -1.65
NEK3P51956 AC093698.1-201ENST00000423843 571 ntBASIC4.77□□□□□ -1.65
NEK3P51956 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC4.77□□□□□ -1.65
NEK3P51956 AL590103.1-201ENST00000434488 307 ntBASIC4.77□□□□□ -1.65
NEK3P51956 PAXBP1P1-201ENST00000449315 447 ntBASIC4.77□□□□□ -1.65
NEK3P51956 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.77□□□□□ -1.65
NEK3P51956 AC104563.1-201ENST00000476147 376 ntBASIC4.77□□□□□ -1.65
NEK3P51956 AC090013.1-201ENST00000485147 480 ntBASIC4.77□□□□□ -1.65
NEK3P51956 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
NEK3P51956 AC083829.1-201ENST00000503756 657 ntBASIC4.77□□□□□ -1.65
NEK3P51956 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4.77□□□□□ -1.65
NEK3P51956 AC093809.1-201ENST00000509155 340 ntBASIC4.77□□□□□ -1.65
NEK3P51956 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.77□□□□□ -1.65
NEK3P51956 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.77□□□□□ -1.65
NEK3P51956 AC118465.1-201ENST00000513820 1271 ntBASIC4.77□□□□□ -1.65
NEK3P51956 AC008802.1-201ENST00000519121 791 ntBASIC4.77□□□□□ -1.65
NEK3P51956 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.77□□□□□ -1.65
NEK3P51956 AC007834.2-201ENST00000536310 343 ntBASIC4.77□□□□□ -1.65
NEK3P51956 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.77□□□□□ -1.65
NEK3P51956 OSBPL9P5-201ENST00000542581 171 ntBASIC4.77□□□□□ -1.65
NEK3P51956 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC4.77□□□□□ -1.65
NEK3P51956 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.77□□□□□ -1.65
NEK3P51956 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.77□□□□□ -1.65
NEK3P51956 AC103792.1-201ENST00000603591 919 ntBASIC4.77□□□□□ -1.65
NEK3P51956 AL596245.1-201ENST00000618994 362 ntBASIC4.77□□□□□ -1.65
NEK3P51956 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
NEK3P51956 AC068057.2-201ENST00000624047 895 ntBASIC4.77□□□□□ -1.65
NEK3P51956 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.77□□□□□ -1.65
NEK3P51956 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC4.77□□□□□ -1.65
NEK3P51956 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.77□□□□□ -1.65
NEK3P51956 DHX40P1-201ENST00000588725 1412 ntBASIC4.77□□□□□ -1.65
NEK3P51956 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.77□□□□□ -1.65
NEK3P51956 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.77□□□□□ -1.65
NEK3P51956 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
NEK3P51956 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
NEK3P51956 PNPT1P2-201ENST00000456768 2050 ntBASIC4.76□□□□□ -1.65
NEK3P51956 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
NEK3P51956 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
NEK3P51956 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
NEK3P51956 RNU6-952P-201ENST00000391164 108 ntBASIC4.76□□□□□ -1.65
NEK3P51956 RPS24P12-201ENST00000402084 394 ntBASIC4.76□□□□□ -1.65
NEK3P51956 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.76□□□□□ -1.65
NEK3P51956 FAR2P2-201ENST00000413041 594 ntBASIC4.76□□□□□ -1.65
NEK3P51956 AC009237.10-201ENST00000414112 510 ntBASIC4.76□□□□□ -1.65
NEK3P51956 ATG4AP1-201ENST00000416893 538 ntBASIC4.76□□□□□ -1.65
NEK3P51956 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC4.76□□□□□ -1.65
NEK3P51956 AC244098.2-201ENST00000422068 99 ntBASIC4.76□□□□□ -1.65
NEK3P51956 AC011233.1-201ENST00000422812 283 ntBASIC4.76□□□□□ -1.65
NEK3P51956 FAR2P4-202ENST00000425399 584 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms