Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 COX6CP17-201ENST00000421389 185 ntBASIC4.16□□□□□ -1.74
SOX2P48431 RPL12P34-201ENST00000424532 479 ntBASIC4.16□□□□□ -1.74
SOX2P48431 AL356583.2-201ENST00000426536 280 ntBASIC4.16□□□□□ -1.74
SOX2P48431 AC104651.1-201ENST00000427559 735 ntBASIC4.16□□□□□ -1.74
SOX2P48431 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC4.16□□□□□ -1.74
SOX2P48431 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.16□□□□□ -1.74
SOX2P48431 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC4.16□□□□□ -1.74
SOX2P48431 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4.16□□□□□ -1.74
SOX2P48431 RPL36AP15-201ENST00000444514 266 ntBASIC4.16□□□□□ -1.74
SOX2P48431 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.16□□□□□ -1.74
SOX2P48431 AL033528.1-201ENST00000453780 140 ntBASIC4.16□□□□□ -1.74
SOX2P48431 AL389915.2-201ENST00000454576 441 ntBASIC4.16□□□□□ -1.74
SOX2P48431 OR6K1P-201ENST00000456766 971 ntBASIC4.16□□□□□ -1.74
SOX2P48431 AC093899.1-201ENST00000457984 376 ntBASIC4.16□□□□□ -1.74
SOX2P48431 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC4.16□□□□□ -1.74
SOX2P48431 DEFB109F-201ENST00000491870 277 ntBASIC4.16□□□□□ -1.74
SOX2P48431 RPL7P24-201ENST00000493052 752 ntBASIC4.16□□□□□ -1.74
SOX2P48431 RPL37P25-201ENST00000507308 276 ntBASIC4.16□□□□□ -1.74
SOX2P48431 AC110792.2-201ENST00000510278 224 ntBASIC4.16□□□□□ -1.74
SOX2P48431 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SOX2P48431 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC4.16□□□□□ -1.74
SOX2P48431 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.16□□□□□ -1.74
SOX2P48431 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SOX2P48431 RNA5SP392-201ENST00000516905 112 ntBASIC4.16□□□□□ -1.74
SOX2P48431 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC4.16□□□□□ -1.74
SOX2P48431 OR5G4P-201ENST00000525251 760 ntBASIC4.16□□□□□ -1.74
SOX2P48431 AC022882.1-201ENST00000532142 501 ntBASIC4.16□□□□□ -1.74
SOX2P48431 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC4.16□□□□□ -1.74
SOX2P48431 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC4.16□□□□□ -1.74
SOX2P48431 NTS-203ENST00000551529 801 ntTSL 3 BASIC4.16□□□□□ -1.74
SOX2P48431 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.16□□□□□ -1.74
SOX2P48431 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.16□□□□□ -1.74
SOX2P48431 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.16□□□□□ -1.74
SOX2P48431 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC4.16□□□□□ -1.74
SOX2P48431 MIR5697-201ENST00000578045 78 ntBASIC4.16□□□□□ -1.74
SOX2P48431 AP001180.3-201ENST00000582221 145 ntBASIC4.16□□□□□ -1.74
SOX2P48431 MIR4307-201ENST00000582802 84 ntBASIC4.16□□□□□ -1.74
SOX2P48431 AC011477.5-201ENST00000586571 259 ntBASIC4.16□□□□□ -1.74
SOX2P48431 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.16□□□□□ -1.74
SOX2P48431 BNIP3P8-201ENST00000597863 560 ntBASIC4.16□□□□□ -1.74
SOX2P48431 AL121932.1-201ENST00000605542 214 ntBASIC4.16□□□□□ -1.74
SOX2P48431 AC138749.5-201ENST00000611461 208 ntBASIC4.16□□□□□ -1.74
SOX2P48431 AC116165.2-201ENST00000616705 206 ntBASIC4.16□□□□□ -1.74
SOX2P48431 AC108479.2-201ENST00000617314 601 ntBASIC4.16□□□□□ -1.74
SOX2P48431 AL139089.1-201ENST00000620372 975 ntBASIC4.16□□□□□ -1.74
SOX2P48431 AL023881.1-201ENST00000621088 301 ntBASIC4.16□□□□□ -1.74
SOX2P48431 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC4.16□□□□□ -1.74
SOX2P48431 AL603839.4-201ENST00000624658 1005 ntBASIC4.16□□□□□ -1.74
SOX2P48431 AL353662.3-201ENST00000625131 237 ntBASIC4.16□□□□□ -1.74
SOX2P48431 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.16□□□□□ -1.74
SOX2P48431 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SOX2P48431 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SOX2P48431 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SOX2P48431 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.16□□□□□ -1.74
SOX2P48431 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.16□□□□□ -1.74
SOX2P48431 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SOX2P48431 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
SOX2P48431 OR11H5P-202ENST00000641612 1325 ntBASIC4.16□□□□□ -1.74
SOX2P48431 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.16□□□□□ -1.74
SOX2P48431 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.16□□□□□ -1.74
SOX2P48431 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
SOX2P48431 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SOX2P48431 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC4.15□□□□□ -1.74
SOX2P48431 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.15□□□□□ -1.74
SOX2P48431 ELL2P4-201ENST00000446870 1376 ntBASIC4.15□□□□□ -1.74
SOX2P48431 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.15□□□□□ -1.74
SOX2P48431 AL451142.2-201ENST00000429076 2090 ntBASIC4.15□□□□□ -1.74
SOX2P48431 TLK1P1-201ENST00000456760 2440 ntBASIC4.15□□□□□ -1.74
SOX2P48431 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.15□□□□□ -1.74
SOX2P48431 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.74
SOX2P48431 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.15□□□□□ -1.74
SOX2P48431 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
SOX2P48431 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.15□□□□□ -1.74
SOX2P48431 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
SOX2P48431 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SOX2P48431 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.15□□□□□ -1.75
SOX2P48431 MIR323A-201ENST00000362199 86 ntBASIC4.15□□□□□ -1.75
SOX2P48431 AL031679.1-201ENST00000400616 525 ntBASIC4.15□□□□□ -1.75
SOX2P48431 TANK-206ENST00000406287 875 ntTSL 5 BASIC4.15□□□□□ -1.75
SOX2P48431 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.15□□□□□ -1.75
SOX2P48431 RNU6ATAC25P-201ENST00000408798 117 ntBASIC4.15□□□□□ -1.75
SOX2P48431 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC4.15□□□□□ -1.75
SOX2P48431 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.15□□□□□ -1.75
SOX2P48431 AIMP1P1-201ENST00000418670 937 ntBASIC4.15□□□□□ -1.75
SOX2P48431 RPL7P57-201ENST00000423238 740 ntBASIC4.15□□□□□ -1.75
SOX2P48431 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.15□□□□□ -1.75
SOX2P48431 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.15□□□□□ -1.75
SOX2P48431 AC109583.1-201ENST00000432156 268 ntBASIC4.15□□□□□ -1.75
SOX2P48431 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC4.15□□□□□ -1.75
SOX2P48431 SKP1P1-201ENST00000438081 489 ntBASIC4.15□□□□□ -1.75
SOX2P48431 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.15□□□□□ -1.75
SOX2P48431 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC4.15□□□□□ -1.75
SOX2P48431 GDI2P2-201ENST00000445131 608 ntBASIC4.15□□□□□ -1.75
SOX2P48431 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC4.15□□□□□ -1.75
SOX2P48431 AC104651.2-201ENST00000447549 528 ntBASIC4.15□□□□□ -1.75
SOX2P48431 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.15□□□□□ -1.75
SOX2P48431 HIGD1AP8-201ENST00000453927 274 ntBASIC4.15□□□□□ -1.75
SOX2P48431 SETP20-201ENST00000457046 852 ntBASIC4.15□□□□□ -1.75
SOX2P48431 snoU109.1-201ENST00000459339 135 ntBASIC4.15□□□□□ -1.75
SOX2P48431 AC090142.1-201ENST00000465776 462 ntBASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 193.6 ms