Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 MIR4270-201ENST00000581799 70 ntBASIC4.81□□□□□ -1.64
FOXN3O00409 KPNA2P3-201ENST00000584190 848 ntBASIC4.81□□□□□ -1.64
FOXN3O00409 AL590229.1-201ENST00000603497 542 ntBASIC4.81□□□□□ -1.64
FOXN3O00409 AC087283.1-201ENST00000604029 1074 ntBASIC4.81□□□□□ -1.64
FOXN3O00409 AC024560.3-201ENST00000608482 349 ntBASIC4.81□□□□□ -1.64
FOXN3O00409 AC090425.2-201ENST00000608818 501 ntBASIC4.81□□□□□ -1.64
FOXN3O00409 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.81□□□□□ -1.64
FOXN3O00409 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.81□□□□□ -1.64
FOXN3O00409 PCMTD1P7-201ENST00000634506 357 ntBASIC4.81□□□□□ -1.64
FOXN3O00409 FP325313.1-201ENST00000638228 703 ntBASIC4.81□□□□□ -1.64
FOXN3O00409 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
FOXN3O00409 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
FOXN3O00409 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.8□□□□□ -1.64
FOXN3O00409 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
FOXN3O00409 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
FOXN3O00409 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
FOXN3O00409 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
FOXN3O00409 SNORD82-201ENST00000365530 70 ntBASIC4.8□□□□□ -1.64
FOXN3O00409 RNA5SP88-201ENST00000365560 109 ntBASIC4.8□□□□□ -1.64
FOXN3O00409 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
FOXN3O00409 MIR937-201ENST00000401271 86 ntBASIC4.8□□□□□ -1.64
FOXN3O00409 AL031577.2-201ENST00000404133 280 ntBASIC4.8□□□□□ -1.64
FOXN3O00409 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
FOXN3O00409 OFD1P11Y-201ENST00000418213 1177 ntBASIC4.8□□□□□ -1.64
FOXN3O00409 AC004690.1-201ENST00000418216 328 ntBASIC4.8□□□□□ -1.64
FOXN3O00409 RPL7P30-201ENST00000420888 709 ntBASIC4.8□□□□□ -1.64
FOXN3O00409 ZYG11AP1-201ENST00000430329 837 ntBASIC4.8□□□□□ -1.64
FOXN3O00409 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.8□□□□□ -1.64
FOXN3O00409 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.8□□□□□ -1.64
FOXN3O00409 AC133473.1-201ENST00000455173 299 ntBASIC4.8□□□□□ -1.64
FOXN3O00409 AC026410.2-201ENST00000460281 156 ntBASIC4.8□□□□□ -1.64
FOXN3O00409 RN7SL610P-201ENST00000463845 291 ntBASIC4.8□□□□□ -1.64
FOXN3O00409 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC4.8□□□□□ -1.64
FOXN3O00409 OR5BM1P-201ENST00000512021 366 ntBASIC4.8□□□□□ -1.64
FOXN3O00409 Y_RNA.655-201ENST00000515919 96 ntBASIC4.8□□□□□ -1.64
FOXN3O00409 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.8□□□□□ -1.64
FOXN3O00409 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
FOXN3O00409 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.8□□□□□ -1.64
FOXN3O00409 AC020914.6-201ENST00000594327 272 ntBASIC4.8□□□□□ -1.64
FOXN3O00409 AL160290.3-201ENST00000604869 165 ntBASIC4.8□□□□□ -1.64
FOXN3O00409 AL513477.2-201ENST00000607858 568 ntBASIC4.8□□□□□ -1.64
FOXN3O00409 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC4.8□□□□□ -1.64
FOXN3O00409 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.8□□□□□ -1.64
FOXN3O00409 AL158196.1-201ENST00000616786 434 ntBASIC4.8□□□□□ -1.64
FOXN3O00409 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC4.8□□□□□ -1.64
FOXN3O00409 MIR6891-201ENST00000618788 93 ntBASIC4.8□□□□□ -1.64
FOXN3O00409 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
FOXN3O00409 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
FOXN3O00409 MAPK10-320ENST00000641462 6696 ntBASIC4.8□□□□□ -1.64
FOXN3O00409 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
FOXN3O00409 CR381670.1-201ENST00000624291 1693 ntBASIC4.8□□□□□ -1.64
FOXN3O00409 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
FOXN3O00409 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
FOXN3O00409 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.79□□□□□ -1.64
FOXN3O00409 RNU1-44P-201ENST00000384453 163 ntBASIC4.79□□□□□ -1.64
FOXN3O00409 DHFRP6-201ENST00000401776 268 ntBASIC4.79□□□□□ -1.64
FOXN3O00409 AL603766.1-201ENST00000407763 664 ntBASIC4.79□□□□□ -1.64
FOXN3O00409 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.79□□□□□ -1.64
FOXN3O00409 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC4.79□□□□□ -1.64
FOXN3O00409 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.79□□□□□ -1.64
FOXN3O00409 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
FOXN3O00409 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.79□□□□□ -1.64
FOXN3O00409 AC097262.1-201ENST00000452559 548 ntBASIC4.79□□□□□ -1.64
FOXN3O00409 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.79□□□□□ -1.64
FOXN3O00409 RN7SL41P-201ENST00000476144 297 ntBASIC4.79□□□□□ -1.64
FOXN3O00409 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
FOXN3O00409 AC012158.1-204ENST00000483430 465 ntBASIC4.79□□□□□ -1.64
FOXN3O00409 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.79□□□□□ -1.64
FOXN3O00409 AC008897.1-201ENST00000494006 347 ntBASIC4.79□□□□□ -1.64
FOXN3O00409 RPS6P4-201ENST00000494693 758 ntBASIC4.79□□□□□ -1.64
FOXN3O00409 OR2A20P-203ENST00000498397 1268 ntBASIC4.79□□□□□ -1.64
FOXN3O00409 AC114981.1-201ENST00000503897 678 ntBASIC4.79□□□□□ -1.64
FOXN3O00409 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
FOXN3O00409 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.79□□□□□ -1.64
FOXN3O00409 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC4.79□□□□□ -1.64
FOXN3O00409 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC4.79□□□□□ -1.64
FOXN3O00409 RN7SKP234-201ENST00000517173 224 ntBASIC4.79□□□□□ -1.64
FOXN3O00409 AC104986.1-201ENST00000517978 436 ntBASIC4.79□□□□□ -1.64
FOXN3O00409 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
FOXN3O00409 AC137768.1-201ENST00000549998 553 ntBASIC4.79□□□□□ -1.64
FOXN3O00409 PSMB7P1-201ENST00000556349 514 ntBASIC4.79□□□□□ -1.64
FOXN3O00409 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC4.79□□□□□ -1.64
FOXN3O00409 AC011260.1-201ENST00000578420 472 ntBASIC4.79□□□□□ -1.64
FOXN3O00409 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
FOXN3O00409 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.79□□□□□ -1.64
FOXN3O00409 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC4.79□□□□□ -1.64
FOXN3O00409 OR4G1P-201ENST00000588632 938 ntBASIC4.79□□□□□ -1.64
FOXN3O00409 VN1R92P-201ENST00000598511 928 ntBASIC4.79□□□□□ -1.64
FOXN3O00409 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.79□□□□□ -1.64
FOXN3O00409 AF131215.7-201ENST00000602443 707 ntBASIC4.79□□□□□ -1.64
FOXN3O00409 WISP1-OT1-201ENST00000602893 642 ntBASIC4.79□□□□□ -1.64
FOXN3O00409 AC073114.1-201ENST00000612027 490 ntBASIC4.79□□□□□ -1.64
FOXN3O00409 MIR6780A-201ENST00000615089 68 ntBASIC4.79□□□□□ -1.64
FOXN3O00409 AC009318.4-201ENST00000620496 486 ntBASIC4.79□□□□□ -1.64
FOXN3O00409 MIR6730-201ENST00000622213 67 ntBASIC4.79□□□□□ -1.64
FOXN3O00409 AP001784.1-201ENST00000624107 428 ntBASIC4.79□□□□□ -1.64
FOXN3O00409 AC006065.6-201ENST00000625201 545 ntBASIC4.79□□□□□ -1.64
FOXN3O00409 MIR4496-201ENST00000635896 61 ntBASIC4.79□□□□□ -1.64
FOXN3O00409 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.79□□□□□ -1.64
FOXN3O00409 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms