Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.2□□□□□ -1.9
CX3CR1P49238 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.2□□□□□ -1.9
CX3CR1P49238 RPL31P12-201ENST00000422587 358 ntBASIC3.2□□□□□ -1.9
CX3CR1P49238 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC3.2□□□□□ -1.9
CX3CR1P49238 AC006989.1-201ENST00000427212 131 ntBASIC3.2□□□□□ -1.9
CX3CR1P49238 AC022034.3-201ENST00000471393 478 ntBASIC3.2□□□□□ -1.9
CX3CR1P49238 VN1R17P-201ENST00000472048 1090 ntBASIC3.2□□□□□ -1.9
CX3CR1P49238 CYCSP20-201ENST00000473154 315 ntBASIC3.2□□□□□ -1.9
CX3CR1P49238 RPS4XP13-201ENST00000483219 789 ntBASIC3.2□□□□□ -1.9
CX3CR1P49238 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.2□□□□□ -1.9
CX3CR1P49238 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.2□□□□□ -1.9
CX3CR1P49238 RPL23AP73-201ENST00000492507 471 ntBASIC3.2□□□□□ -1.9
CX3CR1P49238 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC3.2□□□□□ -1.9
CX3CR1P49238 HIGD1AP6-201ENST00000521833 279 ntBASIC3.2□□□□□ -1.9
CX3CR1P49238 OR8R1P-201ENST00000543943 764 ntBASIC3.2□□□□□ -1.9
CX3CR1P49238 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC3.2□□□□□ -1.9
CX3CR1P49238 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.2□□□□□ -1.9
CX3CR1P49238 LINC00557-201ENST00000563184 1279 ntBASIC3.2□□□□□ -1.9
CX3CR1P49238 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.2□□□□□ -1.9
CX3CR1P49238 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.2□□□□□ -1.9
CX3CR1P49238 ZNF92P2-201ENST00000600543 1059 ntBASIC3.2□□□□□ -1.9
CX3CR1P49238 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC3.2□□□□□ -1.9
CX3CR1P49238 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CX3CR1P49238 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CX3CR1P49238 AC112200.1-201ENST00000625015 234 ntBASIC3.2□□□□□ -1.9
CX3CR1P49238 AC068620.4-201ENST00000636730 1182 ntBASIC3.2□□□□□ -1.9
CX3CR1P49238 AC132825.7-201ENST00000638744 335 ntBASIC3.2□□□□□ -1.9
CX3CR1P49238 AL732372.2-225ENST00000642124 456 ntBASIC3.2□□□□□ -1.9
CX3CR1P49238 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CX3CR1P49238 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.2□□□□□ -1.9
CX3CR1P49238 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CX3CR1P49238 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
CX3CR1P49238 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CX3CR1P49238 AC025263.3-201ENST00000622965 1396 ntBASIC3.2□□□□□ -1.9
CX3CR1P49238 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CX3CR1P49238 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.2□□□□□ -1.9
CX3CR1P49238 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
CX3CR1P49238 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CX3CR1P49238 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
CX3CR1P49238 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
CX3CR1P49238 AC073073.2-201ENST00000609827 2578 ntBASIC3.19□□□□□ -1.9
CX3CR1P49238 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CX3CR1P49238 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CX3CR1P49238 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
CX3CR1P49238 RNU6-263P-201ENST00000363811 107 ntBASIC3.19□□□□□ -1.9
CX3CR1P49238 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.19□□□□□ -1.9
CX3CR1P49238 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.19□□□□□ -1.9
CX3CR1P49238 MT-TC-201ENST00000387405 66 ntBASIC3.19□□□□□ -1.9
CX3CR1P49238 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.19□□□□□ -1.9
CX3CR1P49238 RPL32P23-201ENST00000397237 405 ntBASIC3.19□□□□□ -1.9
CX3CR1P49238 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CX3CR1P49238 AL121972.1-201ENST00000402023 252 ntBASIC3.19□□□□□ -1.9
CX3CR1P49238 SSXP10-201ENST00000402595 565 ntBASIC3.19□□□□□ -1.9
CX3CR1P49238 CRYBB2P1-203ENST00000415709 538 ntBASIC3.19□□□□□ -1.9
CX3CR1P49238 RPS3AP9-201ENST00000417027 792 ntBASIC3.19□□□□□ -1.9
CX3CR1P49238 AC008280.1-201ENST00000418851 412 ntBASIC3.19□□□□□ -1.9
CX3CR1P49238 AL139247.1-201ENST00000422768 325 ntBASIC3.19□□□□□ -1.9
CX3CR1P49238 AC114973.1-201ENST00000429057 632 ntBASIC3.19□□□□□ -1.9
CX3CR1P49238 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC3.19□□□□□ -1.9
CX3CR1P49238 MRPS18BP2-201ENST00000434310 759 ntBASIC3.19□□□□□ -1.9
CX3CR1P49238 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.19□□□□□ -1.9
CX3CR1P49238 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.19□□□□□ -1.9
CX3CR1P49238 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.19□□□□□ -1.9
CX3CR1P49238 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC3.19□□□□□ -1.9
CX3CR1P49238 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC3.19□□□□□ -1.9
CX3CR1P49238 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.19□□□□□ -1.9
CX3CR1P49238 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.19□□□□□ -1.9
CX3CR1P49238 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.19□□□□□ -1.9
CX3CR1P49238 NF1P3-201ENST00000457709 450 ntBASIC3.19□□□□□ -1.9
CX3CR1P49238 UBDP1-202ENST00000457888 382 ntBASIC3.19□□□□□ -1.9
CX3CR1P49238 RN7SL385P-201ENST00000468873 276 ntBASIC3.19□□□□□ -1.9
CX3CR1P49238 AC005726.1-201ENST00000494679 427 ntBASIC3.19□□□□□ -1.9
CX3CR1P49238 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CX3CR1P49238 AC104057.1-201ENST00000515547 497 ntBASIC3.19□□□□□ -1.9
CX3CR1P49238 RNU6-1073P-201ENST00000517182 106 ntBASIC3.19□□□□□ -1.9
CX3CR1P49238 HIGD1AP5-201ENST00000529959 259 ntBASIC3.19□□□□□ -1.9
CX3CR1P49238 OSBPL9P3-201ENST00000534523 595 ntBASIC3.19□□□□□ -1.9
CX3CR1P49238 AC092470.1-201ENST00000546187 132 ntBASIC3.19□□□□□ -1.9
CX3CR1P49238 SYF2P1-201ENST00000550658 413 ntBASIC3.19□□□□□ -1.9
CX3CR1P49238 AC023161.2-201ENST00000551218 780 ntBASIC3.19□□□□□ -1.9
CX3CR1P49238 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.19□□□□□ -1.9
CX3CR1P49238 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC3.19□□□□□ -1.9
CX3CR1P49238 AC007224.1-201ENST00000564410 144 ntBASIC3.19□□□□□ -1.9
CX3CR1P49238 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.19□□□□□ -1.9
CX3CR1P49238 RN7SL703P-201ENST00000578485 302 ntBASIC3.19□□□□□ -1.9
CX3CR1P49238 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.19□□□□□ -1.9
CX3CR1P49238 AL021368.1-201ENST00000607490 540 ntBASIC3.19□□□□□ -1.9
CX3CR1P49238 AC090425.2-201ENST00000608818 501 ntBASIC3.19□□□□□ -1.9
CX3CR1P49238 AC090912.3-201ENST00000609775 533 ntBASIC3.19□□□□□ -1.9
CX3CR1P49238 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC3.19□□□□□ -1.9
CX3CR1P49238 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC3.19□□□□□ -1.9
CX3CR1P49238 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CX3CR1P49238 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.19□□□□□ -1.9
CX3CR1P49238 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CX3CR1P49238 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
CX3CR1P49238 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CX3CR1P49238 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.19□□□□□ -1.9
CX3CR1P49238 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CX3CR1P49238 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.18□□□□□ -1.9
CX3CR1P49238 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms