Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 AL109941.1-201ENST00000401925 229 ntBASIC3.81□□□□□ -1.8
SNX3O60493 RPS3AP25-201ENST00000411660 793 ntBASIC3.81□□□□□ -1.8
SNX3O60493 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.81□□□□□ -1.8
SNX3O60493 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.81□□□□□ -1.8
SNX3O60493 COX6CP15-201ENST00000426313 211 ntBASIC3.81□□□□□ -1.8
SNX3O60493 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.81□□□□□ -1.8
SNX3O60493 OR51AB1P-201ENST00000429046 620 ntBASIC3.81□□□□□ -1.8
SNX3O60493 AC084290.1-201ENST00000434995 374 ntBASIC3.81□□□□□ -1.8
SNX3O60493 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SNX3O60493 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.81□□□□□ -1.8
SNX3O60493 AL138878.2-201ENST00000440581 1241 ntBASIC3.81□□□□□ -1.8
SNX3O60493 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.81□□□□□ -1.8
SNX3O60493 CEACAMP9-201ENST00000442990 513 ntBASIC3.81□□□□□ -1.8
SNX3O60493 RANP8-201ENST00000444720 713 ntBASIC3.81□□□□□ -1.8
SNX3O60493 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SNX3O60493 AL034418.1-201ENST00000448675 860 ntBASIC3.81□□□□□ -1.8
SNX3O60493 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SNX3O60493 USP9YP25-201ENST00000457708 443 ntBASIC3.81□□□□□ -1.8
SNX3O60493 SNORD11.1-201ENST00000459482 85 ntBASIC3.81□□□□□ -1.8
SNX3O60493 MTCYBP37-201ENST00000510642 1133 ntBASIC3.81□□□□□ -1.8
SNX3O60493 ATG10-208ENST00000513634 618 ntTSL 2 BASIC3.81□□□□□ -1.8
SNX3O60493 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.81□□□□□ -1.8
SNX3O60493 RNU6-1225P-201ENST00000516336 65 ntBASIC3.81□□□□□ -1.8
SNX3O60493 RN7SKP265-201ENST00000516448 223 ntBASIC3.81□□□□□ -1.8
SNX3O60493 IGLVIV-65-201ENST00000517313 360 ntBASIC3.81□□□□□ -1.8
SNX3O60493 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC3.81□□□□□ -1.8
SNX3O60493 AP000676.2-201ENST00000529711 301 ntBASIC3.81□□□□□ -1.8
SNX3O60493 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC3.81□□□□□ -1.8
SNX3O60493 AC135001.1-201ENST00000544546 283 ntBASIC3.81□□□□□ -1.8
SNX3O60493 APPL2-203ENST00000546731 684 ntTSL 2 BASIC3.81□□□□□ -1.8
SNX3O60493 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC3.81□□□□□ -1.8
SNX3O60493 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.81□□□□□ -1.8
SNX3O60493 TRAV15-201ENST00000556680 249 ntBASIC3.81□□□□□ -1.8
SNX3O60493 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC3.81□□□□□ -1.8
SNX3O60493 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC3.81□□□□□ -1.8
SNX3O60493 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC3.81□□□□□ -1.8
SNX3O60493 AC105429.2-201ENST00000610567 517 ntBASIC3.81□□□□□ -1.8
SNX3O60493 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SNX3O60493 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
SNX3O60493 AC107075.1-201ENST00000613695 314 ntBASIC3.81□□□□□ -1.8
SNX3O60493 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.81□□□□□ -1.8
SNX3O60493 AC018445.2-201ENST00000622987 260 ntBASIC3.81□□□□□ -1.8
SNX3O60493 AC073348.1-201ENST00000623002 331 ntBASIC3.81□□□□□ -1.8
SNX3O60493 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC3.81□□□□□ -1.8
SNX3O60493 AC008993.2-201ENST00000631744 806 ntBASIC3.81□□□□□ -1.8
SNX3O60493 MIR4496-201ENST00000635896 61 ntBASIC3.81□□□□□ -1.8
SNX3O60493 MKKS-204ENST00000639674 192 ntBASIC3.81□□□□□ -1.8
SNX3O60493 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SNX3O60493 ZNF33CP-201ENST00000432492 2030 ntBASIC3.81□□□□□ -1.8
SNX3O60493 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
SNX3O60493 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SNX3O60493 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SNX3O60493 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
SNX3O60493 DHX40P1-201ENST00000588725 1412 ntBASIC3.8□□□□□ -1.8
SNX3O60493 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SNX3O60493 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
SNX3O60493 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SNX3O60493 OR4K15-201ENST00000305051 1216 ntBASIC3.8□□□□□ -1.8
SNX3O60493 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.8□□□□□ -1.8
SNX3O60493 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
SNX3O60493 RNU6-1279P-201ENST00000383917 103 ntBASIC3.8□□□□□ -1.8
SNX3O60493 SSXP10-201ENST00000402595 565 ntBASIC3.8□□□□□ -1.8
SNX3O60493 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC3.8□□□□□ -1.8
SNX3O60493 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.8□□□□□ -1.8
SNX3O60493 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.8□□□□□ -1.8
SNX3O60493 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.8□□□□□ -1.8
SNX3O60493 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC3.8□□□□□ -1.8
SNX3O60493 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC3.8□□□□□ -1.8
SNX3O60493 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.8□□□□□ -1.8
SNX3O60493 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.8□□□□□ -1.8
SNX3O60493 HMGB3P8-201ENST00000449709 577 ntBASIC3.8□□□□□ -1.8
SNX3O60493 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.8□□□□□ -1.8
SNX3O60493 RPS3AP53-201ENST00000454716 778 ntBASIC3.8□□□□□ -1.8
SNX3O60493 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC3.8□□□□□ -1.8
SNX3O60493 RPL7L1P8-201ENST00000469911 741 ntBASIC3.8□□□□□ -1.8
SNX3O60493 AC020898.1-201ENST00000474167 787 ntBASIC3.8□□□□□ -1.8
SNX3O60493 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.8□□□□□ -1.8
SNX3O60493 RPS3AP50-201ENST00000487064 803 ntBASIC3.8□□□□□ -1.8
SNX3O60493 AC004453.1-201ENST00000487895 408 ntBASIC3.8□□□□□ -1.8
SNX3O60493 RN7SL810P-201ENST00000493031 276 ntBASIC3.8□□□□□ -1.8
SNX3O60493 RPS4XP14-201ENST00000493072 781 ntBASIC3.8□□□□□ -1.8
SNX3O60493 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.8□□□□□ -1.8
SNX3O60493 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC3.8□□□□□ -1.8
SNX3O60493 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC3.8□□□□□ -1.8
SNX3O60493 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.8□□□□□ -1.8
SNX3O60493 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SNX3O60493 HIGD1AP3-201ENST00000515857 278 ntBASIC3.8□□□□□ -1.8
SNX3O60493 RN7SKP31-201ENST00000516354 278 ntBASIC3.8□□□□□ -1.8
SNX3O60493 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.8□□□□□ -1.8
SNX3O60493 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.8□□□□□ -1.8
SNX3O60493 AC087369.1-201ENST00000520775 996 ntBASIC3.8□□□□□ -1.8
SNX3O60493 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.8□□□□□ -1.8
SNX3O60493 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.8□□□□□ -1.8
SNX3O60493 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.8□□□□□ -1.8
SNX3O60493 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.8□□□□□ -1.8
SNX3O60493 DEFB109D-201ENST00000529497 240 ntBASIC3.8□□□□□ -1.8
SNX3O60493 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.8□□□□□ -1.8
SNX3O60493 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.8□□□□□ -1.8
SNX3O60493 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.8□□□□□ -1.8
SNX3O60493 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 139.4 ms