Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 RPL26P28-201ENST00000451325 435 ntBASIC3.63□□□□□ -1.83
RETP07949 HGF-207ENST00000453018 721 ntTSL 3 BASIC3.63□□□□□ -1.83
RETP07949 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC3.63□□□□□ -1.83
RETP07949 RPL23AP14-201ENST00000468281 468 ntBASIC3.63□□□□□ -1.83
RETP07949 HMGB1P3-201ENST00000502802 616 ntBASIC3.63□□□□□ -1.83
RETP07949 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC3.63□□□□□ -1.83
RETP07949 MTCO1P31-201ENST00000506355 492 ntBASIC3.63□□□□□ -1.83
RETP07949 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.63□□□□□ -1.83
RETP07949 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.63□□□□□ -1.83
RETP07949 AC005921.1-201ENST00000510589 286 ntBASIC3.63□□□□□ -1.83
RETP07949 AC021146.1-201ENST00000511202 716 ntBASIC3.63□□□□□ -1.83
RETP07949 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC3.63□□□□□ -1.83
RETP07949 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
RETP07949 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.63□□□□□ -1.83
RETP07949 AL121576.1-201ENST00000556055 276 ntBASIC3.63□□□□□ -1.83
RETP07949 AC012414.2-201ENST00000559474 187 ntBASIC3.63□□□□□ -1.83
RETP07949 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC3.63□□□□□ -1.83
RETP07949 LARP7P3-201ENST00000579888 337 ntBASIC3.63□□□□□ -1.83
RETP07949 RNA5SP108-201ENST00000605921 117 ntBASIC3.63□□□□□ -1.83
RETP07949 AC116312.1-201ENST00000606841 314 ntBASIC3.63□□□□□ -1.83
RETP07949 AC006946.3-201ENST00000609791 756 ntBASIC3.63□□□□□ -1.83
RETP07949 MIR7112-201ENST00000616126 65 ntBASIC3.63□□□□□ -1.83
RETP07949 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC3.63□□□□□ -1.83
RETP07949 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
RETP07949 AC006504.1-201ENST00000562493 3666 ntBASIC3.63□□□□□ -1.83
RETP07949 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.63□□□□□ -1.83
RETP07949 AC092326.2-201ENST00000624772 1561 ntBASIC3.63□□□□□ -1.83
RETP07949 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.63□□□□□ -1.83
RETP07949 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.62□□□□□ -1.83
RETP07949 AL359715.4-201ENST00000606629 1436 ntBASIC3.62□□□□□ -1.83
RETP07949 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.62□□□□□ -1.83
RETP07949 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
RETP07949 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
RETP07949 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
RETP07949 MIR591-201ENST00000385290 95 ntBASIC3.62□□□□□ -1.83
RETP07949 MTND3P20-201ENST00000407663 186 ntBASIC3.62□□□□□ -1.83
RETP07949 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC3.62□□□□□ -1.83
RETP07949 AC245054.1-201ENST00000420944 258 ntBASIC3.62□□□□□ -1.83
RETP07949 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.62□□□□□ -1.83
RETP07949 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.62□□□□□ -1.83
RETP07949 ATP5JP1-201ENST00000431631 322 ntBASIC3.62□□□□□ -1.83
RETP07949 MTCYBP12-201ENST00000440559 1134 ntBASIC3.62□□□□□ -1.83
RETP07949 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.62□□□□□ -1.83
RETP07949 AC114878.1-201ENST00000441166 358 ntBASIC3.62□□□□□ -1.83
RETP07949 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC3.62□□□□□ -1.83
RETP07949 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.62□□□□□ -1.83
RETP07949 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.62□□□□□ -1.83
RETP07949 RNU7-27P-201ENST00000459281 62 ntBASIC3.62□□□□□ -1.83
RETP07949 AC006511.1-201ENST00000470614 315 ntBASIC3.62□□□□□ -1.83
RETP07949 RN7SL429P-201ENST00000479090 223 ntBASIC3.62□□□□□ -1.83
RETP07949 AC025518.1-201ENST00000479856 347 ntBASIC3.62□□□□□ -1.83
RETP07949 RN7SL489P-201ENST00000486185 223 ntBASIC3.62□□□□□ -1.83
RETP07949 RN7SL327P-201ENST00000488659 223 ntBASIC3.62□□□□□ -1.83
RETP07949 RNU6-760P-201ENST00000516078 97 ntBASIC3.62□□□□□ -1.83
RETP07949 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC3.62□□□□□ -1.83
RETP07949 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC3.62□□□□□ -1.83
RETP07949 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC3.62□□□□□ -1.83
RETP07949 MTCO3P22-201ENST00000603219 784 ntBASIC3.62□□□□□ -1.83
RETP07949 AP003117.2-201ENST00000606010 545 ntBASIC3.62□□□□□ -1.83
RETP07949 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.62□□□□□ -1.83
RETP07949 AC008121.2-201ENST00000614647 523 ntBASIC3.62□□□□□ -1.83
RETP07949 RN7SL853P-201ENST00000617250 223 ntBASIC3.62□□□□□ -1.83
RETP07949 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC3.62□□□□□ -1.83
RETP07949 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
RETP07949 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.62□□□□□ -1.83
RETP07949 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
RETP07949 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
RETP07949 AL353743.1-202ENST00000431724 1695 ntBASIC3.62□□□□□ -1.83
RETP07949 DDX6P1-205ENST00000441966 1436 ntBASIC3.61□□□□□ -1.83
RETP07949 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
RETP07949 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
RETP07949 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
RETP07949 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
RETP07949 RNA5SP189-201ENST00000364920 115 ntBASIC3.61□□□□□ -1.83
RETP07949 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
RETP07949 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.61□□□□□ -1.83
RETP07949 AC002075.2-201ENST00000425207 252 ntBASIC3.61□□□□□ -1.83
RETP07949 AL445528.1-201ENST00000426330 420 ntBASIC3.61□□□□□ -1.83
RETP07949 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.61□□□□□ -1.83
RETP07949 NEK4P1-201ENST00000433383 879 ntBASIC3.61□□□□□ -1.83
RETP07949 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.61□□□□□ -1.83
RETP07949 TRAPPC13P1-201ENST00000435991 1062 ntBASIC3.61□□□□□ -1.83
RETP07949 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.61□□□□□ -1.83
RETP07949 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC3.61□□□□□ -1.83
RETP07949 MRPL35P4-201ENST00000453682 566 ntBASIC3.61□□□□□ -1.83
RETP07949 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.61□□□□□ -1.83
RETP07949 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.61□□□□□ -1.83
RETP07949 AC020893.1-201ENST00000502452 580 ntBASIC3.61□□□□□ -1.83
RETP07949 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.61□□□□□ -1.83
RETP07949 OR5H4P-201ENST00000510851 923 ntBASIC3.61□□□□□ -1.83
RETP07949 AC010285.3-201ENST00000511668 676 ntBASIC3.61□□□□□ -1.83
RETP07949 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.61□□□□□ -1.83
RETP07949 IGHV3-76-201ENST00000522465 295 ntBASIC3.61□□□□□ -1.83
RETP07949 AC008489.1-201ENST00000524271 483 ntBASIC3.61□□□□□ -1.83
RETP07949 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.61□□□□□ -1.83
RETP07949 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.61□□□□□ -1.83
RETP07949 AL845331.3-202ENST00000562856 261 ntBASIC3.61□□□□□ -1.83
RETP07949 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.61□□□□□ -1.83
RETP07949 NF1P5-201ENST00000588287 448 ntBASIC3.61□□□□□ -1.83
RETP07949 AC012467.1-201ENST00000607740 256 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms