Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 AC006840.1-201ENST00000623069 542 ntBASIC2.99□□□□□ -1.93
COL5A1P20908 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
COL5A1P20908 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
COL5A1P20908 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
COL5A1P20908 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
COL5A1P20908 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
COL5A1P20908 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
COL5A1P20908 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
COL5A1P20908 ELL2P4-201ENST00000446870 1376 ntBASIC2.99□□□□□ -1.93
COL5A1P20908 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
COL5A1P20908 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
COL5A1P20908 AC093775.1-201ENST00000624154 1868 ntBASIC2.98□□□□□ -1.93
COL5A1P20908 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
COL5A1P20908 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC2.98□□□□□ -1.93
COL5A1P20908 TRGV5P-201ENST00000419915 354 ntBASIC2.98□□□□□ -1.93
COL5A1P20908 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC2.98□□□□□ -1.93
COL5A1P20908 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC2.98□□□□□ -1.93
COL5A1P20908 CST9LP2-201ENST00000437612 320 ntBASIC2.98□□□□□ -1.93
COL5A1P20908 AC010095.1-201ENST00000443543 144 ntBASIC2.98□□□□□ -1.93
COL5A1P20908 AP000926.3-201ENST00000497201 299 ntBASIC2.98□□□□□ -1.93
COL5A1P20908 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC2.98□□□□□ -1.93
COL5A1P20908 AC034159.1-201ENST00000513885 583 ntBASIC2.98□□□□□ -1.93
COL5A1P20908 RNA5SP367-201ENST00000516557 118 ntBASIC2.98□□□□□ -1.93
COL5A1P20908 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC2.98□□□□□ -1.93
COL5A1P20908 COX6CP8-201ENST00000522620 226 ntBASIC2.98□□□□□ -1.93
COL5A1P20908 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
COL5A1P20908 AL512310.1-201ENST00000548639 172 ntBASIC2.98□□□□□ -1.93
COL5A1P20908 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC2.98□□□□□ -1.93
COL5A1P20908 VN1R78P-201ENST00000597393 564 ntBASIC2.98□□□□□ -1.93
COL5A1P20908 AL365400.2-201ENST00000605604 902 ntBASIC2.98□□□□□ -1.93
COL5A1P20908 AC245100.7-201ENST00000609678 442 ntBASIC2.98□□□□□ -1.93
COL5A1P20908 U7.8-201ENST00000619968 63 ntBASIC2.98□□□□□ -1.93
COL5A1P20908 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC2.98□□□□□ -1.93
COL5A1P20908 AC073476.4-201ENST00000628409 72 ntBASIC2.98□□□□□ -1.93
COL5A1P20908 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
COL5A1P20908 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC2.98□□□□□ -1.93
COL5A1P20908 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
COL5A1P20908 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
COL5A1P20908 CD2-201ENST00000369477 478 ntTSL 2 BASIC2.98□□□□□ -1.93
COL5A1P20908 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
COL5A1P20908 SNORD15B-201ENST00000384714 146 ntBASIC2.98□□□□□ -1.93
COL5A1P20908 RPS4XP8-201ENST00000402039 771 ntBASIC2.98□□□□□ -1.93
COL5A1P20908 HSPD1P16-201ENST00000402302 394 ntBASIC2.98□□□□□ -1.93
COL5A1P20908 RPS7P13-201ENST00000413955 498 ntBASIC2.98□□□□□ -1.93
COL5A1P20908 RPS12P23-201ENST00000419579 400 ntBASIC2.98□□□□□ -1.93
COL5A1P20908 AC019097.1-201ENST00000424783 735 ntBASIC2.98□□□□□ -1.93
COL5A1P20908 RPL7P36-201ENST00000444633 681 ntBASIC2.98□□□□□ -1.93
COL5A1P20908 AL109933.2-201ENST00000452651 260 ntBASIC2.98□□□□□ -1.93
COL5A1P20908 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC2.98□□□□□ -1.93
COL5A1P20908 HMGN1P18-201ENST00000457642 277 ntBASIC2.98□□□□□ -1.93
COL5A1P20908 AP002884.2-201ENST00000471647 395 ntBASIC2.98□□□□□ -1.93
COL5A1P20908 AC106872.2-201ENST00000494303 480 ntBASIC2.98□□□□□ -1.93
COL5A1P20908 OR5H3P-201ENST00000502817 919 ntBASIC2.98□□□□□ -1.93
COL5A1P20908 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC2.98□□□□□ -1.93
COL5A1P20908 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC2.98□□□□□ -1.93
COL5A1P20908 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC2.98□□□□□ -1.93
COL5A1P20908 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
COL5A1P20908 RNU6-362P-201ENST00000516736 90 ntBASIC2.98□□□□□ -1.93
COL5A1P20908 AC009812.2-201ENST00000517657 457 ntBASIC2.98□□□□□ -1.93
COL5A1P20908 EIF4A2P3-201ENST00000525903 1055 ntBASIC2.98□□□□□ -1.93
COL5A1P20908 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC2.98□□□□□ -1.93
COL5A1P20908 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.98□□□□□ -1.93
COL5A1P20908 RFPL1S-203ENST00000539579 330 ntBASIC2.98□□□□□ -1.93
COL5A1P20908 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC2.98□□□□□ -1.93
COL5A1P20908 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC2.97□□□□□ -1.93
COL5A1P20908 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
COL5A1P20908 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
COL5A1P20908 MTND4P10-201ENST00000446199 1363 ntBASIC2.97□□□□□ -1.93
COL5A1P20908 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
COL5A1P20908 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
COL5A1P20908 OR5AQ1P-202ENST00000641257 1534 ntBASIC2.97□□□□□ -1.93
COL5A1P20908 OR4G1P-202ENST00000641173 1788 ntBASIC2.97□□□□□ -1.93
COL5A1P20908 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
COL5A1P20908 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
COL5A1P20908 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC2.97□□□□□ -1.93
COL5A1P20908 SRIP2-201ENST00000428470 166 ntBASIC2.97□□□□□ -1.93
COL5A1P20908 TXNP1-201ENST00000441872 371 ntBASIC2.97□□□□□ -1.93
COL5A1P20908 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC2.97□□□□□ -1.93
COL5A1P20908 RAB28P3-201ENST00000448325 597 ntBASIC2.97□□□□□ -1.93
COL5A1P20908 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC2.97□□□□□ -1.93
COL5A1P20908 UBL5P3-201ENST00000475112 231 ntBASIC2.97□□□□□ -1.93
COL5A1P20908 HMGB1P3-201ENST00000502802 616 ntBASIC2.97□□□□□ -1.93
COL5A1P20908 PRELID3BP7-201ENST00000503606 469 ntBASIC2.97□□□□□ -1.93
COL5A1P20908 AP001207.2-201ENST00000519490 539 ntBASIC2.97□□□□□ -1.93
COL5A1P20908 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC2.97□□□□□ -1.93
COL5A1P20908 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
COL5A1P20908 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.97□□□□□ -1.93
COL5A1P20908 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC2.97□□□□□ -1.93
COL5A1P20908 AL358913.1-201ENST00000554342 121 ntBASIC2.97□□□□□ -1.93
COL5A1P20908 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC2.97□□□□□ -1.93
COL5A1P20908 AL365503.1-201ENST00000605247 905 ntBASIC2.97□□□□□ -1.93
COL5A1P20908 AC007619.2-201ENST00000605743 379 ntBASIC2.97□□□□□ -1.93
COL5A1P20908 AL096803.3-201ENST00000609032 532 ntBASIC2.97□□□□□ -1.93
COL5A1P20908 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC2.97□□□□□ -1.93
COL5A1P20908 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC2.97□□□□□ -1.93
COL5A1P20908 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC2.97□□□□□ -1.93
COL5A1P20908 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC2.96□□□□□ -1.93
COL5A1P20908 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
COL5A1P20908 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC2.96□□□□□ -1.94
COL5A1P20908 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 137.2 ms