Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 AL672167.1-206ENST00000356293 943 ntBASIC3.68□□□□□ -1.82
SCN4AP35499 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC3.68□□□□□ -1.82
SCN4AP35499 AL356057.1-202ENST00000402263 756 ntBASIC3.68□□□□□ -1.82
SCN4AP35499 RNU6-55P-201ENST00000411092 107 ntBASIC3.68□□□□□ -1.82
SCN4AP35499 RNU6-954P-201ENST00000411355 107 ntBASIC3.68□□□□□ -1.82
SCN4AP35499 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.68□□□□□ -1.82
SCN4AP35499 NPM1P11-201ENST00000417106 855 ntBASIC3.68□□□□□ -1.82
SCN4AP35499 AC073508.1-201ENST00000428866 656 ntBASIC3.68□□□□□ -1.82
SCN4AP35499 FTH1P1-201ENST00000437933 532 ntBASIC3.68□□□□□ -1.82
SCN4AP35499 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.68□□□□□ -1.82
SCN4AP35499 BLNK-209ENST00000495266 440 ntTSL 5 BASIC3.68□□□□□ -1.82
SCN4AP35499 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC3.68□□□□□ -1.82
SCN4AP35499 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.68□□□□□ -1.82
SCN4AP35499 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC3.68□□□□□ -1.82
SCN4AP35499 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.68□□□□□ -1.82
SCN4AP35499 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.68□□□□□ -1.82
SCN4AP35499 uc_338.32-201ENST00000615087 172 ntBASIC3.68□□□□□ -1.82
SCN4AP35499 AC073073.2-201ENST00000609827 2578 ntBASIC3.68□□□□□ -1.82
SCN4AP35499 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
SCN4AP35499 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SCN4AP35499 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SCN4AP35499 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
SCN4AP35499 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SCN4AP35499 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.68□□□□□ -1.82
SCN4AP35499 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC3.68□□□□□ -1.82
SCN4AP35499 AC007342.7-201ENST00000624610 2337 ntBASIC3.68□□□□□ -1.82
SCN4AP35499 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SCN4AP35499 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SCN4AP35499 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SCN4AP35499 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SCN4AP35499 AC116158.1-201ENST00000560231 2129 ntBASIC3.68□□□□□ -1.82
SCN4AP35499 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SCN4AP35499 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SCN4AP35499 MIR184-201ENST00000384962 84 ntBASIC3.67□□□□□ -1.82
SCN4AP35499 RPL7P25-201ENST00000404151 721 ntBASIC3.67□□□□□ -1.82
SCN4AP35499 AC010095.1-201ENST00000443543 144 ntBASIC3.67□□□□□ -1.82
SCN4AP35499 MRPS31P2-201ENST00000451581 518 ntBASIC3.67□□□□□ -1.82
SCN4AP35499 AC117440.1-201ENST00000474107 571 ntBASIC3.67□□□□□ -1.82
SCN4AP35499 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC3.67□□□□□ -1.82
SCN4AP35499 SCARNA20.6-201ENST00000517251 106 ntBASIC3.67□□□□□ -1.82
SCN4AP35499 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
SCN4AP35499 OR4C2P-201ENST00000530855 1064 ntBASIC3.67□□□□□ -1.82
SCN4AP35499 AC091515.1-201ENST00000548110 679 ntBASIC3.67□□□□□ -1.82
SCN4AP35499 AC018552.3-201ENST00000567416 561 ntBASIC3.67□□□□□ -1.82
SCN4AP35499 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC3.67□□□□□ -1.82
SCN4AP35499 VN1R78P-201ENST00000597393 564 ntBASIC3.67□□□□□ -1.82
SCN4AP35499 AC024153.1-201ENST00000603103 365 ntBASIC3.67□□□□□ -1.82
SCN4AP35499 AC004832.5-201ENST00000608677 401 ntBASIC3.67□□□□□ -1.82
SCN4AP35499 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SCN4AP35499 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.67□□□□□ -1.82
SCN4AP35499 RNU6-859P-201ENST00000362728 107 ntBASIC3.67□□□□□ -1.82
SCN4AP35499 AC019155.1-201ENST00000382242 574 ntBASIC3.67□□□□□ -1.82
SCN4AP35499 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SCN4AP35499 BX679664.1-201ENST00000434429 253 ntBASIC3.67□□□□□ -1.82
SCN4AP35499 AC016696.1-201ENST00000446949 318 ntBASIC3.67□□□□□ -1.82
SCN4AP35499 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.67□□□□□ -1.82
SCN4AP35499 EEF1B2P7-201ENST00000451177 676 ntBASIC3.67□□□□□ -1.82
SCN4AP35499 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.67□□□□□ -1.82
SCN4AP35499 AC004801.2-202ENST00000463559 283 ntBASIC3.67□□□□□ -1.82
SCN4AP35499 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC3.67□□□□□ -1.82
SCN4AP35499 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SCN4AP35499 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC3.67□□□□□ -1.82
SCN4AP35499 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC3.67□□□□□ -1.82
SCN4AP35499 AL354950.1-201ENST00000614150 568 ntBASIC3.67□□□□□ -1.82
SCN4AP35499 AC008121.2-201ENST00000614647 523 ntBASIC3.67□□□□□ -1.82
SCN4AP35499 MIR7153-201ENST00000637758 57 ntBASIC3.67□□□□□ -1.82
SCN4AP35499 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.67□□□□□ -1.82
SCN4AP35499 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
SCN4AP35499 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
SCN4AP35499 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SCN4AP35499 AL159169.1-201ENST00000421119 127 ntBASIC3.66□□□□□ -1.82
SCN4AP35499 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.66□□□□□ -1.82
SCN4AP35499 Z99127.3-201ENST00000448158 395 ntBASIC3.66□□□□□ -1.82
SCN4AP35499 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.66□□□□□ -1.82
SCN4AP35499 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
SCN4AP35499 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.66□□□□□ -1.82
SCN4AP35499 AC107934.2-201ENST00000518653 310 ntBASIC3.66□□□□□ -1.82
SCN4AP35499 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.66□□□□□ -1.82
SCN4AP35499 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SCN4AP35499 AC234775.3-201ENST00000564612 656 ntBASIC3.66□□□□□ -1.82
SCN4AP35499 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.66□□□□□ -1.82
SCN4AP35499 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.66□□□□□ -1.82
SCN4AP35499 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC3.66□□□□□ -1.82
SCN4AP35499 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
SCN4AP35499 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SCN4AP35499 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SCN4AP35499 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.66□□□□□ -1.82
SCN4AP35499 AC093909.5-201ENST00000621839 1799 ntBASIC3.66□□□□□ -1.82
SCN4AP35499 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC3.66□□□□□ -1.82
SCN4AP35499 OR11H5P-202ENST00000641612 1325 ntBASIC3.66□□□□□ -1.82
SCN4AP35499 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SCN4AP35499 AC063976.3-201ENST00000426849 329 ntBASIC3.65□□□□□ -1.82
SCN4AP35499 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.65□□□□□ -1.82
SCN4AP35499 MYL8P-204ENST00000431574 518 ntBASIC3.65□□□□□ -1.82
SCN4AP35499 AC087499.2-201ENST00000432861 149 ntBASIC3.65□□□□□ -1.82
SCN4AP35499 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC3.65□□□□□ -1.82
SCN4AP35499 RPL37P4-201ENST00000448908 268 ntBASIC3.65□□□□□ -1.82
SCN4AP35499 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.65□□□□□ -1.82
SCN4AP35499 DNAJC19P1-201ENST00000455312 319 ntBASIC3.65□□□□□ -1.82
SCN4AP35499 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC3.65□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms