Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC3.96□□□□□ -1.78
CD48P09326 BMS1P21-201ENST00000634565 365 ntBASIC3.96□□□□□ -1.78
CD48P09326 AC244205.2-202ENST00000635781 342 ntBASIC3.96□□□□□ -1.78
CD48P09326 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CD48P09326 AC006042.3-201ENST00000454684 1469 ntBASIC3.96□□□□□ -1.78
CD48P09326 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
CD48P09326 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.96□□□□□ -1.78
CD48P09326 AC008725.1-201ENST00000605123 2263 ntBASIC3.96□□□□□ -1.78
CD48P09326 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.96□□□□□ -1.78
CD48P09326 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.78
CD48P09326 AC006504.1-201ENST00000562493 3666 ntBASIC3.96□□□□□ -1.78
CD48P09326 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CD48P09326 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.95□□□□□ -1.78
CD48P09326 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
CD48P09326 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.95□□□□□ -1.78
CD48P09326 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
CD48P09326 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC3.95□□□□□ -1.78
CD48P09326 OR5H2-201ENST00000355273 945 ntBASIC3.95□□□□□ -1.78
CD48P09326 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
CD48P09326 RNU6-984P-201ENST00000363236 109 ntBASIC3.95□□□□□ -1.78
CD48P09326 snoZ40.1-201ENST00000364540 72 ntBASIC3.95□□□□□ -1.78
CD48P09326 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.95□□□□□ -1.78
CD48P09326 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
CD48P09326 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
CD48P09326 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
CD48P09326 U1.1-201ENST00000384101 164 ntBASIC3.95□□□□□ -1.78
CD48P09326 RNU6-225P-201ENST00000384613 103 ntBASIC3.95□□□□□ -1.78
CD48P09326 ATP5F1P4-201ENST00000397288 746 ntBASIC3.95□□□□□ -1.78
CD48P09326 RNU6-77P-201ENST00000410554 91 ntBASIC3.95□□□□□ -1.78
CD48P09326 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC3.95□□□□□ -1.78
CD48P09326 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.95□□□□□ -1.78
CD48P09326 AC022022.1-201ENST00000430304 178 ntBASIC3.95□□□□□ -1.78
CD48P09326 MOB1AP1-201ENST00000430903 535 ntBASIC3.95□□□□□ -1.78
CD48P09326 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.95□□□□□ -1.78
CD48P09326 COX7BP2-201ENST00000437976 242 ntBASIC3.95□□□□□ -1.78
CD48P09326 AL008629.1-201ENST00000438615 184 ntBASIC3.95□□□□□ -1.78
CD48P09326 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC3.95□□□□□ -1.78
CD48P09326 AL035551.1-201ENST00000446931 348 ntBASIC3.95□□□□□ -1.78
CD48P09326 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC3.95□□□□□ -1.78
CD48P09326 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CD48P09326 NUTF2P7-201ENST00000453086 375 ntBASIC3.95□□□□□ -1.78
CD48P09326 MRPL42P4-201ENST00000453267 443 ntBASIC3.95□□□□□ -1.78
CD48P09326 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC3.95□□□□□ -1.78
CD48P09326 AC073522.1-201ENST00000483312 377 ntBASIC3.95□□□□□ -1.78
CD48P09326 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC3.95□□□□□ -1.78
CD48P09326 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC3.95□□□□□ -1.78
CD48P09326 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC3.95□□□□□ -1.78
CD48P09326 AC091951.3-201ENST00000504093 246 ntBASIC3.95□□□□□ -1.78
CD48P09326 AC010486.3-201ENST00000511602 785 ntBASIC3.95□□□□□ -1.78
CD48P09326 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC3.95□□□□□ -1.78
CD48P09326 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC3.95□□□□□ -1.78
CD48P09326 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC3.95□□□□□ -1.78
CD48P09326 NBEAP1-201ENST00000554452 979 ntBASIC3.95□□□□□ -1.78
CD48P09326 PARP1P2-201ENST00000556806 195 ntBASIC3.95□□□□□ -1.78
CD48P09326 AC122134.1-201ENST00000565664 1104 ntBASIC3.95□□□□□ -1.78
CD48P09326 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.95□□□□□ -1.78
CD48P09326 AC109446.2-201ENST00000567872 497 ntBASIC3.95□□□□□ -1.78
CD48P09326 AL354943.1-201ENST00000572103 781 ntBASIC3.95□□□□□ -1.78
CD48P09326 MIR4644-201ENST00000579929 84 ntBASIC3.95□□□□□ -1.78
CD48P09326 AP001542.2-201ENST00000593141 364 ntBASIC3.95□□□□□ -1.78
CD48P09326 AL606490.9-201ENST00000603331 271 ntBASIC3.95□□□□□ -1.78
CD48P09326 AC069304.3-201ENST00000603938 1084 ntBASIC3.95□□□□□ -1.78
CD48P09326 DPRXP5-201ENST00000604662 539 ntBASIC3.95□□□□□ -1.78
CD48P09326 AL392112.1-201ENST00000605115 829 ntBASIC3.95□□□□□ -1.78
CD48P09326 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC3.95□□□□□ -1.78
CD48P09326 AC064807.4-201ENST00000607201 407 ntBASIC3.95□□□□□ -1.78
CD48P09326 AL360219.1-201ENST00000610230 366 ntBASIC3.95□□□□□ -1.78
CD48P09326 MIR6875-201ENST00000617506 72 ntBASIC3.95□□□□□ -1.78
CD48P09326 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.95□□□□□ -1.78
CD48P09326 U7.8-201ENST00000619968 63 ntBASIC3.95□□□□□ -1.78
CD48P09326 AL512506.2-201ENST00000624472 458 ntBASIC3.95□□□□□ -1.78
CD48P09326 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.95□□□□□ -1.78
CD48P09326 AC087821.2-201ENST00000637086 450 ntBASIC3.95□□□□□ -1.78
CD48P09326 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CD48P09326 AC093535.2-201ENST00000624769 2326 ntBASIC3.95□□□□□ -1.78
CD48P09326 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.95□□□□□ -1.78
CD48P09326 CYP1D1P-201ENST00000416662 1433 ntBASIC3.95□□□□□ -1.78
CD48P09326 OR11H5P-202ENST00000641612 1325 ntBASIC3.95□□□□□ -1.78
CD48P09326 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
CD48P09326 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
CD48P09326 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CD48P09326 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.94□□□□□ -1.78
CD48P09326 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
CD48P09326 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
CD48P09326 RNA5SP97-201ENST00000365006 84 ntBASIC3.94□□□□□ -1.78
CD48P09326 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CD48P09326 SNORA11C-201ENST00000408532 129 ntBASIC3.94□□□□□ -1.78
CD48P09326 MIR1183-201ENST00000408856 89 ntBASIC3.94□□□□□ -1.78
CD48P09326 RNU6-575P-201ENST00000411326 105 ntBASIC3.94□□□□□ -1.78
CD48P09326 AC004975.1-201ENST00000428733 208 ntBASIC3.94□□□□□ -1.78
CD48P09326 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC3.94□□□□□ -1.78
CD48P09326 HMGB1P45-201ENST00000435986 653 ntBASIC3.94□□□□□ -1.78
CD48P09326 AC234064.1-201ENST00000436312 247 ntBASIC3.94□□□□□ -1.78
CD48P09326 GTF2IP7-202ENST00000436677 309 ntBASIC3.94□□□□□ -1.78
CD48P09326 AP000936.3-201ENST00000438127 255 ntBASIC3.94□□□□□ -1.78
CD48P09326 AC092809.1-201ENST00000441469 474 ntBASIC3.94□□□□□ -1.78
CD48P09326 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CD48P09326 HSFY6P-201ENST00000445573 403 ntBASIC3.94□□□□□ -1.78
CD48P09326 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC3.94□□□□□ -1.78
CD48P09326 AL162388.1-201ENST00000450912 352 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms