Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.67□□□□□ -1.82
TPM1P09493 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.67□□□□□ -1.82
TPM1P09493 HSPA8P19-201ENST00000505359 1517 ntBASIC3.67□□□□□ -1.82
TPM1P09493 RNU6-819P-201ENST00000364116 107 ntBASIC3.67□□□□□ -1.82
TPM1P09493 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
TPM1P09493 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
TPM1P09493 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.67□□□□□ -1.82
TPM1P09493 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.67□□□□□ -1.82
TPM1P09493 RN7SKP58-201ENST00000411010 305 ntBASIC3.67□□□□□ -1.82
TPM1P09493 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC3.67□□□□□ -1.82
TPM1P09493 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.67□□□□□ -1.82
TPM1P09493 OR2AS1P-201ENST00000427827 319 ntBASIC3.67□□□□□ -1.82
TPM1P09493 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.67□□□□□ -1.82
TPM1P09493 RPL37P1-201ENST00000432310 284 ntBASIC3.67□□□□□ -1.82
TPM1P09493 RPS29P7-201ENST00000439662 171 ntBASIC3.67□□□□□ -1.82
TPM1P09493 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.67□□□□□ -1.82
TPM1P09493 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.67□□□□□ -1.82
TPM1P09493 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.67□□□□□ -1.82
TPM1P09493 RPL21P104-201ENST00000464143 478 ntBASIC3.67□□□□□ -1.82
TPM1P09493 RPS27AP1-201ENST00000475545 471 ntBASIC3.67□□□□□ -1.82
TPM1P09493 AC012181.1-201ENST00000479895 423 ntBASIC3.67□□□□□ -1.82
TPM1P09493 MTND3P6-201ENST00000485242 339 ntBASIC3.67□□□□□ -1.82
TPM1P09493 HMGB1P3-201ENST00000502802 616 ntBASIC3.67□□□□□ -1.82
TPM1P09493 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
TPM1P09493 HMGB1P47-201ENST00000511281 589 ntBASIC3.67□□□□□ -1.82
TPM1P09493 AC093770.1-201ENST00000511559 571 ntBASIC3.67□□□□□ -1.82
TPM1P09493 AC008494.2-201ENST00000514544 370 ntBASIC3.67□□□□□ -1.82
TPM1P09493 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC3.67□□□□□ -1.82
TPM1P09493 AC004923.2-201ENST00000529649 369 ntBASIC3.67□□□□□ -1.82
TPM1P09493 AP003717.3-201ENST00000544832 1180 ntBASIC3.67□□□□□ -1.82
TPM1P09493 AC084033.1-201ENST00000550830 633 ntBASIC3.67□□□□□ -1.82
TPM1P09493 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC3.67□□□□□ -1.82
TPM1P09493 AC107982.3-201ENST00000584957 985 ntBASIC3.67□□□□□ -1.82
TPM1P09493 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.67□□□□□ -1.82
TPM1P09493 AC020914.6-201ENST00000594327 272 ntBASIC3.67□□□□□ -1.82
TPM1P09493 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
TPM1P09493 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.67□□□□□ -1.82
TPM1P09493 MIR6758-201ENST00000620653 63 ntBASIC3.67□□□□□ -1.82
TPM1P09493 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.67□□□□□ -1.82
TPM1P09493 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
TPM1P09493 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
TPM1P09493 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.67□□□□□ -1.82
TPM1P09493 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
TPM1P09493 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.67□□□□□ -1.82
TPM1P09493 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
TPM1P09493 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.67□□□□□ -1.82
TPM1P09493 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
TPM1P09493 AC116096.1-201ENST00000566804 2314 ntBASIC3.66□□□□□ -1.82
TPM1P09493 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.66□□□□□ -1.82
TPM1P09493 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
TPM1P09493 AL645937.1-201ENST00000641739 1652 ntBASIC3.66□□□□□ -1.82
TPM1P09493 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
TPM1P09493 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
TPM1P09493 RNU2-71P-201ENST00000411395 189 ntBASIC3.66□□□□□ -1.82
TPM1P09493 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.66□□□□□ -1.82
TPM1P09493 AC010385.1-201ENST00000412374 256 ntBASIC3.66□□□□□ -1.82
TPM1P09493 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.66□□□□□ -1.82
TPM1P09493 AC005517.2-201ENST00000424673 553 ntBASIC3.66□□□□□ -1.82
TPM1P09493 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC3.66□□□□□ -1.82
TPM1P09493 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.66□□□□□ -1.82
TPM1P09493 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.66□□□□□ -1.82
TPM1P09493 RPL7P52-201ENST00000449200 742 ntBASIC3.66□□□□□ -1.82
TPM1P09493 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.66□□□□□ -1.82
TPM1P09493 AC091179.1-201ENST00000461606 579 ntBASIC3.66□□□□□ -1.82
TPM1P09493 RPL5P24-201ENST00000463742 885 ntBASIC3.66□□□□□ -1.82
TPM1P09493 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC3.66□□□□□ -1.82
TPM1P09493 AC093663.1-201ENST00000497190 394 ntBASIC3.66□□□□□ -1.82
TPM1P09493 OR5H3P-201ENST00000502817 919 ntBASIC3.66□□□□□ -1.82
TPM1P09493 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.66□□□□□ -1.82
TPM1P09493 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
TPM1P09493 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.66□□□□□ -1.82
TPM1P09493 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.66□□□□□ -1.82
TPM1P09493 APOOP4-201ENST00000513530 597 ntBASIC3.66□□□□□ -1.82
TPM1P09493 RN7SKP18-201ENST00000516005 275 ntBASIC3.66□□□□□ -1.82
TPM1P09493 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC3.66□□□□□ -1.82
TPM1P09493 AC104997.1-201ENST00000519761 717 ntBASIC3.66□□□□□ -1.82
TPM1P09493 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.66□□□□□ -1.82
TPM1P09493 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.66□□□□□ -1.82
TPM1P09493 AC007991.1-201ENST00000522680 631 ntBASIC3.66□□□□□ -1.82
TPM1P09493 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.66□□□□□ -1.82
TPM1P09493 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.66□□□□□ -1.82
TPM1P09493 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC3.66□□□□□ -1.82
TPM1P09493 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.66□□□□□ -1.82
TPM1P09493 RN7SL703P-201ENST00000578485 302 ntBASIC3.66□□□□□ -1.82
TPM1P09493 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC3.66□□□□□ -1.82
TPM1P09493 BNIP3P7-201ENST00000605641 516 ntBASIC3.66□□□□□ -1.82
TPM1P09493 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.66□□□□□ -1.82
TPM1P09493 AL356321.1-201ENST00000621360 228 ntBASIC3.66□□□□□ -1.82
TPM1P09493 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
TPM1P09493 RNA5SP196-201ENST00000625967 102 ntBASIC3.66□□□□□ -1.82
TPM1P09493 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.66□□□□□ -1.82
TPM1P09493 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.66□□□□□ -1.82
TPM1P09493 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
TPM1P09493 TANK-205ENST00000405852 2155 ntTSL 5 BASIC3.65□□□□□ -1.82
TPM1P09493 AC107081.3-201ENST00000612715 2034 ntBASIC3.65□□□□□ -1.82
TPM1P09493 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
TPM1P09493 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
TPM1P09493 RNU4-23P-201ENST00000362839 140 ntBASIC3.65□□□□□ -1.83
TPM1P09493 U3.6-201ENST00000363622 211 ntBASIC3.65□□□□□ -1.83
TPM1P09493 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 132.1 ms