Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC4.12□□□□□ -1.75
CTNNA1P35221 MTCO3P20-201ENST00000454926 688 ntBASIC4.12□□□□□ -1.75
CTNNA1P35221 USP9YP5-201ENST00000511770 630 ntBASIC4.12□□□□□ -1.75
CTNNA1P35221 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC4.12□□□□□ -1.75
CTNNA1P35221 snoZ278.1-201ENST00000517059 112 ntBASIC4.12□□□□□ -1.75
CTNNA1P35221 AC023632.1-201ENST00000518463 375 ntBASIC4.12□□□□□ -1.75
CTNNA1P35221 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.12□□□□□ -1.75
CTNNA1P35221 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC4.12□□□□□ -1.75
CTNNA1P35221 AP003730.1-201ENST00000524605 285 ntBASIC4.12□□□□□ -1.75
CTNNA1P35221 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC4.12□□□□□ -1.75
CTNNA1P35221 YPEL5P3-201ENST00000547227 352 ntBASIC4.12□□□□□ -1.75
CTNNA1P35221 AC091516.1-201ENST00000549191 703 ntBASIC4.12□□□□□ -1.75
CTNNA1P35221 CFL2-206ENST00000556161 546 ntTSL 4 BASIC4.12□□□□□ -1.75
CTNNA1P35221 SULT1C2P1-202ENST00000562418 459 ntBASIC4.12□□□□□ -1.75
CTNNA1P35221 AC099489.2-201ENST00000574976 260 ntBASIC4.12□□□□□ -1.75
CTNNA1P35221 MIR4330-201ENST00000579077 105 ntBASIC4.12□□□□□ -1.75
CTNNA1P35221 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CTNNA1P35221 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.12□□□□□ -1.75
CTNNA1P35221 AC011468.4-201ENST00000603942 409 ntBASIC4.12□□□□□ -1.75
CTNNA1P35221 AP003973.1-201ENST00000604639 691 ntBASIC4.12□□□□□ -1.75
CTNNA1P35221 AC006329.2-201ENST00000611491 394 ntBASIC4.12□□□□□ -1.75
CTNNA1P35221 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
CTNNA1P35221 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CTNNA1P35221 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CTNNA1P35221 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.12□□□□□ -1.75
CTNNA1P35221 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
CTNNA1P35221 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.11□□□□□ -1.75
CTNNA1P35221 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CTNNA1P35221 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.11□□□□□ -1.75
CTNNA1P35221 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.11□□□□□ -1.75
CTNNA1P35221 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CTNNA1P35221 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.11□□□□□ -1.75
CTNNA1P35221 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CTNNA1P35221 RNU6-251P-201ENST00000363235 104 ntBASIC4.11□□□□□ -1.75
CTNNA1P35221 RNU6-1249P-201ENST00000363237 111 ntBASIC4.11□□□□□ -1.75
CTNNA1P35221 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
CTNNA1P35221 MIR585-201ENST00000384887 94 ntBASIC4.11□□□□□ -1.75
CTNNA1P35221 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CTNNA1P35221 SNORA40.4-201ENST00000390971 128 ntBASIC4.11□□□□□ -1.75
CTNNA1P35221 RPL7P27-201ENST00000403775 720 ntBASIC4.11□□□□□ -1.75
CTNNA1P35221 RPL26P29-201ENST00000415623 438 ntBASIC4.11□□□□□ -1.75
CTNNA1P35221 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.11□□□□□ -1.75
CTNNA1P35221 AC093698.1-201ENST00000423843 571 ntBASIC4.11□□□□□ -1.75
CTNNA1P35221 RPL31P54-201ENST00000429803 370 ntBASIC4.11□□□□□ -1.75
CTNNA1P35221 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.11□□□□□ -1.75
CTNNA1P35221 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC4.11□□□□□ -1.75
CTNNA1P35221 MRPL50P1-201ENST00000431951 384 ntBASIC4.11□□□□□ -1.75
CTNNA1P35221 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC4.11□□□□□ -1.75
CTNNA1P35221 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.11□□□□□ -1.75
CTNNA1P35221 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC4.11□□□□□ -1.75
CTNNA1P35221 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.11□□□□□ -1.75
CTNNA1P35221 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.11□□□□□ -1.75
CTNNA1P35221 RPL7P52-201ENST00000449200 742 ntBASIC4.11□□□□□ -1.75
CTNNA1P35221 DNAJC19P1-201ENST00000455312 319 ntBASIC4.11□□□□□ -1.75
CTNNA1P35221 PABPC1P3-201ENST00000469174 459 ntBASIC4.11□□□□□ -1.75
CTNNA1P35221 RN7SL738P-201ENST00000470264 297 ntBASIC4.11□□□□□ -1.75
CTNNA1P35221 AC105137.1-201ENST00000484355 562 ntBASIC4.11□□□□□ -1.75
CTNNA1P35221 AL024509.2-201ENST00000493462 493 ntBASIC4.11□□□□□ -1.75
CTNNA1P35221 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.11□□□□□ -1.75
CTNNA1P35221 HMGN1P15-201ENST00000513870 295 ntBASIC4.11□□□□□ -1.75
CTNNA1P35221 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.11□□□□□ -1.75
CTNNA1P35221 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.11□□□□□ -1.75
CTNNA1P35221 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC4.11□□□□□ -1.75
CTNNA1P35221 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CTNNA1P35221 AC044913.1-201ENST00000557200 430 ntBASIC4.11□□□□□ -1.75
CTNNA1P35221 AC090877.1-201ENST00000561418 344 ntBASIC4.11□□□□□ -1.75
CTNNA1P35221 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.11□□□□□ -1.75
CTNNA1P35221 MIR3138-201ENST00000585238 82 ntBASIC4.11□□□□□ -1.75
CTNNA1P35221 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC4.11□□□□□ -1.75
CTNNA1P35221 AC008745.1-201ENST00000604064 271 ntBASIC4.11□□□□□ -1.75
CTNNA1P35221 AC073342.3-201ENST00000624211 193 ntBASIC4.11□□□□□ -1.75
CTNNA1P35221 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.11□□□□□ -1.75
CTNNA1P35221 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC4.11□□□□□ -1.75
CTNNA1P35221 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.11□□□□□ -1.75
CTNNA1P35221 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.11□□□□□ -1.75
CTNNA1P35221 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.1□□□□□ -1.75
CTNNA1P35221 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CTNNA1P35221 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CTNNA1P35221 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.1□□□□□ -1.75
CTNNA1P35221 AL603865.2-201ENST00000401679 213 ntBASIC4.1□□□□□ -1.75
CTNNA1P35221 HLFP1-201ENST00000402375 499 ntBASIC4.1□□□□□ -1.75
CTNNA1P35221 AL024474.1-201ENST00000404655 591 ntBASIC4.1□□□□□ -1.75
CTNNA1P35221 RPL37P18-201ENST00000411602 243 ntBASIC4.1□□□□□ -1.75
CTNNA1P35221 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CTNNA1P35221 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.1□□□□□ -1.75
CTNNA1P35221 AC009480.2-201ENST00000422916 432 ntBASIC4.1□□□□□ -1.75
CTNNA1P35221 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.1□□□□□ -1.75
CTNNA1P35221 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.1□□□□□ -1.75
CTNNA1P35221 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC4.1□□□□□ -1.75
CTNNA1P35221 AL590103.1-201ENST00000434488 307 ntBASIC4.1□□□□□ -1.75
CTNNA1P35221 AC241584.1-201ENST00000438469 1241 ntBASIC4.1□□□□□ -1.75
CTNNA1P35221 RANP8-201ENST00000444720 713 ntBASIC4.1□□□□□ -1.75
CTNNA1P35221 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC4.1□□□□□ -1.75
CTNNA1P35221 MTCO3P16-201ENST00000454456 754 ntBASIC4.1□□□□□ -1.75
CTNNA1P35221 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.1□□□□□ -1.75
CTNNA1P35221 RN7SL459P-201ENST00000481078 302 ntBASIC4.1□□□□□ -1.75
CTNNA1P35221 AC108078.3-201ENST00000502633 489 ntBASIC4.1□□□□□ -1.75
CTNNA1P35221 AC093801.2-201ENST00000503966 1050 ntBASIC4.1□□□□□ -1.75
CTNNA1P35221 AC093767.1-201ENST00000504523 156 ntBASIC4.1□□□□□ -1.75
CTNNA1P35221 AC016550.1-201ENST00000505348 785 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms