Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.14□□□□□ -1.91
USF1P22415 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.14□□□□□ -1.91
USF1P22415 RNA5SP51-201ENST00000364750 119 ntBASIC3.14□□□□□ -1.91
USF1P22415 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.14□□□□□ -1.91
USF1P22415 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
USF1P22415 MTND3P20-201ENST00000407663 186 ntBASIC3.14□□□□□ -1.91
USF1P22415 ATP5A1P2-201ENST00000412323 255 ntBASIC3.14□□□□□ -1.91
USF1P22415 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
USF1P22415 AC073310.1-201ENST00000423226 1033 ntBASIC3.14□□□□□ -1.91
USF1P22415 AL049610.1-201ENST00000423374 372 ntBASIC3.14□□□□□ -1.91
USF1P22415 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.14□□□□□ -1.91
USF1P22415 ETF1P3-201ENST00000430422 1160 ntBASIC3.14□□□□□ -1.91
USF1P22415 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC3.14□□□□□ -1.91
USF1P22415 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.14□□□□□ -1.91
USF1P22415 AL590399.6-201ENST00000446396 307 ntBASIC3.14□□□□□ -1.91
USF1P22415 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.14□□□□□ -1.91
USF1P22415 MTCO3P20-201ENST00000454926 688 ntBASIC3.14□□□□□ -1.91
USF1P22415 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
USF1P22415 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.14□□□□□ -1.91
USF1P22415 RN7SL93P-201ENST00000463035 293 ntBASIC3.14□□□□□ -1.91
USF1P22415 RPL32P34-201ENST00000486380 400 ntBASIC3.14□□□□□ -1.91
USF1P22415 AC108941.1-201ENST00000502853 530 ntBASIC3.14□□□□□ -1.91
USF1P22415 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.14□□□□□ -1.91
USF1P22415 AC026427.2-201ENST00000506228 536 ntBASIC3.14□□□□□ -1.91
USF1P22415 RNU6-1231P-201ENST00000517185 103 ntBASIC3.14□□□□□ -1.91
USF1P22415 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.14□□□□□ -1.91
USF1P22415 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.14□□□□□ -1.91
USF1P22415 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.14□□□□□ -1.91
USF1P22415 AC007991.1-201ENST00000522680 631 ntBASIC3.14□□□□□ -1.91
USF1P22415 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.14□□□□□ -1.91
USF1P22415 OR5B10P-201ENST00000532869 642 ntBASIC3.14□□□□□ -1.91
USF1P22415 AP004242.1-201ENST00000533701 349 ntBASIC3.14□□□□□ -1.91
USF1P22415 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.14□□□□□ -1.91
USF1P22415 AL389895.1-201ENST00000554127 252 ntBASIC3.14□□□□□ -1.91
USF1P22415 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.14□□□□□ -1.91
USF1P22415 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC3.14□□□□□ -1.91
USF1P22415 AC006960.3-201ENST00000561845 705 ntBASIC3.14□□□□□ -1.91
USF1P22415 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC3.14□□□□□ -1.91
USF1P22415 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC3.14□□□□□ -1.91
USF1P22415 AC005412.1-201ENST00000580812 1049 ntBASIC3.14□□□□□ -1.91
USF1P22415 AC007687.1-201ENST00000602704 304 ntBASIC3.14□□□□□ -1.91
USF1P22415 AC010591.1-201ENST00000603941 649 ntBASIC3.14□□□□□ -1.91
USF1P22415 AL160281.1-201ENST00000605307 311 ntBASIC3.14□□□□□ -1.91
USF1P22415 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.14□□□□□ -1.91
USF1P22415 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.14□□□□□ -1.91
USF1P22415 FRG1HP-204ENST00000617940 757 ntBASIC3.14□□□□□ -1.91
USF1P22415 AC244205.2-202ENST00000635781 342 ntBASIC3.14□□□□□ -1.91
USF1P22415 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
USF1P22415 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.14□□□□□ -1.91
USF1P22415 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.14□□□□□ -1.91
USF1P22415 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
USF1P22415 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
USF1P22415 SAGE4P-201ENST00000442271 3381 ntBASIC3.14□□□□□ -1.91
USF1P22415 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
USF1P22415 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
USF1P22415 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.13□□□□□ -1.91
USF1P22415 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
USF1P22415 MFSD8-236ENST00000641509 4050 ntBASIC3.13□□□□□ -1.91
USF1P22415 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
USF1P22415 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
USF1P22415 RNU1-18P-201ENST00000363062 164 ntBASIC3.13□□□□□ -1.91
USF1P22415 RNA5SP27-201ENST00000363839 119 ntBASIC3.13□□□□□ -1.91
USF1P22415 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
USF1P22415 AC234772.1-201ENST00000377927 937 ntBASIC3.13□□□□□ -1.91
USF1P22415 HMGN2P8-201ENST00000391458 268 ntBASIC3.13□□□□□ -1.91
USF1P22415 AL355379.1-201ENST00000405542 640 ntBASIC3.13□□□□□ -1.91
USF1P22415 MTHFD2P2-201ENST00000407725 247 ntBASIC3.13□□□□□ -1.91
USF1P22415 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC3.13□□□□□ -1.91
USF1P22415 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.13□□□□□ -1.91
USF1P22415 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC3.13□□□□□ -1.91
USF1P22415 AC245052.5-201ENST00000416320 649 ntBASIC3.13□□□□□ -1.91
USF1P22415 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.13□□□□□ -1.91
USF1P22415 UBE2V1P1-201ENST00000430836 445 ntBASIC3.13□□□□□ -1.91
USF1P22415 RSL24D1P8-201ENST00000434442 492 ntBASIC3.13□□□□□ -1.91
USF1P22415 UBE2V1P5-201ENST00000440070 405 ntBASIC3.13□□□□□ -1.91
USF1P22415 RPS17P13-201ENST00000448974 407 ntBASIC3.13□□□□□ -1.91
USF1P22415 AL035407.2-201ENST00000454090 378 ntBASIC3.13□□□□□ -1.91
USF1P22415 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
USF1P22415 AC108729.2-201ENST00000476543 840 ntBASIC3.13□□□□□ -1.91
USF1P22415 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC3.13□□□□□ -1.91
USF1P22415 AC078918.1-201ENST00000498515 228 ntBASIC3.13□□□□□ -1.91
USF1P22415 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC3.13□□□□□ -1.91
USF1P22415 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.13□□□□□ -1.91
USF1P22415 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.13□□□□□ -1.91
USF1P22415 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.13□□□□□ -1.91
USF1P22415 AC005921.1-201ENST00000510589 286 ntBASIC3.13□□□□□ -1.91
USF1P22415 RNU6-362P-201ENST00000516736 90 ntBASIC3.13□□□□□ -1.91
USF1P22415 AC092747.2-201ENST00000545069 983 ntBASIC3.13□□□□□ -1.91
USF1P22415 MIR3922-201ENST00000585192 84 ntBASIC3.13□□□□□ -1.91
USF1P22415 AC010928.3-201ENST00000587712 541 ntBASIC3.13□□□□□ -1.91
USF1P22415 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.13□□□□□ -1.91
USF1P22415 AC022146.1-201ENST00000595307 847 ntBASIC3.13□□□□□ -1.91
USF1P22415 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.13□□□□□ -1.91
USF1P22415 OR4H6P-202ENST00000603819 340 ntBASIC3.13□□□□□ -1.91
USF1P22415 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.13□□□□□ -1.91
USF1P22415 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC3.13□□□□□ -1.91
USF1P22415 MIR7975-201ENST00000619350 68 ntBASIC3.13□□□□□ -1.91
USF1P22415 AC243312.2-201ENST00000623340 601 ntBASIC3.13□□□□□ -1.91
USF1P22415 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
USF1P22415 AC090337.1-201ENST00000579651 2074 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms