Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.03□□□□□ -1.76
TOP1P11387 AC009237.5-201ENST00000414271 501 ntBASIC4.03□□□□□ -1.76
TOP1P11387 HSFY4P-201ENST00000415994 1181 ntBASIC4.03□□□□□ -1.76
TOP1P11387 MTCO3P4-201ENST00000419236 787 ntBASIC4.03□□□□□ -1.76
TOP1P11387 RPS15AP40-201ENST00000419621 391 ntBASIC4.03□□□□□ -1.76
TOP1P11387 FO393419.3-201ENST00000428741 282 ntBASIC4.03□□□□□ -1.76
TOP1P11387 RPL7P29-201ENST00000437151 728 ntBASIC4.03□□□□□ -1.76
TOP1P11387 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4.03□□□□□ -1.76
TOP1P11387 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC4.03□□□□□ -1.76
TOP1P11387 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.03□□□□□ -1.76
TOP1P11387 PLGLA-201ENST00000465668 449 ntBASIC4.03□□□□□ -1.76
TOP1P11387 AC090543.1-201ENST00000492168 485 ntBASIC4.03□□□□□ -1.76
TOP1P11387 AC093663.1-201ENST00000497190 394 ntBASIC4.03□□□□□ -1.76
TOP1P11387 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
TOP1P11387 TMEM248P1-201ENST00000510579 951 ntBASIC4.03□□□□□ -1.76
TOP1P11387 AC074250.1-201ENST00000511117 192 ntBASIC4.03□□□□□ -1.76
TOP1P11387 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC4.03□□□□□ -1.76
TOP1P11387 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC4.03□□□□□ -1.76
TOP1P11387 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC4.03□□□□□ -1.76
TOP1P11387 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.03□□□□□ -1.76
TOP1P11387 AC026616.1-201ENST00000523157 525 ntBASIC4.03□□□□□ -1.76
TOP1P11387 MTND2P26-201ENST00000528255 1029 ntBASIC4.03□□□□□ -1.76
TOP1P11387 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.03□□□□□ -1.76
TOP1P11387 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.03□□□□□ -1.76
TOP1P11387 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC4.03□□□□□ -1.76
TOP1P11387 NCAPGP2-201ENST00000557911 754 ntBASIC4.03□□□□□ -1.76
TOP1P11387 TGIF1P1-201ENST00000558095 802 ntBASIC4.03□□□□□ -1.76
TOP1P11387 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.03□□□□□ -1.76
TOP1P11387 AC242628.1-201ENST00000606810 391 ntBASIC4.03□□□□□ -1.76
TOP1P11387 AC016911.1-201ENST00000613297 452 ntBASIC4.03□□□□□ -1.76
TOP1P11387 AC008121.2-201ENST00000614647 523 ntBASIC4.03□□□□□ -1.76
TOP1P11387 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC4.03□□□□□ -1.76
TOP1P11387 AC000367.1-201ENST00000452711 1766 ntBASIC4.03□□□□□ -1.76
TOP1P11387 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
TOP1P11387 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
TOP1P11387 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
TOP1P11387 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
TOP1P11387 AC011978.2-201ENST00000569835 2054 ntBASIC4.02□□□□□ -1.77
TOP1P11387 AF127577.6-201ENST00000623352 2191 ntBASIC4.02□□□□□ -1.77
TOP1P11387 METTL21EP-201ENST00000298105 713 ntBASIC4.02□□□□□ -1.77
TOP1P11387 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC4.02□□□□□ -1.77
TOP1P11387 RNVU1-14-201ENST00000384770 164 ntBASIC4.02□□□□□ -1.77
TOP1P11387 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.02□□□□□ -1.77
TOP1P11387 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.02□□□□□ -1.77
TOP1P11387 AC005019.1-201ENST00000436455 431 ntBASIC4.02□□□□□ -1.77
TOP1P11387 NPM1P49-201ENST00000448027 714 ntBASIC4.02□□□□□ -1.77
TOP1P11387 RPL21P10-201ENST00000463521 490 ntBASIC4.02□□□□□ -1.77
TOP1P11387 AP000563.1-201ENST00000490865 758 ntBASIC4.02□□□□□ -1.77
TOP1P11387 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC4.02□□□□□ -1.77
TOP1P11387 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC4.02□□□□□ -1.77
TOP1P11387 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.02□□□□□ -1.77
TOP1P11387 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC4.02□□□□□ -1.77
TOP1P11387 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
TOP1P11387 NDUFB9P3-201ENST00000521269 501 ntBASIC4.02□□□□□ -1.77
TOP1P11387 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC4.02□□□□□ -1.77
TOP1P11387 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC4.02□□□□□ -1.77
TOP1P11387 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.02□□□□□ -1.77
TOP1P11387 AC067852.3-201ENST00000589177 561 ntBASIC4.02□□□□□ -1.77
TOP1P11387 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.02□□□□□ -1.77
TOP1P11387 AC006557.5-201ENST00000603126 811 ntBASIC4.02□□□□□ -1.77
TOP1P11387 AL359535.1-201ENST00000612100 1087 ntBASIC4.02□□□□□ -1.77
TOP1P11387 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
TOP1P11387 AL118556.2-201ENST00000614375 824 ntBASIC4.02□□□□□ -1.77
TOP1P11387 AC022149.2-201ENST00000621061 203 ntBASIC4.02□□□□□ -1.77
TOP1P11387 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC4.02□□□□□ -1.77
TOP1P11387 AC048347.1-201ENST00000624621 427 ntBASIC4.02□□□□□ -1.77
TOP1P11387 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
TOP1P11387 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
TOP1P11387 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
TOP1P11387 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
TOP1P11387 AC032011.1-201ENST00000611703 1549 ntBASIC4.01□□□□□ -1.77
TOP1P11387 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
TOP1P11387 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC4.01□□□□□ -1.77
TOP1P11387 XPOTP1-201ENST00000443317 2398 ntBASIC4.01□□□□□ -1.77
TOP1P11387 RNA5SP267-201ENST00000364893 126 ntBASIC4.01□□□□□ -1.77
TOP1P11387 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
TOP1P11387 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
TOP1P11387 Z86062.1-201ENST00000406773 777 ntBASIC4.01□□□□□ -1.77
TOP1P11387 CKS1BP5-201ENST00000434172 273 ntBASIC4.01□□□□□ -1.77
TOP1P11387 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC4.01□□□□□ -1.77
TOP1P11387 AL357552.1-201ENST00000445254 415 ntBASIC4.01□□□□□ -1.77
TOP1P11387 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.01□□□□□ -1.77
TOP1P11387 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.01□□□□□ -1.77
TOP1P11387 BX276092.4-201ENST00000452056 248 ntBASIC4.01□□□□□ -1.77
TOP1P11387 RPL23AP62-201ENST00000463396 453 ntBASIC4.01□□□□□ -1.77
TOP1P11387 RPS4XP10-201ENST00000465034 731 ntBASIC4.01□□□□□ -1.77
TOP1P11387 HSPD1P15-201ENST00000505573 1122 ntBASIC4.01□□□□□ -1.77
TOP1P11387 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
TOP1P11387 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
TOP1P11387 FCF1P8-201ENST00000510322 597 ntBASIC4.01□□□□□ -1.77
TOP1P11387 AC004923.2-201ENST00000529649 369 ntBASIC4.01□□□□□ -1.77
TOP1P11387 BNIP3P38-201ENST00000601117 544 ntBASIC4.01□□□□□ -1.77
TOP1P11387 AC012468.1-201ENST00000604888 430 ntBASIC4.01□□□□□ -1.77
TOP1P11387 AC007179.3-201ENST00000604976 235 ntBASIC4.01□□□□□ -1.77
TOP1P11387 AC015802.5-201ENST00000607478 399 ntBASIC4.01□□□□□ -1.77
TOP1P11387 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
TOP1P11387 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.01□□□□□ -1.77
TOP1P11387 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
TOP1P11387 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC4□□□□□ -1.77
TOP1P11387 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms