Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.61□□□□□ -1.83
SHC1P29353 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
SHC1P29353 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.61□□□□□ -1.83
SHC1P29353 PNPT1P2-201ENST00000456768 2050 ntBASIC3.61□□□□□ -1.83
SHC1P29353 FAM91A3P-201ENST00000456826 2544 ntBASIC3.61□□□□□ -1.83
SHC1P29353 HSPA8P1-201ENST00000425843 1833 ntBASIC3.6□□□□□ -1.83
SHC1P29353 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.6□□□□□ -1.83
SHC1P29353 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
SHC1P29353 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SHC1P29353 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.6□□□□□ -1.83
SHC1P29353 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.6□□□□□ -1.83
SHC1P29353 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SHC1P29353 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SHC1P29353 MIR3074-201ENST00000384885 81 ntBASIC3.6□□□□□ -1.83
SHC1P29353 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.6□□□□□ -1.83
SHC1P29353 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC3.6□□□□□ -1.83
SHC1P29353 AL603766.1-201ENST00000407763 664 ntBASIC3.6□□□□□ -1.83
SHC1P29353 MIR1183-201ENST00000408856 89 ntBASIC3.6□□□□□ -1.83
SHC1P29353 AC105402.1-201ENST00000413336 545 ntBASIC3.6□□□□□ -1.83
SHC1P29353 TCEA1P4-201ENST00000415066 844 ntBASIC3.6□□□□□ -1.83
SHC1P29353 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.6□□□□□ -1.83
SHC1P29353 OR4K6P-201ENST00000416478 897 ntBASIC3.6□□□□□ -1.83
SHC1P29353 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC3.6□□□□□ -1.83
SHC1P29353 AC027644.1-201ENST00000419595 298 ntBASIC3.6□□□□□ -1.83
SHC1P29353 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.6□□□□□ -1.83
SHC1P29353 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.6□□□□□ -1.83
SHC1P29353 AC092170.1-201ENST00000440211 356 ntBASIC3.6□□□□□ -1.83
SHC1P29353 HSFY6P-201ENST00000445573 403 ntBASIC3.6□□□□□ -1.83
SHC1P29353 EXTL2P1-201ENST00000446218 416 ntBASIC3.6□□□□□ -1.83
SHC1P29353 AC005002.1-201ENST00000447458 540 ntBASIC3.6□□□□□ -1.83
SHC1P29353 AC092685.1-201ENST00000447960 1243 ntBASIC3.6□□□□□ -1.83
SHC1P29353 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.6□□□□□ -1.83
SHC1P29353 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.6□□□□□ -1.83
SHC1P29353 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.6□□□□□ -1.83
SHC1P29353 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.6□□□□□ -1.83
SHC1P29353 MTND2P14-201ENST00000482139 351 ntBASIC3.6□□□□□ -1.83
SHC1P29353 RPS3AP22-201ENST00000488297 769 ntBASIC3.6□□□□□ -1.83
SHC1P29353 BTF3L4P4-201ENST00000506381 449 ntBASIC3.6□□□□□ -1.83
SHC1P29353 AC008565.1-201ENST00000509046 885 ntBASIC3.6□□□□□ -1.83
SHC1P29353 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.6□□□□□ -1.83
SHC1P29353 PRELID3BP4-201ENST00000515476 571 ntBASIC3.6□□□□□ -1.83
SHC1P29353 RNU5A-4P-201ENST00000516588 111 ntBASIC3.6□□□□□ -1.83
SHC1P29353 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC3.6□□□□□ -1.83
SHC1P29353 AL356057.1-201ENST00000533798 831 ntBASIC3.6□□□□□ -1.83
SHC1P29353 TOMM20P2-201ENST00000540082 421 ntBASIC3.6□□□□□ -1.83
SHC1P29353 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.6□□□□□ -1.83
SHC1P29353 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC3.6□□□□□ -1.83
SHC1P29353 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.6□□□□□ -1.83
SHC1P29353 AC095057.3-201ENST00000567102 1157 ntBASIC3.6□□□□□ -1.83
SHC1P29353 ATP5F1P7-201ENST00000567330 760 ntBASIC3.6□□□□□ -1.83
SHC1P29353 AC109446.2-201ENST00000567872 497 ntBASIC3.6□□□□□ -1.83
SHC1P29353 MIR3160-1-201ENST00000577972 85 ntBASIC3.6□□□□□ -1.83
SHC1P29353 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.6□□□□□ -1.83
SHC1P29353 MIR548Y-201ENST00000582739 110 ntBASIC3.6□□□□□ -1.83
SHC1P29353 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC3.6□□□□□ -1.83
SHC1P29353 PIGPP4-201ENST00000584447 307 ntBASIC3.6□□□□□ -1.83
SHC1P29353 AP001269.3-201ENST00000588718 329 ntBASIC3.6□□□□□ -1.83
SHC1P29353 VN1R83P-201ENST00000595685 445 ntBASIC3.6□□□□□ -1.83
SHC1P29353 AL583856.2-201ENST00000606298 543 ntBASIC3.6□□□□□ -1.83
SHC1P29353 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.6□□□□□ -1.83
SHC1P29353 AC009090.3-201ENST00000616553 565 ntBASIC3.6□□□□□ -1.83
SHC1P29353 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.6□□□□□ -1.83
SHC1P29353 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SHC1P29353 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SHC1P29353 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SHC1P29353 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
SHC1P29353 AC104454.1-201ENST00000421341 1401 ntBASIC3.6□□□□□ -1.83
SHC1P29353 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SHC1P29353 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SHC1P29353 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SHC1P29353 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
SHC1P29353 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.6□□□□□ -1.83
SHC1P29353 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SHC1P29353 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
SHC1P29353 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SHC1P29353 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
SHC1P29353 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.59□□□□□ -1.83
SHC1P29353 NCAPGP1-201ENST00000505112 1814 ntBASIC3.59□□□□□ -1.83
SHC1P29353 IPO8P1-201ENST00000455509 3109 ntBASIC3.59□□□□□ -1.83
SHC1P29353 METTL21EP-201ENST00000298105 713 ntBASIC3.59□□□□□ -1.83
SHC1P29353 Y_RNA.318-201ENST00000365131 97 ntBASIC3.59□□□□□ -1.83
SHC1P29353 RNU6-549P-201ENST00000384433 107 ntBASIC3.59□□□□□ -1.83
SHC1P29353 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
SHC1P29353 SNORA40.2-201ENST00000390847 128 ntBASIC3.59□□□□□ -1.83
SHC1P29353 AL590084.1-201ENST00000407885 387 ntBASIC3.59□□□□□ -1.83
SHC1P29353 MTND4P22-201ENST00000413116 1169 ntBASIC3.59□□□□□ -1.83
SHC1P29353 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.59□□□□□ -1.83
SHC1P29353 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC3.59□□□□□ -1.83
SHC1P29353 AC090960.1-201ENST00000421072 306 ntBASIC3.59□□□□□ -1.83
SHC1P29353 BX119904.4-201ENST00000424402 301 ntBASIC3.59□□□□□ -1.83
SHC1P29353 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.59□□□□□ -1.83
SHC1P29353 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.59□□□□□ -1.83
SHC1P29353 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC3.59□□□□□ -1.83
SHC1P29353 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC3.59□□□□□ -1.83
SHC1P29353 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.59□□□□□ -1.83
SHC1P29353 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC3.59□□□□□ -1.83
SHC1P29353 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
SHC1P29353 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.59□□□□□ -1.83
SHC1P29353 COX7BP2-201ENST00000437976 242 ntBASIC3.59□□□□□ -1.83
SHC1P29353 AL008629.1-201ENST00000438615 184 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms