Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC6.77□□□□□ -1.33
HOXA2O43364 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.77□□□□□ -1.33
HOXA2O43364 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
HOXA2O43364 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
HOXA2O43364 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.77□□□□□ -1.33
HOXA2O43364 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
HOXA2O43364 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
HOXA2O43364 AC005332.9-201ENST00000620266 2921 ntBASIC6.77□□□□□ -1.33
HOXA2O43364 PPWD1-214ENST00000535264 2195 ntTSL 2 BASIC6.76□□□□□ -1.33
HOXA2O43364 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
HOXA2O43364 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.76□□□□□ -1.33
HOXA2O43364 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
HOXA2O43364 PAPPA-AS1-201ENST00000445861 2450 ntBASIC6.76□□□□□ -1.33
HOXA2O43364 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
HOXA2O43364 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
HOXA2O43364 AC009237.3-203ENST00000442128 3551 ntBASIC6.76□□□□□ -1.33
HOXA2O43364 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
HOXA2O43364 RNA5SP110-201ENST00000362638 115 ntBASIC6.76□□□□□ -1.33
HOXA2O43364 RNU1-49P-201ENST00000363468 159 ntBASIC6.76□□□□□ -1.33
HOXA2O43364 Y_RNA.350-201ENST00000365409 98 ntBASIC6.76□□□□□ -1.33
HOXA2O43364 RNU6-1127P-201ENST00000384580 107 ntBASIC6.76□□□□□ -1.33
HOXA2O43364 AL583834.1-201ENST00000406943 343 ntBASIC6.76□□□□□ -1.33
HOXA2O43364 BX682237.1-201ENST00000415016 335 ntBASIC6.76□□□□□ -1.33
HOXA2O43364 AC007562.1-201ENST00000421819 517 ntBASIC6.76□□□□□ -1.33
HOXA2O43364 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC6.76□□□□□ -1.33
HOXA2O43364 NDUFAF4P3-201ENST00000456468 525 ntBASIC6.76□□□□□ -1.33
HOXA2O43364 SNORD97-201ENST00000459187 142 ntBASIC6.76□□□□□ -1.33
HOXA2O43364 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC6.76□□□□□ -1.33
HOXA2O43364 AC023157.2-201ENST00000540596 141 ntBASIC6.76□□□□□ -1.33
HOXA2O43364 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6.76□□□□□ -1.33
HOXA2O43364 AL133153.1-201ENST00000557756 303 ntBASIC6.76□□□□□ -1.33
HOXA2O43364 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC6.76□□□□□ -1.33
HOXA2O43364 AC009120.3-201ENST00000563335 499 ntBASIC6.76□□□□□ -1.33
HOXA2O43364 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC6.76□□□□□ -1.33
HOXA2O43364 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
HOXA2O43364 AC068768.2-201ENST00000602352 343 ntBASIC6.76□□□□□ -1.33
HOXA2O43364 AL355810.1-201ENST00000614629 552 ntBASIC6.76□□□□□ -1.33
HOXA2O43364 AL136313.1-201ENST00000624804 202 ntBASIC6.76□□□□□ -1.33
HOXA2O43364 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
HOXA2O43364 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.76□□□□□ -1.33
HOXA2O43364 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC6.76□□□□□ -1.33
HOXA2O43364 AC024651.2-201ENST00000562480 2098 ntBASIC6.76□□□□□ -1.33
HOXA2O43364 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
HOXA2O43364 AC103710.2-202ENST00000641454 2853 ntBASIC6.76□□□□□ -1.33
HOXA2O43364 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
HOXA2O43364 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
HOXA2O43364 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC6.76□□□□□ -1.33
HOXA2O43364 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.76□□□□□ -1.33
HOXA2O43364 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
HOXA2O43364 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
HOXA2O43364 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.76□□□□□ -1.33
HOXA2O43364 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
HOXA2O43364 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC6.75□□□□□ -1.33
HOXA2O43364 CAST-202ENST00000325674 3356 ntTSL 5 BASIC6.75□□□□□ -1.33
HOXA2O43364 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
HOXA2O43364 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC6.75□□□□□ -1.33
HOXA2O43364 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
HOXA2O43364 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC6.75□□□□□ -1.33
HOXA2O43364 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
HOXA2O43364 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
HOXA2O43364 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
HOXA2O43364 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
HOXA2O43364 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC6.75□□□□□ -1.33
HOXA2O43364 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
HOXA2O43364 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
HOXA2O43364 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
HOXA2O43364 Y_RNA.39-201ENST00000362620 98 ntBASIC6.75□□□□□ -1.33
HOXA2O43364 RNU6-188P-201ENST00000364207 107 ntBASIC6.75□□□□□ -1.33
HOXA2O43364 Y_RNA.473-201ENST00000384333 102 ntBASIC6.75□□□□□ -1.33
HOXA2O43364 Y_RNA.515-201ENST00000384535 112 ntBASIC6.75□□□□□ -1.33
HOXA2O43364 RNU2-23P-201ENST00000410545 195 ntBASIC6.75□□□□□ -1.33
HOXA2O43364 AL358176.3-201ENST00000420757 454 ntBASIC6.75□□□□□ -1.33
HOXA2O43364 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC6.75□□□□□ -1.33
HOXA2O43364 HSFY6P-201ENST00000445573 403 ntBASIC6.75□□□□□ -1.33
HOXA2O43364 HLA-DPA3-207ENST00000454398 229 ntBASIC6.75□□□□□ -1.33
HOXA2O43364 RPL36AP13-201ENST00000457490 317 ntBASIC6.75□□□□□ -1.33
HOXA2O43364 NXT1P1-201ENST00000458481 316 ntBASIC6.75□□□□□ -1.33
HOXA2O43364 DYNLL1P5-201ENST00000467158 270 ntBASIC6.75□□□□□ -1.33
HOXA2O43364 AC092865.4-201ENST00000477936 615 ntBASIC6.75□□□□□ -1.33
HOXA2O43364 RPL38P3-201ENST00000484463 213 ntBASIC6.75□□□□□ -1.33
HOXA2O43364 AP002812.1-201ENST00000495378 474 ntBASIC6.75□□□□□ -1.33
HOXA2O43364 RNA5SP340-201ENST00000517132 107 ntBASIC6.75□□□□□ -1.33
HOXA2O43364 RANP3-201ENST00000530970 276 ntBASIC6.75□□□□□ -1.33
HOXA2O43364 AP001858.2-201ENST00000536213 601 ntBASIC6.75□□□□□ -1.33
HOXA2O43364 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.75□□□□□ -1.33
HOXA2O43364 MIR3614-201ENST00000581261 86 ntBASIC6.75□□□□□ -1.33
HOXA2O43364 AC012443.1-201ENST00000605605 231 ntBASIC6.75□□□□□ -1.33
HOXA2O43364 AC145423.1-201ENST00000605712 336 ntBASIC6.75□□□□□ -1.33
HOXA2O43364 EIF3FP1-201ENST00000613970 806 ntBASIC6.75□□□□□ -1.33
HOXA2O43364 AL590099.1-201ENST00000615276 138 ntBASIC6.75□□□□□ -1.33
HOXA2O43364 AC015967.1-201ENST00000619893 476 ntBASIC6.75□□□□□ -1.33
HOXA2O43364 ZNF33CP-201ENST00000432492 2030 ntBASIC6.75□□□□□ -1.33
HOXA2O43364 AC009120.2-204ENST00000621548 2032 ntBASIC6.75□□□□□ -1.33
HOXA2O43364 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC6.75□□□□□ -1.33
HOXA2O43364 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
HOXA2O43364 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
HOXA2O43364 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
HOXA2O43364 AC133552.1-201ENST00000569988 4007 ntBASIC6.75□□□□□ -1.33
HOXA2O43364 ZNF734P-201ENST00000419494 1534 ntBASIC6.75□□□□□ -1.33
HOXA2O43364 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC6.75□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms